Basic Information

Insect: Drosophila cognata
Gene Symbol: bab2
Assembly: GCA_035041535.1
Location: JAWNLC010000451.1:1311972-1314365[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.8e-10 6.2e-07 29.0 0.0 1 44 463 506 463 507 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.8e-10	6.2e-07	29.0	0.0	1	44	463	506	463	507	0.91

Sequence Information

Coding Sequence: ATGGGCGGGCCAACGGCCGTGGCTGGTGGAGGAAGTGGAAGCGGAGCAGGACCTGGCGGCGAGGGGCAAACATATTGCTTGCGCTGGAACAACCATCAGACGAATCTGGTGCAGATCCTGCACACGCTCCACGAGATGGGCAGCTATGTCGACTGCACCCTCGTCGTCGACGACGAACAGTTCAAAGCGCATCGCGTGGTGCTCGCCGCCAACTCGCCCTATTTTCAGGCCATTCTACAGGATGTGGCCCAGGATCAGTGCTGCATCATACTGCCGGGCGTGAAGGGATTCGAGATTGCCGCCCTGCTGCAGTACATGTACACCGGGGAGACGACGGTAACGAAGAGTCAGGAGCCGGAAATCTTGCGCACAGCCAAGGAGCTGCAGGTGAAGGGGCTCTACGACAATCTGATGAAGTTCAACCACAAGGCGCAGAGCAGCGCCGCAGCTGgcgaggagcagcagcgggcACAGCATCAACAGTTCCAGGGCAGCACAAGCCAGTCACATCCACaccatccacatccacatccgcatctgcagccgcagcatctgcagcagcaacagcatcatcatcccAGCTCGAGCAGCAGTTCGAGCAAGCCGCTCAATGGCGCTGGCCAGGATGTGGGCGTTGGCTACCATCATGCGCAGCATCCACATCATAGTCACCATCATTCCTCGTCCGTGATCTCAACGTCCACGCAGCACATCTCGCCCAGCGCCGCCATTTCGAGCAGCTGctcgccaccgccgccaccgttTGGaggcgccgccgccgccgctgccgtcgcagcagctgctgctgcctcatcCGCcggctcctcctcctcgtatCAGACTCCCTATTCAAGTTACCCGAGCGCTGCGGCCATCGCCGCTGGCGATGCACCCCTCACACCCACCCACTCGACGCCCCATCCACATTCAGCTGCTGCCGGCGACGCGGGCAATCAGTGGCCACTTTCCCCctccgccgctgccgccgccatgCTGAACTCCGTCTACGAATCGGCAGCGGACATGAATCCGCTCAAGCGCAAGAAACTCTCGGCCATCTCGAGCATGTTGCTCAACTCGACGCGGGACACGCCCATCCTGCGCAATGTGCTGGCCCAGGCAAACACGGCGGACTCCTCGCAGCCcacgcagcagctgctgctgtcgggCGTCAAGAGTGAGAAGACGCCCAcccatcaacatcagcatgccgctgctgctccacatCCGCACCAtagcagtggcagccacagttTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCACTGTCCCCGCACACGGATCGCTCCTTCGACGAGGAGACGGGCGGTGGCGGCGGACCCGGTGGCAAGAAGCCGGAATGGAAGCGCTACAAGCAATACACCCGGGCGGATATGATGTGCGCGATTCAGTGCGTTCGCGAGGGGATGAGCGCTCTGCAGGCGAGCCGCAAGTTCGGGCTGCCCAGTCGCACGCTATACGACAAGGTGCGCAAGCTGAACATCACCACGGGTCGTGGCACACATCGCACGCCCAAGCGTAGTCCGCCGGGCGGCGTCGAATCCTCGGCAGCGTTTCCCTATTCcgctgcggcggcggcagctgctgcggctgctgcagctgctgcccagAACTACGGCCAGTCGGAGCTGGAGCGGGAGtccaaggagcagcagcagcacggcCAGCACTCGCACCCGCATCACGGCATGCCGCCCACAATTCCACACTCGGCCGCCGCTCTGCTGGATCACGCCTTCCTGCAGCAGGACATGGCTGGCCGCGAGGCGCTGCATGCCATGGCCTTGGCGGCGGCCGCCCACGCGGCAGCCAATCGTATGTCCAACAGTCCGCCTGGCTCGAATGGACATGCGGCATGTCGGTCGCCAAGCCACTAtggcgaggaggaggaggcgtcCACCACGCTGGAGAAGCACGAGCACGACCAGGAGTTGGCGCATCAGCTGGCGCACGAACGTCTGATCAAACGCGAGGCGCTGGAGGAGGAGCGCGACGCGGACGACGAGGATGATCTGCACGATCAGGTGGAGGATCTGTCGCTAGCTGGTCGCAAGGAGCGACCTGAATCGCCTTATTCCCCGCCGCCGGAGAGCGCCGGCGTCATCATGCACTCGGCGGCCACAAATGGCGCCAAGGACGAAACGGAGCTAGCCGACTACAGAGATGTGGActcgccaccaccaccagcaccgccAGTCAGGGATGTGAAACGTGAGCTGCTGGGCAGCGATGAGGCGGCTCTGGCagaggcacaggcacaggcacaggcccAGTATGCAGCGGACTCCAGCCGCGACTCCACCTGCTAG
