Deng001877.1
Basic Information
- Insect
- Drosophila engyochracea
- Gene Symbol
- bab2
- Assembly
- GCA_035042385.1
- Location
- JAWNLK010000019.1:13887996-13890374[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-10 5.7e-07 29.0 0.0 1 44 465 508 465 509 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGGCCAACGGCCGTGGCTGGAGGTGGGGGTggaggagctggagctggagctgtcGGCGAGGGGCAAACCTATTGCTTGCGCTGGAACAATCATCAGACGAATCTGGTACAGATCCTGCACACACTCCACGAGATGGGCAGCTATGTTGACTGCACCCTGGTCGTCGACGATGAACAGTTCAAGGCGCATCGCGTGGTGCTCGCGGCCAACTCACCCTATTTCCAGGCCATCCTGCAGGACGTTCCCCAGGATCAGTGCTGCATCATATTGCCGGGTGTGAAGGGTTTCGAGATCGCTGCACTGCTGCAGTACATGTACACCGGGGAGACGACGGTGACGAAGAGCCAGGAGCCGGAAATATTGAGGACAGCCAAGGAGCTGCAGGTGAAGGGTCTCTACGACAATCTGATGAAGTTCAACCACAAGGCGCAGAGCAGCTCGGCAGCCAGCGAGGAGCAGCAGCGTGCACAGCATCAACAGTTCCAGGGCAGTCAGTCGCATCATCCACATCtccatctgcagcagcagcagcagcagcagcagcagcagcatccacatcatcatccCACATCGAGCATTAGTTCGAGCAAGCCGCTCAATGGCGCTGGCCAGGATGTGGGCGTTGGCTATCATCATGCGCCGCATTCGCATCATAGTCATCATCATTCCTCGTCCGTGATCTCAACGTCCACGCAGCACATCTCGCCCAGCGCCGCCATTTCGAGCAGCTGCtcgccaccaccgccaccgtttggagcagctgccgccgccgccgcagctgctgctgctgcctcctccgcctccgccgccgcctcctccTCGTATCAGACGCCTTATTCAAGTTATCCCAGCGCCGCTGCCATTTCGGCTGGCGAGGCACCGCTCACGCCCACCCACTCGACGCCACATCCacattcagctgctgctggggatGCTGGCAACCAGTGGCCACTTTCCCcctccgccgccgccgccgccgccatgcTGAACTCTGTCTACGAATCGGCAGCGGACATGAATCCGCTCAAGCGCAAGAAACTCTCGGCCATTTCGAGCATGCTGCTCAACTCCACGCGGGACACGCCCATCTTGCGCAACGTGTTGGCTCAGGCGAATACGGCGGACTCCTCGCAGccggcgcagcagcagctgctcagcgAGAAGACGCCCACCCATcagcaccaacaccagcatgccgctgcagcagctgctgctgctccacatcCGCATCACGGCAGTGGCAGTCACAGTTTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCTCTCTCGCCGCACACGGATCGCTCCTTCGACGAGGAGACGGGCGGCATCGGCGGACCGGGCGGCGGCAAGAAGCCGGAATGGAAACGCTACAAGCAATACACCCGGGCGGACATGATGTGTGCGATTCAGTGCGTCCGCGAGGGCATGAGCGCCCTGCAGGCCAGTCGCAAGTTCGGGCTGCCCAGTCGCACGCTGTACGACAAGGTGCGCAAGCTGAATATCACCACGGGGCGTGGCACACATCGCACGCCCAAACGTAGTCCGCCAGGTGGCATTGAATCCTCCGCTGCGTTTCCCTATTccgctgcggcggcggcggctgctgcggctgctgctgcagccgctgccCAGAACTATGGTCAGTCGGAGCTGGAGCGGGAGTCgaaggagcagcaacagcacggACAGCATGGTCAGCACGGGCATCCGCATCATGGCATGCCGCCCACAATTCCACACTCGGCTGCCGCTCTGCTGGACCATGCCTTTCTGCAGCAGGATATGGCTGGCCGCGAGGCGTTGCATGCCATGGCTTTGGCGGCAGCAGCCCACGCGGCGGCCAATCGCATGTCGAGCAGTCCGCCCGGGTCGAATGGACACGCGGCATGCCGCTCGCCCAGTCACTAtggcgaggaggaggaggcgtcCACGACGCTGGAGAAGCACGAGCACGACCAGGAGCTGGAGCGTCTGATTAAGCGCGAGGCGCTGGAGGAGGAGCGCGATGCggacgatgaggatgatcTGCACGATCAGGTGGAGGATCTATCGCTGGCTGGTCGCAAGGAGCGACCAGAATCGCCCTATTccccgccgccaccgccgccgccgccgcagccggAGAGTGCTGGCGTCATTATGCATGCGGCGACCACAAATGGCGCCAAGGAGCAGACGGAGCTGGCTGACTACAGAGATGTGGAGTCGCCACCAGCGCCGCCAGTCAGGGATCTGAAACGTGAGCTGCTGGGCAGCGATGAGGCGACTCTAACCGAGGCACAGGCAGACCACGACTCCATCTACTAG
- Protein Sequence
- MGGPTAVAGGGGGGAGAGAVGEGQTYCLRWNNHQTNLVQILHTLHEMGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCCIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAQSSSAASEEQQRAQHQQFQGSQSHHPHLHLQQQQQQQQQQHPHHHPTSSISSSKPLNGAGQDVGVGYHHAPHSHHSHHHSSSVISTSTQHISPSAAISSSCSPPPPPFGAAAAAAAAAAAASSASAAASSSYQTPYSSYPSAAAISAGEAPLTPTHSTPHPHSAAAGDAGNQWPLSPSAAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANTADSSQPAQQQLLSEKTPTHQHQHQHAAAAAAAAPHPHHGSGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGIGGPGGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGIESSAAFPYSAAAAAAAAAAAAAAAQNYGQSELERESKEQQQHGQHGQHGHPHHGMPPTIPHSAAALLDHAFLQQDMAGREALHAMALAAAAHAAANRMSSSPPGSNGHAACRSPSHYGEEEEASTTLEKHEHDQELERLIKREALEEERDADDEDDLHDQVEDLSLAGRKERPESPYSPPPPPPPPQPESAGVIMHAATTNGAKEQTELADYRDVESPPAPPVRDLKRELLGSDEATLTEAQADHDSIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495035;
- 90% Identity
- iTF_00570323;
- 80% Identity
- iTF_00501889;