Dboq004482.1
Basic Information
- Insect
- Drosophila bocqueti
- Gene Symbol
- sip1
- Assembly
- GCA_018151655.1
- Location
- JAECXF010000002.1:1432764-1435457[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-95 2.5e-91 306.1 14.2 3 275 426 693 424 693 0.98 2 2 0.072 6.2e+02 -0.3 0.1 157 195 705 740 698 749 0.65
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAGCGCTTCGAAATCACGGACTACGACCTGGACAATGAGTTCAATATCAACAGGCCCCGCGGACGCCAGAGTCGGCACCAGCAGATCTACGGCATTTGGGCGGACGACAGCGAGGAGGAGAGTGGCGGCGAGGGCGGCAAGCGGAGGGGCCGGTCCGCCCGACAGCCCAAGGACTACACCATGCCGGTGAACTTCGTGGCCGGCGGCATCCAGCAAGCGGGTAAAAAGAAGAAAAAGGCGCTCAAGGCAGAGGACGGTGACGGTGCCGCCAGGGAGGACGGCGGTGAGGCGGACCGTGGTGAGCAGAGCGACGGCTCCTCCGCCAGTGCGCGCCCCGCCTTTGGCGACCAGAGCGATCAGGACAGCTCAAACAGCTCCGCGGAGGAAGAGGAGCGGCCAGCGCTGAGCAGGGGCAAGGGCAAGCCCGGCATCAGCGGCACCACCTTCCAACACCGCTCGCACATCGCCAGCGAGCGAAACGTGGGCGCTTGGGAGCAGCATACGCGCGGCATCGGCGCCAAGCTACTCCTCCAAATGGGCTACGAGCCCGGCAAGGGTCTGGGAAAGGACCTGCAGGGCATATCACAGCCAGTACAGGCTCATGTGCGCAAGGGCAGAGGAGCCATCGGAGCCTATGGGCCGGAGACAGCAGCCAGTGTTGGCGGCCAGACAGCCAAGGCCATCAAGGTGGATGAGGATGTGCGCGAGGCCAAGGAGTTCAAGGAGCAGCTGAACAAGTGGCGCAAGGGAGGCGCCGCTGGGGCCGATGCGCAGGAGCGTCAGGGCAAACGCTACTACTACAAGTCCGTAGAGGAGGTGATCGCCAAGGGGAACAAGTCCAGCCACCTGCTCTCAGAGAAGCTAAGCAAGAAGCTGGGCAACGTCCCAGTAATCGACATGACGGGTCCGGAGAAGCGCGTGCTAAGCGGCTACCATGCCCTGGGCCAGGCCAAAATCACGCCGGAGGAGACGCTGTATGACGCCGACCCGACGGAGAAAGGGGCTCCCACTGCCGTCTCCGTGTTCGCGATGCCCGAGCTGACGCACAACCTGCAGCTCTTGGTCAGCCAGGCCGAGCAGCAGATCATCGCCATCGACAAGCAGGAGCGGGAGTGCTCCAGCCAGCAGGCGGCGCTGGAGAGCGAGCACCGCAAGCTGGAGGAAATCGTGCAGCTGGAACGCAACCACATTCGCACTCTGGAGGAGGCTCTGGACCGGGTGGAGCGTCTGAGCGAGAATCCCGAATTGGAGCTGCCGCAGGCGGAGCGAATCTTTCGGGAGCTGCTCGTGGACTATGCGGCCGAGTTCCAGGAGTTCGGCTTGGCTGACCTGGCGGCTGGCGTGATAGCGCCGCTCCTAAAGCGGGAACTGCTCCACTGGCAACCATTGGAGCACCCAACAGAGCCGCTGCAGATGGTGAAGACTTGGCGGGCAATGCTGCAGCGCGGGGAGCCGGCAGAGCAGCAGCCGCGCAATGTCTTCGACCCGTACTCCTCGCTGATTTGGGCCGGGGTGATGCCATCGTTCCGGACCTGCGCCAGTGCCTGGCAACCCAAGGAACATCCGCCCATGGCAGCTCTGCTCGATGCCTGGGCTCCCCTGCTGCCCACCTGGGTGCTGGACTCTGTGCTGGAGCAGCTGGTGCTGCCGCGCCTGGTAACCGGTGTCCAGGAGTGGGATCCCCTCACCGACACCGTGCCAATAGACAGCTGGGTGCTGCCCTGGCATGCCATCCTGGGTAGCAAGCTGGAGGAGGCCGTCTATCCGCAGATCCGCGGCAAGCTCGGCGAGGCCCTGCGCGCCTGGTCGCCGCAGGATCGCTCGGCCAGGGCCATGCTGACGCCCTGGCAGCAGGCCTTCCCCGAAGAGGAGATGCAGGAGTTCCTGCAGCGTCACATCGTACCGAAACTGCAGCTGACCCTCGCCGAGTTCGTCATCAATCCTCTGCACCAGGACCTGGAACTGTGGCACCAGGTTTGGGAGTGGCACGAGCTCATCGAACCGATGTATATGGCTCAGCTGCTGGACAGGCACTTCTTCCCGCGTTGGATGCAGGTTCTTGTGCTGTGGCTCAATCAGTCGCCCGACTACGCCGAGATATCGCGCTGGTACACCGGCTGGAAGAGCATGCTGAGTGAGCAGGTTATACGCGAGCCAAGCGTTAAGGAGCACCTGCGACGCGCCCTGGAAATGATGCACCGCGCCAGCGACGCTCTCCTTCAGCCCACTATCACGGCCACTCCTCCGCCCCCGATGCCGCCGATGCCGCCGGGCCCAGTTCCGGCGGGTCTCCTGCCCCCCGTCATGATGGTGGACCTGGTACATCAGCCCGCTCAGCTCGAGTTCAAGGAACTAGTCTCCCAGCGCTGTGCTGAGCTGGGCATCATCTTTGCCCCCCTTCCCGGGCGACGGGAGATGGGCAAGCAGATTTATCGCGTGGGCAAGCTTTTTTGCTACATCGATCGCAACGTGTGCATGCTCAGCGATGGAAGCTTCAGCAACTGGCAGCCGGTGGGACTTAACCAGCTCCTGGAACGCTCACAAACGGGTATTATTTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGKRRGRSARQPKDYTMPVNFVAGGIQQAGKKKKKALKAEDGDGAAREDGGEADRGEQSDGSSASARPAFGDQSDQDSSNSSAEEEERPALSRGKGKPGISGTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQTAKAIKVDEDVREAKEFKEQLNKWRKGGAAGADAQERQGKRYYYKSVEEVIAKGNKSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDADPTEKGAPTAVSVFAMPELTHNLQLLVSQAEQQIIAIDKQERECSSQQAALESEHRKLEEIVQLERNHIRTLEEALDRVERLSENPELELPQAERIFRELLVDYAAEFQEFGLADLAAGVIAPLLKRELLHWQPLEHPTEPLQMVKTWRAMLQRGEPAEQQPRNVFDPYSSLIWAGVMPSFRTCASAWQPKEHPPMAALLDAWAPLLPTWVLDSVLEQLVLPRLVTGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRGKLGEALRAWSPQDRSARAMLTPWQQAFPEEEMQEFLQRHIVPKLQLTLAEFVINPLHQDLELWHQVWEWHELIEPMYMAQLLDRHFFPRWMQVLVLWLNQSPDYAEISRWYTGWKSMLSEQVIREPSVKEHLRRALEMMHRASDALLQPTITATPPPPMPPMPPGPVPAGLLPPVMMVDLVHQPAQLEFKELVSQRCAELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDGSFSNWQPVGLNQLLERSQTGII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00593825; iTF_00612801; iTF_00485125; iTF_00617637; iTF_00541062; iTF_00488653; iTF_00478007; iTF_00594539; iTF_00525868; iTF_00569675; iTF_00491502; iTF_00524403; iTF_00613497; iTF_00571886; iTF_00590225; iTF_00480155; iTF_00531643; iTF_00489363; iTF_00533090; iTF_00561747; iTF_00482969; iTF_00609159; iTF_00606298; iTF_00492221; iTF_00527296;
- 80% Identity
- -