Dinf002522.1
Basic Information
- Insect
- Drosophila infuscata
- Gene Symbol
- bab2
- Assembly
- GCA_035042205.1
- Location
- JAWNLR010000088.1:1338067-1340436[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-10 6.5e-07 29.1 0.0 1 44 457 500 457 501 0.91 2 2 8.8 1.7e+04 -4.3 0.9 4 18 600 613 600 613 0.76
Sequence Information
- Coding Sequence
- ATGGACGGGCCAACGGCCGTGGCTGGTGGAGGCGGTggcggaggaggagcaggcgGCGAGGGGCAAACATATTGCCTGCGCTGGAACAATCATCAGACGAATCTGGTCCAGATCCTGCACACGCTCCACGAGATGGGCAGCTACGTGGACTGCACCCTCGTCGTTGACGATGAACAGTTTAAGGCGCATCGCGTGGTGCTCGCCGCCAACTCACCCTATTTCCAAGCCATCTTGCAGGATGTGGCCCAGGATCAGTGCTGCATCATCTTGCCGGGTGTGAAGGGATTCGAGATTGCCGCCCTACTCCAGTACATGTACACCGGGGAGACGACGGTGACGAAGAGCCAGGAGCCGGAAATATTGCGCACAGCCAAGGAGCTGCAGGTGAAGGGACTCTACGACAATCTGATGAAGTTCAACCACAAGGCGCAGAGCAGCACTGCAGCTGGCGAGGACCACCAGCGcgcacaacaccaacagttCCAGGGCAGCACCAACCAGTCGCATCCACACCATGCACATCCCCATCAGCACCCAcatcatctgcagcagcaacagcagcagcagcatcatcatcccACCTCGAGCAGCAGTTCAAACAAGCCGCTCAATGGCGCTGGCCAGGATGTGGGCGTTGGCTATCATCATGCGCCGCATCCACATCATAGTCATCATCATTCCTCGTCCGTGATCTCAACGTCCACGCAGCACATCTCGCCCAGCGCCGCCATTTCGAGCAGCTGCtcgccaccaccgccacccTTTGGAGGcaccgctgccgccgccgcagccgcTGCCGCCTCCTCCTCGTATCAGACGCCTTATTCAAGTTATCCGAGCGCCGCTGCAATCTCCGCTGGCGATGCACCGCTGACACCCACCCACTCGACACCTCATCCACATTCGGCTGCTGCCGGCGATGCGGGCAATCAGTGGCCACTTTCCCCCtccgccgctgccgccgccgccatgCTGAACTCTGTCTACGAATCGGCAGCGGACATGAATCCGCTCAAGCGCAAGAAACTCTCGGCCATTTCAAGCATGTTGCTCAACTCGACGCGGGACACGCCCATCCTGCGCAATGTGCTCGCCCAGGCAAACTCGGCAGACTCCTCGCAGCCCGCACAGCAGCTCCTGCTGCCGGGCGTcaaaagagaagagaagacGCCCACCCATCATCACCAGCATGCCGCTTCTACTCCACATCAGCACCATCTCAGTGGCAGCCAGAGTTTCAATGGCTCCGACTACGGGGGCGACAAGGAGCCACTCTCACCGCACACGGATCGCTCCTTCGACGACGAGACGGGCGGCAGCGGTGGACCAGGTGGGAAGAAGCCGGAATGGAAGCGCTACAAGCAGTACACCCGGGCGGACATGATGTGTGCGATTCAGTGCGTCCGCGAGGGGATGAGCGCTCTGCAGGCGAGCCGCAAGTTCGGGCTACCCAGTCGGACGCTGTACGACAAGGTGCGCAAGCTGAACATTACCACGGGCCGTGGCACACATCGCACGCCCAAGCGCAGTCCGCCGGGCGGCGTCGAATCCCCGGCAGCGTTTCCCTATTCcgctgcggcggcggctgccgcggctgctgcagctgctgcccagAACTATGGACAGTCGGAGCTGGAGCGGGATTCCAAggagcatctgcagcagcatgCTCAGCACAGCCAGCACGGGCATCCGCACCATGGCATGCCACCCACAATTCCACACTCAGCCGCCGCTCTGCTGGACCACGCCTTCCTCCAGCAGGACATGGCTGGCCGCGAGGCGCTGCACGCGATGGCTTTGGCGGCCGCCGCCCACGCGGCAGTCAATCGCATGTCCAACAGTCCGCCGGGCTCGAATGGTCATGCGGTATGCCGCTCGCCCAGTCACTAtggcgaggaggaggaggcgccCACGACGCTGGAGAAGCACGAACAAGAGATGGCTCAAGAGCTGGCGCACGAGCGTCTGATTAAGCGCGAGGCGCTGGAGGAGGAGCGCGATGCGGACGATGAGGATGATCTGCACGATCAGGTGGAGGATCTATCGCTAGCTGGCCGCAAGGAGCGACCCGAATCGCCCTATTCCCCGCCGGCGGAGAGTGCCGGCGTCATCATGCATTCGGCGGCCACAAACGGATCCAAGGAGGAAACGGAGCTGGCCGACTACAGAGATGTGAACTCACCGCCATCTGCACCGCCAGTCAGGGATCTGAAACCGGACTCCAGTCGCGACTCCATCTACTAG
- Protein Sequence
- MDGPTAVAGGGGGGGGAGGEGQTYCLRWNNHQTNLVQILHTLHEMGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVAQDQCCIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAQSSTAAGEDHQRAQHQQFQGSTNQSHPHHAHPHQHPHHLQQQQQQQHHHPTSSSSSNKPLNGAGQDVGVGYHHAPHPHHSHHHSSSVISTSTQHISPSAAISSSCSPPPPPFGGTAAAAAAAAASSSYQTPYSSYPSAAAISAGDAPLTPTHSTPHPHSAAAGDAGNQWPLSPSAAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANSADSSQPAQQLLLPGVKREEKTPTHHHQHAASTPHQHHLSGSQSFNGSDYGGDKEPLSPHTDRSFDDETGGSGGPGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGVESPAAFPYSAAAAAAAAAAAAAQNYGQSELERDSKEHLQQHAQHSQHGHPHHGMPPTIPHSAAALLDHAFLQQDMAGREALHAMALAAAAHAAVNRMSNSPPGSNGHAVCRSPSHYGEEEEAPTTLEKHEQEMAQELAHERLIKREALEEERDADDEDDLHDQVEDLSLAGRKERPESPYSPPAESAGVIMHSAATNGSKEETELADYRDVNSPPSAPPVRDLKPDSSRDSIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495035;
- 90% Identity
- iTF_00521487;
- 80% Identity
- iTF_00522296;