Dana010050.1
Basic Information
- Insect
- Drosophila ananassae
- Gene Symbol
- -
- Assembly
- GCA_017639315.1
- Location
- CM029942.1:18097356-18102486[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9e-12 1.9e-08 33.8 0.0 1 40 656 696 656 699 0.90 2 4 4.9e-14 1e-10 41.0 0.1 2 39 711 748 710 751 0.94 3 4 9.9e-18 2.1e-14 52.9 0.0 1 45 765 810 765 810 0.98 4 4 1.2e-19 2.5e-16 59.0 0.0 1 43 817 860 817 861 0.97
Sequence Information
- Coding Sequence
- ATGGACAATTCTATATTGAAAACGTGTGAACTGTCAGGGGAAGTGCTTAGGGGAGAATCAGGACATCTTGGCCTCTTGCGCACCGCCGAGCAGCTGAAAATCAAAGGACTCTGCGAGACAGCCGAGAACGCCGATGACCTGAACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCCGGCGGACAGTCAGCATCGGGCCTGCAGCCCACGCCCCGCAAGTCGCGGCTAAAGCGTTCCAAGTCACCCGACTTGCAGCTGCCACCCGGCGGAAGCAGTTCCGGAGCGGGATCGAGTGGCTCGTCGCAACAGCAACCACAGCCGGCACACCACCACTCGCAAACGATTCTCATTCAGGGCCAGAACCAGGCCTCCATTGTCAGTCTACAGCAGACGTCCGACGGCAACTACATACCAGTGGGAGCAGCCGGGAACGGTGACGAATCGGACACCGAGAACGATCACGATCACGGACACCAGCAGCACGGCGGACATCCGCACGGACACGACCACGAACACTCCCACGCCCACGCCCACTCCCACTCGCATTCGCATCCACACTCGCACGACCACGACAACGACCACGAGCACGAGAACAAGCCGAACAAGATCTGTAAGACGGAACAGTCGGTGGCCTCGCCGGCATCGAATTCATCCGGCGGCGCCTCGAACAATGCTGCGGGCGTGAGCGGCGTCACATCCTCCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGTCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTCACGGAACATGTCGATCTGTCCTGCAATCCCAGTACGGACACACGCGATCTATCAAACCCCACCGAACCGCTCGATATAGACAATCACCTGGCCCAGCAGATCCACCGGCTCGATCAGTCCCCCATGCACTCCATCTCGCACCACCACGGCGACGAAAGCAACTCCAACCTGGTGCACATCAAGAGCGAGGTGATCGAGGCCAAGCACCTGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGATCGACCCGAGCCAGATAAAGCACGAGCCGGGCATGATCATAACGCCAGAGATTGTCAACATGATGTCCACGGGGCACATGGACATGTACAACTCGGACACGAGCGAGGACTCAATGATGATCGCCAACGGCTCGCCGCACGATCAAAAGGAGCCGCACTACACGAACTTGGATCAGCAGCACGGTGGTCTGGGGGGCAGCGTGTGCGGGCCGGGGCCCGGCGGTGCTGGTGGCGGTGGGGGCATGGGTGGTGGTGCTGGCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACATTGTGGCAACGTGCTCATCGGCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCCTGGAACGAGGATGCACTGCAGAATGCATTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCGTTCGGCATCCCATCCTCGACGCTCTACAAGATCGCCCGGCGGGAGGGCATCCGCCTGGCGGCTCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGATGATCTGGAGCGCGCCTTGGAGGCGATACGGGCGGGAAATACATCGGTCCAGAAAGCCAGTGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATCGAGCTGTCGCGCTCGAACCCCACACCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTCTATGGACGCTTCAAGCGCGGCAAGTACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGCCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCGTCGCCGCATCCGCCAACGCCGCAGCATCACAGCACGCCGCAGCACCACAGCACTCCCCAAGGACCACCGACGCCGCAGCACATGCAGCAGCAGCACGTGGTCCACATGCAACAGCAGCAGCAGCAGCAGTCGCCCCACCCGGGACACCATCCGCAGCACATGCAACAGGATGTGGTGACATCGAGCAGCCAGGTGGTGCACAGCCAGCAGCAGCAGCAGCTCCAGCAGATCTATCAGCACCACGGAACGCCGGAGCGTAGTTGA
- Protein Sequence
- MDNSILKTCELSGEVLRGESGHLGLLRTAEQLKIKGLCETAENADDLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGGQSASGLQPTPRKSRLKRSKSPDLQLPPGGSSSGAGSSGSSQQQPQPAHHHSQTILIQGQNQASIVSLQQTSDGNYIPVGAAGNGDESDTENDHDHGHQQHGGHPHGHDHEHSHAHAHSHSHSHPHSHDHDNDHEHENKPNKICKTEQSVASPASNSSGGASNNAAGVSGVTSSGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVSMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHGDESNSNLVHIKSEVIEAKHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGLGGSVCGPGPGGAGGGGGMGGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPDDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQGPPTPQHMQQQHVVHMQQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487920;
- 90% Identity
- iTF_00538878;
- 80% Identity
- -