Dnik010573.1
Basic Information
- Insect
- Drosophila nikananu
- Gene Symbol
- sip1
- Assembly
- GCA_008042635.1
- Location
- VNJV01010733.1:28288-30979[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-94 1.3e-90 304.2 15.7 3 275 426 693 424 693 0.98 2 2 0.051 6.2e+02 0.2 0.1 156 197 704 742 697 751 0.67
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAGCGCTTCGAAATCACGGACTACGACCTGGACAATGAGTTTAATATCAACAGACCCCGCGGACGCCAGAGTCGGCACCAGCAGATCTACGGCATTTGGGCGGATGACAGCGAGGAGGAGAGTGGCGGCGAGGGCGGAAAACGGAGGGGCCGGTCCGCCCGGCAGCCGAAGGACTACACCATGCCGGTGAACTTCGTGGCTGGCGGCATTCAGCAAGCGggtaaaaagaagaaaaaggcgCTCAAGGCAGAGGATGAAGACGGTGCGACTAGGGAGGACGGCGGTGAGGCGGATCGTGGTGACCAGAGCGACGGTTCCTCCGCCAGTGGGCGCCCCGCCTTTGGCGACCAGAGCGATCAGAACAGCTCAAACAGCTCCGCGGAGGAAGAGGAGCGCCCAGCGCTGAGCAGGGGCAAGGGCAAGTCCGGCAGTAGCGGCACCACCTTTCAACACCGCTCGCATATCGCCAGCGAGCGAAACGTGGGCGCTTGGGAGCAGCATACGCGCGGCATCGGCGCTAAACTACTGCTCCAAATGGGCTATGAGCCCGGCAAGGGTTTGGGAAAGGACCTGCAGGGCATATCACAGCCAGTACAGGCTCACGTGCGCAAGGGCAGAGGAGCCATCGGAGCCTATGGGCCGGAAACAGCAGCCAGTATTGGAGGACAGACAGCCAAGGCCATCAAGGTGGACGAGGATGTGCGCGAGGCCAAGGAGTTCAAGGAGCAACTGAACAAGTGGCGCAAGGGAGGCGCCGCTGGAGCCGATTCGCAGGAGCGTCAAGGCAAACGCTACTACTACAAGTCCGTAGAGGAGGTGATCGCCAAGGGGAACAAGTCCAGCCACCTGCTCTCAGAGAAGCTAAGCAAGAAGCTGGGCAACGTCCCAGTAATCGACATGACGGGTCCGGAGAAGCGAGTGCTAAGCGGCTACCATGCTCTGGGCCAGGCCAAAATCACGCCGGAGGAGACGTTGTATGATGCCGACCCGACGGAGAAAGGAGCTCCCACTGCCGTCTCCGTGTTTGCGATGCCCGAGCTGACGCACAACCTGCAGCTCTTGGTGAGCCAGGCCGAGCAGCAGATCATCGCCATCGACAAGCAGGAGCGGGAGTGCTCCAGCCAGCAGGCGGCGCTGGAGAGCGAGCACCGCAAGCTGGAGGAAATCGTGCAGCTGGAACGCAACCACATTCGCACTCTAGAGGAAGCTCTGGACCGGGTGGAGCGTCTGAGCGAGAATCCCGAGTTGGAACTGCCGCAGGCAGAGCGAATCTTTCGGGAGCTGCTCGTGGACTATGCGGCCGAGTTCCAGGAGTTCGGTTTGGCTGACCTGGCGGCTGGCGTAATAGCGCCGCTCCTAAAGCGGGAACTGCTCCACTGGCAGCCATTGGAGCACCCAACAGAGCCGCTGCAGATGGTAAAGACTTGGCGGGCAATGTTGCAGCGCGGGGAGCCGgcagagcagcagccgcgCAATGTCTTCGACCCGTACTCCTCGCTGATTTGGGCCGGGGTGATGCCATCGTTCCGGACTTGCGCCAGTGCCTGGCAACCCAAGCAGCATCCGCCCATGGCAGCTCTGCTCGATGCCTGGGCCCCCTTGCTGCCCACCTGGGTGCTGGACTCTGTGCTGGAACAACTTGTGCTGCCGCGCCTGGTAACCGGTGTCCAGGAGTGGGATCCCCTCACCGACACCGTGCCAATAGACAGCTGGGTCCTGCCCTGGCATGCCATTTTGGGTAGCAAACTGGAGGAGGCTGTATATCCGCAGATCCGCAGCAAGCTCGGCGAGGCCCTGCGCGCCTGGTTGCCGCAGGATCGCTCGGCCAGGGCCATGCTCACGCCCTGGCAGCAGGCCTTCCCTGAAGAGGAGATGCAGGAGTTCCTGCAGCGTCACATCGTACCGAAACTGCAGCTGACCCTTGCCGAGTTTGTCATCAATCCTCTGCACCAGGACCTGGAATTATGGCATCAGGTTTGGGAGTGGCATGAGCTCATCGAACCGATGTATATGGCTCAGCTGCTGGACAGGCACTTCTTTCCGCGTTGGATGCAGGTTCTTGTACTGTGGCTAAATCAGTCACCCGACTATACCGAGATATCGCGATGGTACACCGGCTGGAAGAGCATGCTGAGTGAGCAGGTTATACGCGAGCCAAGCGTCAAGGAGCACCTGCGACGCGCCCTCGAAATGATGCACCGCGCCAGCGACGCTCTACTTCAGCCCACTATCACGGCCACTCCTCCGCCGCCGATGCCGCCGGCCCCTGTGCCGGCAGGTCTCCTGCCCCCCGTCATGATGGTGGACCTGGTACATCAGCCCGCTCAGCTAGAGTTCAAGGAACTTGTCTCCCAGCGCTGTGCTGAGTTGGGCATCATCTTTGCTCCCCTTCCCGGGCGACGGGAGATGGGCAAGCAGATTTATCGCGTAGGCAAGCTTTTTTGCTACATCGATCGCAACGTGTGCATGCTCAGCGATGGAAGCTTCAGCAACTGGCAGCCGGTGGGACTTAACCAGCTCCTGGAACGCTCACAAACGGGTATTCTTTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGKRRGRSARQPKDYTMPVNFVAGGIQQAGKKKKKALKAEDEDGATREDGGEADRGDQSDGSSASGRPAFGDQSDQNSSNSSAEEEERPALSRGKGKSGSSGTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGQTAKAIKVDEDVREAKEFKEQLNKWRKGGAAGADSQERQGKRYYYKSVEEVIAKGNKSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLYDADPTEKGAPTAVSVFAMPELTHNLQLLVSQAEQQIIAIDKQERECSSQQAALESEHRKLEEIVQLERNHIRTLEEALDRVERLSENPELELPQAERIFRELLVDYAAEFQEFGLADLAAGVIAPLLKRELLHWQPLEHPTEPLQMVKTWRAMLQRGEPAEQQPRNVFDPYSSLIWAGVMPSFRTCASAWQPKQHPPMAALLDAWAPLLPTWVLDSVLEQLVLPRLVTGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGEALRAWLPQDRSARAMLTPWQQAFPEEEMQEFLQRHIVPKLQLTLAEFVINPLHQDLELWHQVWEWHELIEPMYMAQLLDRHFFPRWMQVLVLWLNQSPDYTEISRWYTGWKSMLSEQVIREPSVKEHLRRALEMMHRASDALLQPTITATPPPPMPPAPVPAGLLPPVMMVDLVHQPAQLEFKELVSQRCAELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDGSFSNWQPVGLNQLLERSQTGIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00490071;
- 80% Identity
- -