Dboc008022.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila bocki
Gene Symbol
sip1
Assembly
GCA_008042715.1
Location
VNJY01008624.1:1427-4134[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-94 8.4e-91 304.2 14.8 3 275 427 694 425 694 0.98
2 2 0.12 9.6e+02 -1.0 0.1 157 194 706 740 699 750 0.62

Sequence Information

Coding Sequence
ATGTCGGACAATGAGTACGAGCGCTTCGAGATCACGGACTACGACCTGGACAATGAGTTCAACATCAACAGGCCCCGCGGACGCCAGAGTCGGCACCAGCAGATCTACGGCATTTGGGCGGATGACAGCGAGGAGGAGAGCGGCGGCGAAGGCGGCAAACGAAGGGGCCGGTCCGCCCGGCAACCCAAGGACTACACCATGCCGGTGAACTTTGTGGCCGGCGGCATCCAGCAGGCGggcaaaaagaagaaaaaggcGCTAAAGCCTGAGGACGACAACAGTGGGGCTAGGGAGGACGGCGGTGAGGCGGATCGCGACGACCAGAGTGATGGCTCCTCGGCCAGTGCACGTCCCGCCTTCGGGGAACAGAGCGATCAGGATAGCTCCAACAGTTCCGAGGAGGAAGAGCGGCCAGCGCTGAGCAGGGGTCAGGGGAaacccagcggcagcagcggcaccaCCTTCTTCCAGCACCGATCGCACATAGCCAGCGAGAGGAATGTGGGAGCTTGGGAACAGCATACGCGCGGCATCGGTGCCAAGCTGCTCCTTCAAATGGGCTACGAGCCTGGCAAGGGATTGGGCAAGGACCTGCAGGGCATTTCACAGCCGGTGCAGGCTCATGTGCGCAAGGGCAGAGGAGCCATCGGAGCCTATGGCCCCGAAACAGCAGCCAGCATCGGCGGCCAGACAGCCAAGGCCATCAAGGTGGACGAGGATGTGCGCGAGGCCAAGGAGTTCAAGGAGCAGCTGAACAAGTGGCGCAAGGGAGGCGCCGCTGGAGCCGATTCTCAGGAGCGTCAGGGCAAACGCTACTACTACAAGTCAGTGGAGGAGGTGATAGCCAAGGGCAACAAGTCCAGCCACCTGCTCTCGGAGAAGCTGAGCAAGAAGCTGGGCAATGTCCCAGTGATCGACATGACGGGGCCGGAGAAGCGAGTGCTCAGCGGCTATCATGCCTTGGGCCAGGCCAAAATCACGCCGGAGGAGACTTTGTATGACGCCGAGTCGACGGAGAAAGGAGCTGCCACGTCCGCTTCCGTGTTTTCGATGCCCGAGCTGACGCACAACCTGCAGCTCTTGGTGAGCCAGGCCGAGCAGCAGATCATCGCCATCGACAAGCAGGAGCGGGAATGCTCCAGCCAGCAGGCGGCGCTGGAGAGCGAGCACCGCAAGCTGGAAGAGATCGTGCAGCTGGAGCGCAACCACATTCGCACCTTGGAGGAGGCACTGGATCGAGTGGAGCGCCTGAGCGAGAATCCCGATCTGGAATTGCCGCAGGCGGAGCGCCTTTTTCGGGAGCTGCTCGTGGACTATGCGGCCGAGTTCCAGGAGTTCGGCTTGGCTGACCTGGCGGCCGGCGTGATAGCGCCACTCCTGAAGCGGGAACTGCTCCACTGGCAGCCGTTGGAGCACCCAACGGAACCGCTGCAGATGGTGAAGACTTGGCGTTCAATGCTGCAGCGCGGGGAGCCGACCGAGCAGCAGCCGCGCAATGTCTTCGATCCGTACTCCTCGCTGATATGGGCCGGGGTGATGCCATCCTTCCGGACCTGCGCCGCTGCCTGGCAGCCCAAGGAGCATCCCCCCATGGCGGCTCTGCTCGATGCCTGGGCTCCCTTGCTGCCCACCTGGGTACTGGACTCTGTGCTGGAGCAGCTCGTGCTGCCGCGCCTGGTGACCGGCGTCCAGGAGTGGGATCCCCTCACCGACACCGTGCCCATAGACAGCTGGGTGCTGCCCTGGCACGCCATCCTGGGTAGCAAGCTGGAGGAGGCCGTCTATCCGCAGATTCGCAGCAAGCTCGGCGAGGCGTTGCGCGCCTGGTCGCCACAGGATCGCTCGGCCAGGGCCATGCTCACGCCCTGGCAGCAGGCCTTCCCCGAAGAGGAGATGCAGGAGTTTCTGCAGCGTCACATTGTACCGAAACTGCAGGCGACCCTCGCCGAGTTTGTCATCAATCCGCTGCACCAGGACCTGGAGCTGTGGCATCAGGTTTGGGAGTGGCACGAGCTGATCGAACCCATGTACATGGCTCAGCTGCTGGACAGGTACTTCTTCCCGCGCTGGATGCAGGTGCTCGTCCTGTGGCTGAATCAGTCGCCCGACTATGCCGAGATATCGCGCTGGTACACCGGCTGGAAGAGCATGCTGAGTGAGCAGATCATCCGCGAGCCAAGCGTCAAGGAGCATCTGCGACGAGCCCTGGAAATGATGCACCGCGCCAGCGACGCTCTTCTTCAGCCTACGATGACGACGGCCACGCCTCCGCCGCCAATGCCGCCGGGTCCCGTTCCGGCGGGTCTCCTGCCGCCCGTCATGATGGTGGACTTGCTGCATCAACCCGCCCAGCTGGAGTTCAAGGAACTCGTCTCCCAGCGCTGCGCCGAGCTGGGCATCATCTTTGCCCCCCTTCCCGGTCGACGGGAGATGGGCAAGCAGATATATCGCGTTGGCAAGCTCTTTTGTTACATCGATCGCAACGTGTGCATGCTTAGCGATGGAAGCTTTAGCAACTGGCAGCCGGTGGGACTTAATCAGCTCCTGGAACGCTCACAGACGGGTGTACTTTGA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGKRRGRSARQPKDYTMPVNFVAGGIQQAGKKKKKALKPEDDNSGAREDGGEADRDDQSDGSSASARPAFGEQSDQDSSNSSEEEERPALSRGQGKPSGSSGTTFFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGQTAKAIKVDEDVREAKEFKEQLNKWRKGGAAGADSQERQGKRYYYKSVEEVIAKGNKSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDAESTEKGAATSASVFSMPELTHNLQLLVSQAEQQIIAIDKQERECSSQQAALESEHRKLEEIVQLERNHIRTLEEALDRVERLSENPDLELPQAERLFRELLVDYAAEFQEFGLADLAAGVIAPLLKRELLHWQPLEHPTEPLQMVKTWRSMLQRGEPTEQQPRNVFDPYSSLIWAGVMPSFRTCAAAWQPKEHPPMAALLDAWAPLLPTWVLDSVLEQLVLPRLVTGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGEALRAWSPQDRSARAMLTPWQQAFPEEEMQEFLQRHIVPKLQATLAEFVINPLHQDLELWHQVWEWHELIEPMYMAQLLDRYFFPRWMQVLVLWLNQSPDYAEISRWYTGWKSMLSEQIIREPSVKEHLRRALEMMHRASDALLQPTMTTATPPPPMPPGPVPAGLLPPVMMVDLLHQPAQLEFKELVSQRCAELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDGSFSNWQPVGLNQLLERSQTGVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00609159;
90% Identity
iTF_00490071;
80% Identity
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