Dmel003031.2
Basic Information
- Insect
- Drosophila melanosoma
- Gene Symbol
- bab2
- Assembly
- GCA_035042045.1
- Location
- JAWNLY010000049.1:2628943-2631249[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-10 5.4e-07 29.1 0.0 1 44 448 491 448 492 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGGCCAACGGCCGTggctggaggaggaggaggaccTGGCGGCGAGGGGCAAACATATTGCCTGCGCTGGAACAATCACCAGACGAATCTGGTGCAGATCCTGCACACGCTCCATGAGATGGGCAGCTACGTCGACTGCACCCTCGTCGTCGATGATGAACAGTTCAAGGCGCACCGCGTGGTTCTCGCCGCCAATTCACCCTATTTCCAGGCCATCCTGCAGGATGTGGCCCAGGATCAGTGCTGCATCATATTGCCGGGTGTGAAGGGTTTCGAGATTGCCGCACTGCTGCAATACATGTACACCGGCGAGACGACTGTGACCAAGAGTCAGGAGCCGGAAATATTGCGCACAGCCAAGGAACTGCAGGTGAAGGGTCTCTACGACAATCTGATGAAGTTCAACCACAAGGCGCAGAGCAGCGCTGGGAGCGAGGAGCAGCAGCGTGCACAGCATCCACAGTTCCAGAGCAGCACCAGCCAGTCGCATGCACACCCTCATCAGCATCcacatctgcagcagcagcatcagcatcatcatcccACTTCGAGCAGCGGTTCGGGCAAGCCGCTCAATGGCGCTGGCCAGGATGTGGGCGCTGGCTATCATCATGCGCAGCATAGCCATCATAGTCATCATCATTCCTCGTCCGTGATCTCAACGTCTACGCAGCACATCTCGCCCAGCGCCGCCATTTCGAGCAGCTGCTCGCCACCACCGCCACACtttggagcagctgctgccgctgctgcctcCTCGgttgcctcctcctcctcgtatCAGACGCCTTACACAAGTTATCCGAACTCCGCTGCCATCTCCGCTGGCGAGGCACCGCTCACACCCACCCACTCGACGCCTCATCCGCATTCAGCAGCTGCAGGCGACGCGGGCAACCAGTGGCCACTTTCCCCctccgccgctgccgccgcagccATGTTGAACTCTGTCTACGAATCGGCAGCGGACATGAATCCGCTCAAGCGCAAGAAATTGTCGGCCATCTCGAGCATGTTGCTCAACTCGACGCGGGACACACCCATCCTGCGCAATGTTCTGGCTCAGGCAAACTCGGCGGACTCCTCGCAGCCtacgcagcagctgctgctgccgggcGCAAAGAGTGAGGAGAAGACGCCCACCCATCCGCATCAGCATGCCGCTCCTCCACCACATCCGCACCATGGCAGTGGCAGTCACAGTTTCAATGGCTCCGACTACGGCGGCGACAAGGAGCCCCTCTCCCCGCACACTGATCGCTCCTTCGACGATGAGACGGGCGGCAGCGGTGGACCGGGTGGCAAGAAGCCAGAATGGAAGCGCTATAAGCAATACACCCGTGCAGATATGATGTGCGCGATTCAGTGCGTCCGCGAGGGGATGAGCGCCCTGCAGGCGAGCCGCAAGTTCGGATTGCCCAGTCGCACGCTCTACGACAAGGTGCGCAAGCTAAACATCACCACGGGTCGTGGCACACATCGCACGCCCAAGCGCAGTCCACCAGGTGGCGTCGAATCCTCGGCAGCGTTCCCCTATTCcgctgcagcggctgctgcggctgccgctgctgctgcagctgctgcccagAACTATGGTCAGTCGGAGCTGAAGCGGGATTCCAAGGAGCAGCTTGGCCAGCACGGGCATCCGCATCACGGCATGCCGCCCACAATTCCCCACTcggctgctgcgctgctggaTCACGCGTTCCTGCAGCAGGACATGGCTGGCCGCGAGGCGCTGCATGCCATGGCCTTGGCAGCGGCTGCCCATGCGGCAGCCAATCGCATGTCGAACAGTCCGCCGGGCTCCAATGGGCATGCCGCCTGCCGCTCGCCCAGCCACTACGGCGATGAGGAGGAGGCGTCCACTACGCTGGAGAAGCACGATCACGACCAGGAGATGGCGCATGAGCTGGCGCACGAGCGAATGATTAAGCGCGAGGCGCTTGAGGAGGAACGCGATGCGGACGATGAGGATGATCTGCACGACCAGGTGGAGGATCTGTCGCTAGCTGGTCGCAAGGAGCGACCCGAATCGCCCTATTCCCCGCCGCCGGAGAGTGCCGGCGTCATTATGCATTCGGCGGCCACAAATGGCGCCAAGGAGCAAACGGAGCTGGCCGACTACAGAGATTATGCAGCGGACTCCAGTCGCGACTCCATCTACTAG
- Protein Sequence
- MGGPTAVAGGGGGPGGEGQTYCLRWNNHQTNLVQILHTLHEMGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVAQDQCCIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAQSSAGSEEQQRAQHPQFQSSTSQSHAHPHQHPHLQQQHQHHHPTSSSGSGKPLNGAGQDVGAGYHHAQHSHHSHHHSSSVISTSTQHISPSAAISSSCSPPPPHFGAAAAAAASSVASSSSYQTPYTSYPNSAAISAGEAPLTPTHSTPHPHSAAAGDAGNQWPLSPSAAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANSADSSQPTQQLLLPGAKSEEKTPTHPHQHAAPPPHPHHGSGSHSFNGSDYGGDKEPLSPHTDRSFDDETGGSGGPGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGVESSAAFPYSAAAAAAAAAAAAAAAQNYGQSELKRDSKEQLGQHGHPHHGMPPTIPHSAAALLDHAFLQQDMAGREALHAMALAAAAHAAANRMSNSPPGSNGHAACRSPSHYGDEEEASTTLEKHDHDQEMAHELAHERMIKREALEEERDADDEDDLHDQVEDLSLAGRKERPESPYSPPPESAGVIMHSAATNGAKEQTELADYRDYAADSSRDSIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495035;
- 90% Identity
- iTF_00521487;
- 80% Identity
- iTF_00543832;