Dpar013020.1
Basic Information
- Insect
- Drosophila parabipectinata
- Gene Symbol
- -
- Assembly
- GCA_018153455.1
- Location
- JAECYA010000282.1:18133625-18138929[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.5e-12 1.7e-08 33.9 0.0 1 40 610 650 610 653 0.90 2 4 4.7e-14 9.5e-11 41.1 0.1 2 39 665 702 664 705 0.94 3 4 9.3e-18 1.9e-14 52.9 0.0 1 45 719 764 719 764 0.98 4 4 1.1e-19 2.2e-16 59.1 0.0 1 43 771 814 771 815 0.97
Sequence Information
- Coding Sequence
- ATGACCACCGAATCTTATGTGAAAAGCTTACAAATTAGACTAATCCTGATCTTCTCCTTGGAATCCTTGCAGGGCCTCTTGCGCACCGCCGAGCAGCTGAAAATCAAAGGACTTTGCGAGACTGCGGAGAACGCGGATGACCTGAACGACGCGGCCACAGCGACGATAACCGTGTCGGAGAACATCCAGCAGGCGGTTGTGGGCAACATAGTGAATGCCACCATTGTTCCCGGGGCACCCTCGCCATCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCCGGCGGACAGTCAGCATCGGGCCTGCAGCCCACGCCCCGCAAGTCGCGGCTCAAGCGATCCAAGTCGCCCGACTTGCAGCTACCCCCCGGCGGATCTAGTTCCGGAGCGGGATCGAGCGGCTCGCAACAGCAACCCCAGCCGGCGCACCACCACTCGCAAACGATTCTCATCCAGGGCCAGAACCAGGCATCCATTGTAAGCCTGCAGCAAACGGCCGACGGCAACTACATACCAGTGTCCGGGAACGGTGACGAATCGGACACCGAGAACGATCACGAGCACGGCGGACAAGGACACGGACACGGCGGACACCAGCAGCACGGCGGACACGACCACGAACATTCGCACTCGCATTCGCATCCACACTCGCACGACCACGAGCACGAGAACAAGCCGAACAAGATCTGCAAGACGGAGCAGTCGGTGGCCTCGCCGGCATCCAATTCATCCGGCGCCTCGAACAATGCTGCGGGCGTGAGCGGCGTCACATCCTCCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGTCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTCACGGAACATGTCGATCTGTCCTGCAATCCCAGTACGGACACACGCGATCTATCAAACCCCACCGAACCGCTCGACATAGACAATCACCTGGCCCAGCAGATCCACCGGCTCGACCAGTCCCCCATGCACTCCATCTCGCATCACCACGGCGACGAAAGCAACTCCAATCTGGTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGATCGACCCGAGCCAGATCAAGCACGAGCCGGGCATGATCATAACGCCAGAGATTGTCAACATGATGTCCACGGGGCACATGGACATGTACAACTCGGACACGAGCGAGGACTCTATGATGATCGCCAACGGCTCGCCGCACGATCAAAAGGAGCCGCACTACACGAATTTGGATCAGCAGCACGGTGGTCTGGGGGGCAGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACATTGTGGCAACGCGCTCATCGGCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCCTGGAACGAGGATGCTCTCCAGAATGCTTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTCGGCATCCCCTCTTCGACGCTCTACAAGATCGCCCGGCGGGAGGGCATTCGCCTGGCGGCTCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGATGATCTGGAGCGCGCCTTGGAGGCGATACGGGCGGGCAATACATCGGTCCAGAAAGCCAGTGCTGAGTTTGGCATACCTACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATCGAGCTATCGCGCTCGAATCCAACACCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCGGTGCGCGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTATATGGACGCTTCAAGCGTGGCAAGTACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGCCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCCTCGCCGCATCCGCCAACGCCGCAGCATCACAGCACGCCGCAGCACCACAGCACGCCCCAGGGACCACCGACGCCGCAGCACATGCAGCAGCAGCACGTGGTCCACATGCAACAGCAGCAGCAGCAGTCGCCCCACCCGGGACACCATCCGCAACACATGCAACAGGACGTAGTGACATCGAGCAGTCAGGTGGTGCACAGCCAGCAGCAGCAGCTCCAGCAGATCTATCAGCACCACGGAACGCCGGAGCGTAGTTGA
- Protein Sequence
- MTTESYVKSLQIRLILIFSLESLQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGGQSASGLQPTPRKSRLKRSKSPDLQLPPGGSSSGAGSSGSQQQPQPAHHHSQTILIQGQNQASIVSLQQTADGNYIPVSGNGDESDTENDHEHGGQGHGHGGHQQHGGHDHEHSHSHSHPHSHDHEHENKPNKICKTEQSVASPASNSSGASNNAAGVSGVTSSGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVSMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHGDESNSNLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGLGGSQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPDDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQGPPTPQHMQQQHVVHMQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487920;
- 90% Identity
- iTF_00538878;
- 80% Identity
- -