Dlac012522.1
Basic Information
- Insect
- Drosophila lacertosa
- Gene Symbol
- -
- Assembly
- GCA_004143845.1
- Location
- SCDZ01000074.1:16725-23778[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.6e-12 1.4e-08 34.5 0.0 1 40 307 347 307 350 0.90 2 4 2.5e-14 7.5e-11 41.8 0.1 2 39 362 399 361 402 0.94 3 4 5.8e-18 1.7e-14 53.4 0.0 1 45 416 461 416 461 0.98 4 4 6e-20 1.8e-16 59.8 0.0 1 43 468 511 468 512 0.97
Sequence Information
- Coding Sequence
- atgcgCTTGGGGTTGAGTGCGGCTCTGAGGCtgGGTCTGCTGCGCACCGCGgaacaattgaaaatcaaagGCCTTTGCGAGCCAGCTGAGAATGCGGATGATTTAAATGACGCAGCATCGGCAACAATAACTGTGTCGGAGAACATTCAGCAGGCGGTTGTCGGCAACATTGGCCAACATCAAACATCAATTGTCAGTCTGCAGCAAACGGCTGACGGCAACTATATACCCGTTAGCAGTGCAGGCGACGATTCCGACAGCGATAATAAGCCTCAAAAGATCTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgaCTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTCCTGGACTTCACCCCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACACGTCGATCTCTCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCATTCGATAACGCATCATCACGCAACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAAAGTGAGATCAAGCACGAGCCAGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGaCATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCACTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCAACGACCTTATGGCAGCGTGCTCATCGTCTCGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAATCCTGGAATGAGGATGCACTCCAAAACGCATTGGAGGCTTTGCGTTCGGGCCAAATATCAGCGAATAAAGCATCGAAAGCGTTCGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGTATCCGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTCGGTCAGATGTCCATCAATCAGGCGGCCATACATTATAACCTGCCCTACAGTTCGCTCTACGGACGCTTCAAGCGCGGCAAGTACGACGTGGTGGCAAATACCACAGGCGTCTCGCTGAACAACGCCTCGGGCAACACGACCGGCAGCATTGAGATTATAGAGCATAGTCAGGAGACTTCGttgcatatgttgcagcagcagttccCGTACAGTCCGTCGCCGCATCCACCGACGCCGCAGCACCACAGTACACCGCAGCATCATAGTACGCCGCTGCATCACAGCACGCCGCAGCATCACAGTTCGCAGCAGGGACCGCCGACGCCGCAGGGCATGCAGCAGCATGTAGTGCACATGCAGCAACAGTCGCCGCATCAGGCACACCATCATATGCAACAGGACGTCGTGACATCGAGCAGCCAGCGCAAGAAAGCGACCAAGCAAAAGCGTTGA
- Protein Sequence
- MRLGLSAALRLGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIGQHQTSIVSLQQTADGNYIPVSSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSITHHHATGDESNSNLVQHIKSEIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTTGVSLNNASGNTTGSIEIIEHSQETSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPLHHSTPQHHSSQQGPPTPQGMQQHVVHMQQQSPHQAHHHMQQDVVTSSSQRKKATKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547278; iTF_00514097; iTF_00598802; iTF_01324819;
- 90% Identity
- iTF_00475137;
- 80% Identity
- -