Basic Information

Gene Symbol
bab2
Assembly
GCA_035042505.1
Location
JAWNLF010000637.1:582889-585369[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-10 6.2e-07 29.0 0.0 1 44 466 509 466 510 0.91

Sequence Information

Coding Sequence
ATGGGCGGTCCAACGGCCGTGGCTGGTGGAGGAAGTGGAATTGGAGCAGCACCTGGCGGCGAGGGGCAGACATACTGCCTGCGCTGGAACAACCATCAGACGAATCTGGTTCAGATTCTGCACACGCTCCACGAGATGGGCAGCTATGTCGACTGCACCCTCGTCGTCGACGACGAACAGTTCAAAGCGCATCGCGTAGTGCTCGCCGCCAACTCGCCCTATTTTCAGGCCATCCTGCAGGATGTGGCCCACGACCAGTGCTGCATCATACTGCCGGGCGTGAAGGGATTTGAGATTGCCGCCCTGCTGCAGTACATGTACACCGGGGAGACGACGGTGACGAAGAGTCAGGAGCCGGAGATATTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGACTCTACGACAATCTGATGAAGTTCAACCACAAGGCGCAGAGCAGCGCCGCAGctggcgagcagcagcagcgggcacAGCATCAACAGTTCCAGGGCAGCACAAGCCAGTCACATCCTCACCATgcacatccacatccgcatatgcagcagcagcatctgcagcagcagcatcatcatcccACCTCGAGCAGCAGTTCGAGCAAGCCGCTCAATGGCGCTGGCCAGGATGTGGGCGTTGGCTACCATCATGCGCAGCATCCACATCATAGTCACCATCATTCCTCGTCCGTGATCTCAACGTCCACGCAGCACTTCTCGCCCAGCGCCGCCATTTCAAGCAGCTGctcgccaccgccgccaccgtTTGGAGGCGCCGCCGCAGCCGCTGCcgtcgcagcagctgctgctgcttcatcCGCcggctcctcctcctcgtatCAGACGCCGTATTCAAGTTACCCGAGCGCCGCGGCCATCTCCGCAGGCGAGGCACCGCTCACGCCCACCACCCACTCGACGCCCCATCCACATTCAGCTGCTGCCGGCGACGCGGGCAATCAGTGGCCACTTTCCCCctccgccgctgccgccgccatgCTGAACTCCGTCTATGAATCGGCAGCGGACATGAATCCGCTCAAGCGCAAGAAACTCTCGGCCATCTCGAGCATGTTGCTCAACTCGACGCGGGACACGCCCATCCTGCGCAATGTGCTTGCCCAAGCAAACACGGCGGACTCCTCGCAGCCcgcgcagcagctgctgctgccgggcGTCAAGAGTGAGAGAGGCGAGAAGACGCCCACCCATCAGCACCAGCATGCCGCTACTGCTCCACATCAGCACCatggcagtggcagccacagctTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCACTATCCCCGCACACGGATCGCTCCTTCGACGAGGAGACGGGCGGCAGCGGCGGACCCGGTGGCAAGAAGCCGGAATGGAAGCGCTACAAGCAATACACCCGGGCGGACATGATGTGCGCGATTCAGTGCGTCCGCGAGGGGATGAGCGCACTACAGGCGAGCCGCAAGTTCGGGCTGCCCAGTCGCACGCTGTATGACAAGGTGCGCAAGCTGAACATCACCACGGGCCGTGGCACACATCGCACGCCCAAGCGTAGTCCGCCGGGCGGCGTCGAATCCTCGGCAGCGTTTCCCTATTccgctgcggcggcggcggcggctgctgcggctgctgcagcagctgcccagAACTACGGTCAGTCGGAGCTGGAGCGGGATTCCAAGGAGCACCTGCAGCATGGCCAGCACTCGCATCCGCATCACGGCATGCCACCCACAATTCCACACTCGGCCGCCGCACTGCTGGATCACGCCTTCCTGCAGCAGGACATGGCTGGCCGCGAGGCGCTGCATGCCATGGCCTTGGCGGCGGCCGCCCACGCGGCAGCCAATCGCATGTCCAACAGTCCGCCGGGCTCGAATGGGCATGCGGCATGCCGCTCGCCCAGCCACTAtggcgaggaggaggaggcgtcCACCACGCTGGAGAAGCACGAGCACGACCAGGAGTTGGCGCATGCGCTGGCTCACGAGCGTCTGATTAAACGCGAGGCTCTGGAGGAGGAGCGCGACGCGGACGACGAGGATGATCTGCACGATCAGGTGGAAGATCTGTCGCTGGCTGGTCGCAAGGAGCGACCCGAATCGCCCTATTCCCCGCCGCCGGAGAGCGCCGGCGTCATCATGCACTCGGCGGTCACAAATGGCGCCAAGGAGGAAACGGAGCTGGCCGATTACAGAGATGTGGACtcaccaccgccaccagcaCCTCCGCCAGTCAGGGATCTGAAACGTGAGCTGCTGGGCAGCGATGAGGCGACTCTGGCAGAGGCAcaggcccaggcccaggcccagTATGCAGCGGACTCCAGCCGCGACTCCATCTACTAG
Protein Sequence
MGGPTAVAGGGSGIGAAPGGEGQTYCLRWNNHQTNLVQILHTLHEMGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVAHDQCCIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAQSSAAAGEQQQRAQHQQFQGSTSQSHPHHAHPHPHMQQQHLQQQHHHPTSSSSSSKPLNGAGQDVGVGYHHAQHPHHSHHHSSSVISTSTQHFSPSAAISSSCSPPPPPFGGAAAAAAVAAAAAASSAGSSSSYQTPYSSYPSAAAISAGEAPLTPTTHSTPHPHSAAAGDAGNQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANTADSSQPAQQLLLPGVKSERGEKTPTHQHQHAATAPHQHHGSGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGSGGPGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGVESSAAFPYSAAAAAAAAAAAAAAAQNYGQSELERDSKEHLQHGQHSHPHHGMPPTIPHSAAALLDHAFLQQDMAGREALHAMALAAAAHAAANRMSNSPPGSNGHAACRSPSHYGEEEEASTTLEKHEHDQELAHALAHERLIKREALEEERDADDEDDLHDQVEDLSLAGRKERPESPYSPPPESAGVIMHSAVTNGAKEETELADYRDVDSPPPPAPPPVRDLKRELLGSDEATLAEAQAQAQAQYAADSSRDSIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00495035;
90% Identity
iTF_00521487;
80% Identity
iTF_00497493;