Dspr005257.1
Basic Information
- Insect
- Drosophila sproati
- Gene Symbol
- -
- Assembly
- GCA_018904355.1
- Location
- JAEIFY010000052.1:216553-225225[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.6e-12 1e-08 34.5 0.0 1 40 304 344 304 347 0.90 2 4 2.6e-14 5.6e-11 41.7 0.1 2 39 359 396 358 399 0.94 3 4 5.9e-18 1.3e-14 53.4 0.0 1 45 413 458 413 458 0.98 4 4 6.1e-20 1.3e-16 59.8 0.0 1 43 465 508 465 509 0.97
Sequence Information
- Coding Sequence
- ATGGAAATTTTGCTGATTTGCTTTGTTATCAATTCGATTGTTTTGCAGGGTCTGCTGCGCACCGCGGAACAATTGAAAATCAAGGGTCTCTGTGAGCCGGCTGAGAATGCGGATGATTTAAATGACGCGGCTTTGGCGACAATAACCGGACAGAATCAAACATCGATCGTGAGTCTACAGCAGACGGCAGACGGCAATTATATACCCGTTGGGTCAGCTGGCGACGATTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCAGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCAGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACTCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATGCAACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAGATTGATCCGAGCCAGATTAAGAATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCGAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGACTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGAGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGACGCCCTGCAAAATGCCTTGGAGGCGTTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTATACAAGATTGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATCTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAACACCTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACGCCCTGGTCTGAGGATGCTATGAACGAGGCATTGAACTCGGTGCGCGTTGGTCAAATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGACGATTCAAGCGTGGCAAGTACGATGTGGTTGCCAATACCAGTGGCGTCTCGCTGAACAACACCTCGGGCAATACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCGTCGCCACATCCGCCGACGCCACAGCATCATAGTACGCCGCAGCATCACAGTTCGCAGCAGGGGCCGCCGACGCCGCAGCATATGCAACAGCATCGTCCAAACAGAAGCGTTGAGAAAGCGCCGACGGAGCTCGCTCCGACGGAGCCGAAGACGCCATTGATTGCAGCACCACCAACACCTCCACTGAAGCCGCCACCGCCACCGCCGCCGACGCCGCCGCCGCCGCCGTCATCAAATTTCGCTTCAACTCGAAGCATTGGAAGCGCAAGCTGA
- Protein Sequence
- MEILLICFVINSIVLQGLLRTAEQLKIKGLCEPAENADDLNDAALATITGQNQTSIVSLQQTADGNYIPVGSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSSQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEIDPSQIKNEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHRPNRSVEKAPTELAPTEPKTPLIAAPPTPPLKPPPPPPPTPPPPPSSNFASTRSIGSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530185;
- 90% Identity
- iTF_01324819;
- 80% Identity
- -