Basic Information

Insect: Drosophila paucipuncta
Gene Symbol: bab2
Assembly: GCA_035043875.1
Location: JAWNMP010000282.1:22073140-22075536[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.5e-10 6.1e-07 29.0 0.0 1 44 472 515 472 516 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.5e-10	6.1e-07	29.0	0.0	1	44	472	515	472	516	0.91

Sequence Information

Coding Sequence: ATGGGCGGGCCAACGGCCGTGgctggaggtggaggtggagcagctggagctggagctggagctgtcGGCGAGGGGCAAACCTATTGCTTGCGCTGGAACAATCATCAGACGAATCTGGTGCAGATCCTGCACACACTCCACGAGATGGGCAGCTATGTCGACTGCACCCTGGTCGTCGATGATGAACAGTTCAAGGCGCATCGCGTGGTGCTCGCCGCCAACTCACCCTATTTCCAGGCCATCCTGCAGGACGTGCCCCAGGATCAGTGCTGCATCATATTGCCGGGTGTGAAGGGCTTCGAGATCGCTGCACTGCTGCAGTACATGTACACCGGGGAGACGACGGTGACGAAGAGCCAGGAGCCGGAAATATTGAGGACAGCCAAGGAGCTGCAGGTGAAGGGTCTCTACGACAATCTGATGAAGTTCAATCACAAGGCGCAGAGCAGCTCGTCAGCCAGCGAGGAGCAGCAGCGTGCACAGCATCAACAGTTCCAGGGCAGTCAGTCGcatcatccacatccacatccacatccccatctgcagcagcagcagcagcagcagcagcagcagcatccacatcATCATCCCACATCGAGCATTAGTTCGAGCAAGCCGCTCAATGGCGCTGGCCAGGATGTGGGCGTTGGCTATCATCATGCACCGCATTCGCATCATAGTCATCATCATTCCTCGTCCGTGATCTCAACGTCCACGCAGCACATCTCGCCCAGCGCCGCCATTTCGAGCAGCTGctcgccaccgccgccaccgtttggagcagctgccgccgccgccgcagctgctgctgctgctgcctcctccgcctccgccGCCGCCTCCTCCTCGTATCAGACGCCTTATTCAAGTTATCCCAGCGCCGCTGCCATTTCGGCTGGCGAGGCACCGCTCACGCCCACCCACTCGACGCCACATCCAcattcagctgctgctggggaTGCGGGCAACCAGTGGCCACTTTCCCcctccgccgccgccgccgccgccatgCTGAACTCTGTCTACGAATCGGCAGCGGACATGAATCCGCTCAAGCGCAAGAAACTCTCGGCCATTTCGAGCATGCTGCTCAACTCCACACGGGACACGCCCATCTTGCGCAACGTGTTGGCTCAGGCGAATACGGCGGACTCCTCGCAGccggcgcagcagcagctgctgagcGAGAAGACGCCCAcccatcagcatcagcaccagcatgccgctgcagcagctgctgctgctccacatCCCCATCACGGCAGTGGCAGTCACAGTTTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCTCTCTCGCCGCACACGGATCGCTCCTTCGACGAGGAGACGGGCGGCGTCGGCGGACCAGGCGGCGGCAAGAAGCCGGAATGGAAACGCTACAAGCAATACACCCGGGCGGACATGATGTGTGCGATTCAGTGCGTCCGCGAGGGCATGAGCGCCCTGCAGGCCAGCCGCAAGTTCGGGCTGCCCAGTCGCACGCTGTACGACAAGGTGCGCAAGCTGAATATCACCACGGGGCGTGGCACACATCGCACGCCCAAACGTAGTCCGCCAGGTGGCGTTGAATCCTCCGCTGCGTTTCCCTATTccgctgcggcggcggcggctgctgcggctgctgctgctgccgctgcccaGAACTATGGTCAGTCGGAGCTGGAGCGGGAGTCgaaggagcagcaacagcacggGCAGCATGGTCAGCACGGGCATCCGCATCATGGCATGCCGCCCACAATTCCACACTCGGCTGCCGCCCTGCTGGATCATGCCTTTCTGCAGCAGGACATGGCTGGCCGCGAGGCGTTGCATGCCATGGCtttggcggcagcagcacaCGCGGCAGCCAATCGCATGTCGAGCAGTCCGCCCGGGTCGAATGGACACGCGGCATGCCGCTCACCCAGCCACTAtggcgaggaggaggaggcctCCACGACGCTGGAGAAGCACGAGCACGACCAGGAACTGGAGCGTCTGATTAAGCGCGAGGCGCTGGAGGAGGAGCGCGATGCGGACGATGAGGATGATCTGCACGATCAGGTGGAGGATCTGTCGCTGGCTGGTCGCAAGGAGCGACCAGAATCACCATATTccccgccgccgccgccgccggaGAGTGCTGGCGTCATTATGCATGCGGCGACCACAAATGGCGCCAAGGAGCAAACGGAGCTGGCTGACTACAGAGATGTGGAGTCGCCACCAGCGCCGCCAGTCAGGGATCTGAAGCGTGAGCTGCTGGGCAGCGATGAGGCGACTCTAACCGAGGCACAGGAGGCACAGGCAGACCACGACTCCATCTACTAG
Protein Sequence: MGGPTAVAGGGGGAAGAGAGAVGEGQTYCLRWNNHQTNLVQILHTLHEMGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCCIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAQSSSSASEEQQRAQHQQFQGSQSHHPHPHPHPHLQQQQQQQQQQHPHHHPTSSISSSKPLNGAGQDVGVGYHHAPHSHHSHHHSSSVISTSTQHISPSAAISSSCSPPPPPFGAAAAAAAAAAAAASSASAAASSSYQTPYSSYPSAAAISAGEAPLTPTHSTPHPHSAAAGDAGNQWPLSPSAAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANTADSSQPAQQQLLSEKTPTHQHQHQHAAAAAAAAPHPHHGSGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGVGGPGGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGVESSAAFPYSAAAAAAAAAAAAAAAQNYGQSELERESKEQQQHGQHGQHGHPHHGMPPTIPHSAAALLDHAFLQQDMAGREALHAMALAAAAHAAANRMSSSPPGSNGHAACRSPSHYGEEEEASTTLEKHEHDQELERLIKREALEEERDADDEDDLHDQVEDLSLAGRKERPESPYSPPPPPPESAGVIMHAATTNGAKEQTELADYRDVESPPAPPVRDLKRELLGSDEATLTEAQEAQADHDSIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00495035;
90% Identity: iTF_00570477; iTF_00501889; iTF_00501729; iTF_00564738; iTF_00564577; iTF_00582886; iTF_00583044; iTF_00513544; iTF_00513384; iTF_00557132; iTF_00557283; iTF_00576270; iTF_00576429; iTF_00596020; iTF_00595873; iTF_00516918; iTF_00517072; iTF_00499511; iTF_00499666; iTF_00514103; iTF_00514257; iTF_00598808; iTF_00598958; iTF_00485786; iTF_00485941; iTF_00498076; iTF_00498233; iTF_00542365; iTF_00542524; iTF_00518367; iTF_00518523; iTF_00552960; iTF_00553119;
80% Identity: iTF_00570477;