Dser011140.1
Basic Information
- Insect
- Drosophila serrata
- Gene Symbol
- sip1
- Assembly
- GCA_002093755.1
- Location
- NW:316632-319499[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-94 8.8e-91 304.0 15.6 3 275 422 689 420 689 0.98 2 2 0.071 5.1e+02 -0.3 0.1 157 195 701 736 694 745 0.65
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAATACGAACGCTTCGAGATCACGGACTACGACCTGGACAATGTTAACATCAACAGGCCCCGGGGACGCCAAAGTCGACACCAGCAAATCTATGGCATTTGGGCAGACGACAGAGAGGAGAGCGGCGGTGAGGGCGGCAAGCGGAGGGGCCGTTCCGCCCGACAGCCCAAGGATTACACAATGCCGGTGAACTTCGTGGCCGGCGGCATTCAGCAGGCGggtaaaaagaagaaaaaggcGCTCAAAGCTGAGGAAGGCGACGGTGCGACTAAGGAGGACGGCGGAGAGGATCGGGATGACCAGAGCGACGGCTCTTCAGCCAGTGCACGTCCAGCCTTCGGCGACCAGAGCGATCAGGACAGTTCAAATAGCTCCGCTGAGGAAGCAGAGCGACCAGCTCTAAGCAGGGGTCATGGCAAGTCCGGCAGCGGTGGAACCACCTTTCAACATCGCTCGCACATTGCCAGTGAGCGGAATGTGGGAGCTTGGGAGCAGCATACACGCGGAATCGGTGCCAAGTTGCTCCTCCAAATGGGCTACGAACCAGGCAAGGGATTGGGCAAGGACCTACAGGGAATCTCACAACCAGTGCAGGCTCATGTGCGCAAGGGCAGAGGAGCCATCGGAGCCTATGGCCCGGAAACAGCAGCTAGCATCGGCGGACAGGCAGCCAAGGCCATCAAGGTGGACGAGGATGTGCGCGAGGCCAAGGAGTTTAAGGAACTGAACAAGTGGCGTAAGGGAGGCGCCTCTGGAGCCGATACGCAGGATCGACAAGGTAAACGCTACTACTACAAATCGGTAGAGGAGGTGATAGCCAAGGGGAACAAGTCCAGTCACCTGCTTTCGGAGAAGCTAAGCAAGAAGCTGGGCAATGTCCCAGTGATCGATATGACGGGTCCGGAGAAGCGAGTGCTCAGCGGTTATCATGCCTTGGGACAGGCCAAAATCACGCCGGAGGAGACATTGTATGACGCCGACCCGTCGGAGAAAGGAGCTGCCAGTTCCGTTTCCGTGTTTGCAATGCCTGAGCTGACTCACAATTTGCAGCTCTTGGTTAGTCAGGCCGAGCAGCAGATCATTGCCATCGACAAGCAGGAACGGGAGTGTTCCAGCCAGCAGGCAGCGCTGGAGACCGAGCACCGCAAGCTGGAGGAGATTGTGCAGCTGGAGCGCAATCATATACGCACTCTGGAGGAGGCTTTGGACCGAGTTGAGCGTCTGAGCGAGAATCCCGACCTGGAACTGCCCCAGGCGGAGCGGATGTTTCGGGAGCTGCTCGTGGACTATGCGGCCGAGTTCAAGGAGTTCGGCTTGGCTGATCTGGCAGCTGGCGTGATCGCACCGCTTCTGAAGCGGGAGCTGCTCAACTGGCAACCGTTGGAGCACCCAACAGAGCCGCTGCAGATGGTGAAGAATTGGCGGGCCATGCTGCAGCGTGGAGAGCCGGCAGAGCAGCAGCCACGTAATGTTTTTGACCCGTACTCCTCGCTGATTTGGGCCGGGGTGATGCCATCGTTCCGGACCTGCGCCGCAGCCTGGCAGCCCAAGGAGCATCCCCCAATGGCGGCTTTGCTAGATGCCTGGGCCCCCTTGCTGCCCACCTGGGTGCTGGACTCTGTGCTGGAACAGTTGGTGCTGCCGCGTTTGGTGACCGGCGTCCAGGAATGGGATCCCCTCACTGACACCGTGCCCATAGACAGCTGGGTACTGCCCTGGCACGCCATCCTGGGTAGTAAACTGGAGGAGGCCGTCTATCCGCAGATCCGCAGCAAGCTTGGGGAAGCGCTGCGCGCCTGGTTGCCACAGGATCGTTCGGCCAGGGCCATGTTAACGCCTTGGCAGAAGGCCTTCCCCGAAGAGGAGATGCAGGAGTTCCTGCAGCGTCACATCTTACCAAAGCTGCAGTTGACCCTCGCCGAGTTTGTCATTAATCCTCTGCACCAGGACCTGGAGTTGTGGCATCAGGTTTGGGAGTGGCATGAGCTCATTGAACCGATGTACATGGCTCAGCTGCTGGACAGACATTTCTTCCCGCGCTGGATGCAGGTGCTGGTGTTGTGGTTGAATCAGTCTCCTGACTATGCTGAGATATCGCGTTGGTACACCGGCTGGAAGAGCATGCTGAGTGAGCAGGTTATCCGCGAGCCAAGCGTCAAGGAGCACCTACGAAGAGCTCTTGAAATGATGCACCGCGCCAGTGATGCCCTCCTTCAGCCCACTATCACGGCCACACCACCGCCGCCAATGCCACCGGGTCCTGTTCCGACGGGTCTCCTGCCGCCTGTTATGATGGTGGATCTGGTGCATCAACCCGCCCAGCTGGAGTTCAAGGAGCTTGTGTCCCAGCGCTGCGCCGAGCTGGGCATTATCTTTGCTCTTCCCGGCAGACGGGAAATGGGCAAGCAGATTTATCGcgtcggaaagctgttttgttaTATTGATCGCAACGTGTGCATGCTCAGCGATGGAAGCTTTAGCAACTGGCAGCCAGTGGGACTTAACCAGCTACTGGAGCGATCACAAACGGgtatactttaa
- Protein Sequence
- MSDNEYERFEITDYDLDNVNINRPRGRQSRHQQIYGIWADDREESGGEGGKRRGRSARQPKDYTMPVNFVAGGIQQAGKKKKKALKAEEGDGATKEDGGEDRDDQSDGSSASARPAFGDQSDQDSSNSSAEEAERPALSRGHGKSGSGGTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGQAAKAIKVDEDVREAKEFKELNKWRKGGASGADTQDRQGKRYYYKSVEEVIAKGNKSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDADPSEKGAASSVSVFAMPELTHNLQLLVSQAEQQIIAIDKQERECSSQQAALETEHRKLEEIVQLERNHIRTLEEALDRVERLSENPDLELPQAERMFRELLVDYAAEFKEFGLADLAAGVIAPLLKRELLNWQPLEHPTEPLQMVKNWRAMLQRGEPAEQQPRNVFDPYSSLIWAGVMPSFRTCAAAWQPKEHPPMAALLDAWAPLLPTWVLDSVLEQLVLPRLVTGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGEALRAWLPQDRSARAMLTPWQKAFPEEEMQEFLQRHILPKLQLTLAEFVINPLHQDLELWHQVWEWHELIEPMYMAQLLDRHFFPRWMQVLVLWLNQSPDYAEISRWYTGWKSMLSEQVIREPSVKEHLRRALEMMHRASDALLQPTITATPPPPMPPGPVPTGLLPPVMMVDLVHQPAQLEFKELVSQRCAELGIIFALPGRREMGKQIYRVGKLFCYIDRNVCMLSDGSFSNWQPVGLNQLLERSQTGIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00490071;
- 80% Identity
- -