Protein Sequence: MGGPTAVAGGGSGSGAGPGGEGQTYCLRWNNHQTNLVQILHTLHEMGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVAQDQCCIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAQSSAAAGEEQQRAQHQQFQGSTSQSHPHHPHPHPHLQPQHLQQQQHHHPSSSSSSSKPLNGAGQDVGVGYHHAQHPHHSHHHSSSVISTSTQHISPSAAISSSCSPPPPPFGGAAAAAAVAAAAAASSAGSSSSYQTPYSSYPSAAAIAAGDAPLTPTHSTPHPHSAAAGDAGNQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANTADSSQPTQQLLLSGVKSEKTPTHQHQHAAAAPHPHHSSGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGGGGPGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGVESSAAFPYSAAAAAAAAAAAAAAQNYGQSELERESKEQQQHGQHSHPHHGMPPTIPHSAAALLDHAFLQQDMAGREALHAMALAAAAHAAANRMSNSPPGSNGHAACRSPSHYGEEEEASTTLEKHEHDQELAHQLAHERLIKREALEEERDADDEDDLHDQVEDLSLAGRKERPESPYSPPPESAGVIMHSAATNGAKDETELADYRDVDSPPPPAPPVRDVKRELLGSDEAALAEAQAQAQAQYAADSSRDSTC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00495211; iTF_00501889; iTF_00501729; iTF_00564738; iTF_00564577; iTF_00582886; iTF_00583044; iTF_00513544; iTF_00513384; iTF_00500233; iTF_00552230; iTF_00498795; iTF_00552399; iTF_00500400; iTF_00498963; iTF_00557132; iTF_00557283; iTF_00609805; iTF_00609995; iTF_00576270; iTF_00576429; iTF_00521487; iTF_00597285; iTF_00496522; iTF_00496715; iTF_00597485; iTF_00558806; iTF_00558587; iTF_00521276; iTF_00482157; iTF_00482338; iTF_00573974; iTF_00574148; iTF_00528144; iTF_00527973; iTF_00535409; iTF_00535236; iTF_00570323; iTF_00570477; iTF_00596020; iTF_00595873; iTF_00619765; iTF_00619945; iTF_00516918; iTF_00517072; iTF_00499511; iTF_00499666; iTF_00514103; iTF_00514257; iTF_00522296; iTF_00522096; iTF_00543832; iTF_00543669; iTF_00598808; iTF_00598958; iTF_00485786; iTF_00485941; iTF_00548731; iTF_00548910; iTF_00560379; iTF_00560183; iTF_00593019; iTF_00593203; iTF_00498076; iTF_00498233; iTF_00566716; iTF_00566892; iTF_00497309; iTF_00497493; iTF_00542365; iTF_00542524; iTF_00525246; iTF_00525052; iTF_00518367; iTF_00518523; iTF_00511200; iTF_00511370; iTF_00552960; iTF_00553119;
90% Identity: iTF_00521487;
80% Identity: iTF_00495211;