Dbip006493.1
Basic Information
- Insect
- Drosophila bipectinata
- Gene Symbol
- -
- Assembly
- GCA_018153845.1
- Location
- JAECYF010000002.1:18114612-18119935[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.8e-12 1.8e-08 33.8 0.0 1 40 642 682 642 685 0.90 2 4 4.9e-14 9.7e-11 41.1 0.1 2 39 697 734 696 737 0.94 3 4 9.7e-18 2e-14 52.9 0.0 1 45 751 796 751 796 0.98 4 4 1.1e-19 2.3e-16 59.1 0.0 1 43 803 846 803 847 0.97
Sequence Information
- Coding Sequence
- ATGACCACCGAATCTTATGTGAAAAGCTTACAAATTAGACTAATCGTGATCTTCTCCTTGGAATCCTTGCAGGGCCTCTTGCGCACCGCCGAGCAGCTGAAAATCAAAGGACTTTGCGAGACTGCGGAGAACGCGGATGACCTGAACGACGCAGCCACAGCGACGATAACCGTGTCGGAGAACATCCAGCAGGCGGTTGTTGGCAACATAGTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCGCCATCCCCCTAGCCGGACAGCTACTGAGCTCCACGGCCAGCAGTGGCAGCTCTGCCGGCGGACAGTCAGCATCGGGCCTGCAGCCCACGCCTCGCAAGTCGCGGCTCAAGCGATCCAAGTCGCCCGACTTGCAGCTACCCCCCGGCGGATCTAGTTCCGGAGCGGGATCGAGCGGCTCGTCGCAACAGCAACCCCAGCCGGCGCACCACCACTCCCAAACGATTCTCATCCAGGGCCAGAACCAGGCATCCATTGTAAGCCTGCAGCAGACGGCCGACGGCAACTACATACCAGTGTCCGGGAACGGTGACGAATCGGACACCGAGAACGATCACGAGCACGGCGGACAAGGACAAGGACACGGACACGGCGGACACCAGCAGCACGGCGGACACGACCACGAACACTCGCACTCGCATTCGCATCCACACTCGCACGACCACGAGCACGAGAACAAGCCGAACAAGATCTGCAAGACGGAGCAGTCGGTGGCCTCGCCGGCATCCAATTCATCCGGCGCCTCGAACAATGCTGCGGGCGTGAGCGGCGTCACATCCTCCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGTCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTCACGGAACATGTCGATCTGTCCTGCAATCCTAGTACGGACACACGCGATCTATCAAACCCCACCGAACCGCTCGACATAGACAATCACCTGGCCCATCAGATCCACCGGCTCGACCAGTCCCCCATGCACTCCATTTCGCATCACCACGGCGACGAAAGCAACTCCAATCTGGTGCACATCAAGAGCGAGGTGATCGAGGCCAAGCACCTGGCCGCTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCAGCATGGGGGACATGTGTCGCACGCCGATATCGGAGGCGCCACCGTCATGGAGATCGACCCGAGCCAGATCAAGCACGAGCCGGGCATGATCATAACGCCAGAGATTGTCAACATGATGTCCACGGGGCACATGGACATGTACAACTCGGACACGAGCGAGGACTCTATGATGATCGCCAACGGCTCGCCGCACGATCAAAAGGAGCCGCACTACACGAATTTGGATCAGCAGCACGGTGGTCTGGGGGGCAGCGTGTGCGGGCCGGGGCCCGGCGGTGCTGGTGGCGGTGGGGGCATGGGTGGTGGTGCTGGCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACTTTGTGGCAACGCGCTCATCGGCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCCTGGAACGAGGATGCTCTCCAGAATGCTTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTCGGCATCCCCTCCTCGACGCTCTACAAGATCGCCCGGCGGGAGGGCATCCGCCTGGCGGCTCCCTTCAACGCCGCCCCAACCACGTGGACGCCCGATGATCTGGAGCGCGCCTTGGAGGCGATACGGGCGGGCAATACATCGGTCCAGAAAGCCAGTGCTGAGTTTGGCATACCTACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATCGAGCTATCGCGCTCGAATCCAACACCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTATATGGACGCTTCAAGCGCGGCAAGTACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGCCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCCTCGCCGCATCCGCCAACGCCGCAGCATCACAGTACGCCGCAGCACCACAGCACGCCCCAGGGACCACCGACGCCGCAGCACATGCAGCAGCAGCACGTGGTCCACATGCAACAGCAGCAGCAGCAGTCTCCCCATCCGGGACACCATCCGCAACACATGCAACAGGACGTGGTTACATCGAGCAGTCAGGTGGTGCACAGCCAGCAGCAGCAGCTCCAGCAGATCTATCAGCACCACGGAACGCCGGAGCGTAGTTGA
- Protein Sequence
- MTTESYVKSLQIRLIVIFSLESLQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAIPLAGQLLSSTASSGSSAGGQSASGLQPTPRKSRLKRSKSPDLQLPPGGSSSGAGSSGSSQQQPQPAHHHSQTILIQGQNQASIVSLQQTADGNYIPVSGNGDESDTENDHEHGGQGQGHGHGGHQQHGGHDHEHSHSHSHPHSHDHEHENKPNKICKTEQSVASPASNSSGASNNAAGVSGVTSSGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVSMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAHQIHRLDQSPMHSISHHHGDESNSNLVHIKSEVIEAKHLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQHGGHVSHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGLGGSVCGPGPGGAGGGGGMGGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPDDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQGPPTPQHMQQQHVVHMQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00579902; iTF_00494305; iTF_00475856; iTF_00566001; iTF_00588058; iTF_00538878;
- 90% Identity
- iTF_00538878;
- 80% Identity
- -