Daur020501.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila auraria
Gene Symbol
sip1
Assembly
GCA_008042615.1
Location
VNJW01002378.1:2028-4733[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-95 1.3e-91 307.2 13.0 3 275 430 697 428 697 0.98
2 2 0.088 9.3e+02 -0.6 0.0 157 198 709 747 702 752 0.65

Sequence Information

Coding Sequence
ATGTCGGACAACGAGTACGAGCGCTTCGAGATTACGGACTACGACCTGGACAATGAGTTCAACATCAACAGGCCCCGCGGACGCCAGAGCCGGCACCAGCAGATCTACGGCATTTGGGCGGACGACAGCGAGGAGGAGAGCGGCGGCGAGGGCGGCAAGCGGAGGGGCCGGTCCGCTCGGCAGCCCAAGGACTACACCATGCCAGTGAACTTCGTGGCCGGCGGCATCCAGCAGGCGggcaaaaagaagaaaaaggcGCTGAAGGCGGAGGACCAGGACGGGAACGCAAAAGATGACGGTGACGGCGGGGAAGCGGACCGAGGAGACCAGAGCGACGGCTCCTCGGCCAGTGCGCGTCCCGCATTCGGTCAGAGCGATCCGGACAGCTCCAACAGCTCCGCGGAGGAAGAGGAACGGCCGGCGCTGAGCAGAGGTCAGGGAAAGCCCGGCATGAGCGGCATCAGCGGCACCGCCTTTCAGCACCGCTCACACATCGCCAGCGAGCGGAATGTTGGCGCCTGGGAGCAGCATACGCGCGGCATCGGCGCCAAGCTGCTCCTCCAAATGGGCTACGAGCCCGGCAAGGGATTGGGCAAGGACCTGCAGGGCATTTCACAGCCGGTGCAGGCTCATGTCCGCAAGGGCAGAGGAGCCATCGGAGCCTACGGGCCGGAAACGGCAGCCAGCATCGGCGGAAAGGCCGCCAAGGCCATCAAGGTGGACGAGGATGTGCGCGAGGCCAAGGAGTTCAAGGAGCAACTGAATAAGTGGCGCAAGGGAGGCGCCGCCGGAGCCGATCCGCAGGAGCGTCAGGGCAAGCGCTACTACTACAAGTCCGTGGAGGAGGTGATTGCCAAGGGGCACAAGTCCAGCCACCTGCTCTCAGAGAAGCTCAGCAAGAAGCTGGGCAACGTCCCAGTAATCGACATGACGGGGCCCGAGAAGCGAGTGCTTAGCGGCTATCATGCCCTGGGCCAGGCCAAGATTACGCCGGAGGAGACGCTGTATGACGCCGAGCCGACGGAGAAGGGAGCAGCCACGGCCGCCTCAGTGTTTGCGATGCCAGAGCTGACTCACAACCTGCAGCTCTTGGTGAGCCAGTCCGAGCAGCAGATCATAGCCATCGACAAGCAGGAGCGGGAGTGCTCCAGCCAGCAGGCGGCGCTGGAGAGCGAGCACCGCAAGCTGGAGGAGATAGTGCAGCTGGAGCGCAACCACATTCGCACCCTGGAGGAGGCTCTGGACCGGGTGGAGCGTCTGAGCGAGAATCCCGAGCTGGAACTGCCGCAGGCCGAGCGGCTCTTTCGGGAGCTGCTTGTTGACTATGCGGCCGAGTTCAAGGAGTTCGGGCTGGCTGACCTGGCGGCCGGCGTGATAGCGCCGCTTCTGAAGAGAGAACTGGCCCACTGGCAGCCGTTGGAGCATCCCACGGAGCCGCTGCAAATGGTGAAGACGTGGCGTGCCATGCTGCAGCGCGGAGAGCcggcggagcagcagccgcgcAATGTCTTCGATCCGTACTCCTCGCTCATTTGGGCCGGCGTGATGCCATCATTCCGGACCTGCGCCGCTGCCTGGCAGCCCAAGGAGCACCCGCCCATGGCAGCTCTTCTCGATGCCTGGGCACCCCTGCTGCCCACCTGGGTACTGGACTCTGTGCTGGAGCAGCTGGTGCTGCCGCGCTTGGTGACCGGCGTCCAGGAGTGGGATCCCCTCACCGACACCGTGCCCATCGACAGCTGGGTGCTGCCCTGGCACGCCATTCTGGGCACCAAGCTGGAGGAGGCCGTCTACCCGCAAATCCGCAGCAAGCTCGGTGAGGCTCTGCGCGCCTGGTCGCCGCAGGATCGCTCGGCCAGGGCCATGCTCACGCCCTGGCAACAGGCCTTTCCTCCCGAGGAGATGCAGGAGTTCCTGCAGCGGCACATCGTGCCGAAGCTGCAGGCGACCCTCGGCGAGTTCGTCATCAATCCGCTGCACCAGGACCTGGAGCTGTGGCACCAGGTGTGGGAGTGGCACGAGCTCATCGAGCCCATGTGCATGGCTCAGCTGCTGGACAGGCACTTCTTCCCGCGCTGGATGCAGGTGCTCGTCCTGTGGCTGAACCAGTCGCCCGACTACGCGGAGATATCGCGCTGGTACACCGGCTGGAAGAGCATGTTGAGCGAGCCACTACTCCGCGAGCCGAGCGTCAAGGAGCACCTGCGACGAGCACTCGACATGATGCACCGCGCCAGCGACGCCCTCCTTCAGCCCACTATCACGGCCACGCCTCCGCCGCCGATTCCGCCGGGCCCGGTTCCGGCGGGCCTCCTGCCGCCCGTGCTGATGGTGGACCTGGGGCACCAGCCCGCCCAGCTGGAGTTCAAGGAGCTTGTTTCCCAGCGCTGCGCCGAGCTTGGCATCATCTTTGCTCCCCTTCCCGGCAGACGGGAGATGGGCAAGCAGATTTATCGCGTCGGCAAGCTCTATTGCTACATCGACCGCAACGTGTGCATGCTCAGCGATGGCAGCTTTAGCAACTGGCAGCCGGTGGCACTTAATCAGCTCCTGGAACGCTCACAAACGGGGATACTTTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGKRRGRSARQPKDYTMPVNFVAGGIQQAGKKKKKALKAEDQDGNAKDDGDGGEADRGDQSDGSSASARPAFGQSDPDSSNSSAEEEERPALSRGQGKPGMSGISGTAFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKAAKAIKVDEDVREAKEFKEQLNKWRKGGAAGADPQERQGKRYYYKSVEEVIAKGHKSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDAEPTEKGAATAASVFAMPELTHNLQLLVSQSEQQIIAIDKQERECSSQQAALESEHRKLEEIVQLERNHIRTLEEALDRVERLSENPELELPQAERLFRELLVDYAAEFKEFGLADLAAGVIAPLLKRELAHWQPLEHPTEPLQMVKTWRAMLQRGEPAEQQPRNVFDPYSSLIWAGVMPSFRTCAAAWQPKEHPPMAALLDAWAPLLPTWVLDSVLEQLVLPRLVTGVQEWDPLTDTVPIDSWVLPWHAILGTKLEEAVYPQIRSKLGEALRAWSPQDRSARAMLTPWQQAFPPEEMQEFLQRHIVPKLQATLGEFVINPLHQDLELWHQVWEWHELIEPMCMAQLLDRHFFPRWMQVLVLWLNQSPDYAEISRWYTGWKSMLSEPLLREPSVKEHLRRALDMMHRASDALLQPTITATPPPPIPPGPVPAGLLPPVLMVDLGHQPAQLEFKELVSQRCAELGIIFAPLPGRREMGKQIYRVGKLYCYIDRNVCMLSDGSFSNWQPVALNQLLERSQTGIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00609159;
90% Identity
iTF_00490071;
80% Identity
-