Basic Information

Gene Symbol
grh
Assembly
GCA_008042795.1
Location
VNJZ01005445.1:14544-54785[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.02 2.1e+02 1.2 0.6 74 109 593 628 550 665 0.68
2 2 3.9e-63 4e-59 199.8 0.4 24 221 1032 1224 1018 1226 0.94

Sequence Information

Coding Sequence
ATGTCCACATCCACCGCCACAACGAGCGTCATCACGTCCAACGAGCTTTCGCTGTCCCACGGCCACTCGCACGGCCACAATCACGCCCACAATCTTCACCAGCATCCGCACAGTCGCCTGGGAGGCGTTGGGGTGGGAGTAGGAGtcggtgtgggtgtgggtatCCTTAGCGACGCCTCACTGTCGCCCATCCAGCAGGGAAGCGGCGGAAACaacggaggaggcggcggcggaggaggaggcaacaacaacagctcaCCGCTGGCGCCCAACGGCGTGCCGCTCCTGACCACGATGCACCGATCGCCGGACTCGCCGCAGCCGGAGCTGGCCACCATGACGAACGTCAACGTGCTGGACCTGCACACGGACAACTCCAAGCTGTACGACAAGGAGGCCGTCTTCATCTACGAGACGCCCAAGGTGGTGATGCCGCCGGACGGCGGCCCGGGTGGCGGAGGCGGCAGCAATCCCGACGAGGGACATGCCATCGATGCCCGGATTGCCGCCCAAATGAGCAAccagcaggcccagcagcagcagcaacagcagcagcagcagacggagCACCAGCCGCTGGCCAAGATCGAGTTCGATGAGAACCAGATCATCCGCGTCGTTGGCCCGAAtggggagcagcagcagatcatCTCGCGGGAGATCATCAACGGAGAGCATCATATCCTTTCGCGCAACGAGGCCGGCGAGCACATCCTCACGCGGATCGTCAGTGATCCCTCCAAGCTGATGCCAAACGACAATGCGGTGGCCACCGCCATGTACAACCAAGCCCAGAAGATGAACAACGACCATGGCCAGGGCAATGTATACCAGACTTCGCCGCTGCCCCTGGATGCCTCCGTGCTTCACTACAGCGGCGGGAATGACAGCAACGTGATCAAGACGGAGGCGGACATCTACGAGGACCACAAGAAGCATGCGGCTgccgcggcagcagcagcagcagccgccggcgGCGGGTCCATCATCTACACCACCTCCGATCCCAACGGGGTGGTCAAGCAGCTGCCCCACCTGTCCGTGCCCCAGAAACTCGATCCGGACCTGTACCAGACGGACAAGCACATCGATCTGATCTACAACGACGGCAGCAAGACGGTCATCTACTCCACCACGGACCAGAAGGGTCTCGAGATCTACTCGGGCGGCGATATTGGTAGTCTTGTTTCCGACGGCCAAGTGGTCGTCCAGGCTGGACTTCCCTATGCTACGGCCACGGGCGCCGGCGGACAGCCTGTCTACATCGTGGCCGATGGCGCTCTGCCCGCTGGGGTGGAGGAGCATCTGCAGAGGAGAGGCTTCGGCTTGGATCCCCAGAGCGATCCCCATCACCAGGAGCAGCAAGAGCTCCTCCATCACCACTACTACCATCCCAGTGAGCCGGTGAAGGAGCAGGGTCTGGGTTTGATCCATCAGGACCAtcagcaggaacaggaacatCATCAGCACCATCACCTGCAGCATCACCAGATTCCTTTGACCGCCGCTGGCTTGATGCAGGCCGTTGCTGCTGAGATCCAGTTGGgcgagcagcaggagcaactgCCTCCTAATCCTTCGGAGAACAGTGCCTATCCCATCTATAGCTACTATCGGAGTGAAAGCGAGAAGGAGAGCCATGAATCTTCGACAGGTGACATGGCCTGGAGcggCAAGCTCAATGGCCAGACCACGCCCATCGATGTCTCTGGACTGTCACAGAACGAGATCCAGGGCTTTCTCCTTGGCTCCCATCCCTCGTCTTCGGCGACGGTCACCACAACCGGCGTGGTCTCCACCACGACGATCTCgcatcatcaacaacaacagcaacagcagcagcaacaacaacagcagcagcaacaccagcagcaacagcagcaacatcccGGCGACATTGTCAGTGCCGCTGGCGTTGGCAGCGCGGGCTCAATTGTTTCCAGTGCagttcagcagcagcaacagcaacagcagctaaTTAGCATCAAGCGAGAGCCCGAGGACTTGCGCAAGGATCCCAAGAATGGCAACATTGCCGGTGCAGCGGCAGCCAATGGAGCGGGCTCGGTCATAACGCAAAAGATCTTGCACGCAAGTGAAGCTGATAGgcccagcaccaccaccagcgaCAGCGATTCGGAAGCAGGATCTGGCTTAGGATCCCCCGGAAGCATCACACCCACAACACCACCAGCACAGCTCCTCTCCCCCAGCACAGCGATGTATGCGACCACGGGCGGCACACAGATCTACCTACAGACCTCACATCCCAGCGCGGCGAGCGGAGCGGGCGGTGGCGCCGGACCCACAGGAGCTGCCGGCGGTGGCGTCTCCCTGCAGGCGCAGAGCCCCAGTCCCGGTCCCTACATCACAGCCAATGACTATGGAATGTATACGGCCAGCCGCCTGCCGCCAGGACCCCCgcccaccagcaccagcaccttCATTGCGGAGCCCTCCTACTACCGGGAGTACTTTGCGCCGGACGGCCAAGGCGGCTATGTGCCGGCCAGTACGCGTTCCCTCTACGGGGATGTGGATGTGTCCGTGTCACAGCCCGGCGGAGTGGTTACCTATGAGGGCCGCTTTGCCGGCAGCGTTCCCCCGCCCGCCACCACCACAGTGCTGACCAGCAGCctgcaccaccagcagcagcagcagcagccacagcaccaccagcagcaccaacagcaacagcagcagcagcatcatccacatccgcatccacaGGATGGAAAGAGCAATGGAGGAGCCACGCCCCTGTATGCCAAGGCCATCACGGCGGCGGGTCTCACGGTGGACCTGCCCAGTCCTGATTCGGGCATTGGAACGGATGCCATCACTCCGCGGGATCAGACCAACATCCAACAGTCCTTCGATTACACGGAGCTGTGTCAGCCCGGCACCCTAATCGATGCCAATGGCAGCATACCCGTGAGTGTAAACAGCATCCAGCAGCGGACAGTGGTCCATGGGAGTCAGAACAGTCCCACGACCTCGCTGGTGGATACGAGCACGAATGGATCGACGCGATCGCGGCCCTGGCATGACTTTGGGCGCCAGAATGATGCCGACAAAATTCAAATACCAAAAATCTTCACAAATGTGGGCTTCCGCTATCACCTGGAGAGCCCCATCAGCTCATCGCAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGAATAACGCTGGAGTATGTGCATGATGCGGACAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTCGTTGGATGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAGaTCAACATTGCGGTTCAGTGCCTGAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGGGATGCGGCGGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCTGAGCGCAAGACCCGCGACGAGGAGCGACGGGCGGCCAAGCGCAAGATGACGGCAACGGGCAGAAAGAAGCTGGACGAGCTGTACCATCCGGTGACGGATCGGTCCGAGTTCTATGGCATGCAGGACTTCGCCAAGCCACCGGTGCTATTCTCGCCCGCCGAGGACATGGAGAAGGTAGGTCAGCTGGGCATTGGCACTGGCACTACAACTGGCATGACATTCAACCCCATGAGCAACggcaactccaactccaactcgcACTCGTCCTTGCAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCATTCCTGCTCCATGGCCAGAAGGTGGCAACGCCGACGCTCAAGTTCCACAATCATTTTCCGCCCGACATGCAGACCGATAAGAAGGACCACATCCTGGACCAGAACATGCTGACCAGCACACCCCTGACCGACTTTGGTCCGCCCATGAAGCGCGGCCGGATGACGCCGCCCACCTCGGAGCGGGTGATGCTGTACGTCCGGCAGGAGAACGAGGAGGTCTACACTCCCCTGCACGTGGTTCCACCCACCACGATCGGCCTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGAGCATAAATAACATATATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGACATGATTTCGTTCTACTGCAACGAAGACATCTTCCTGCTGGAGGTGCAACAGATCGAGGACGATCTGTACGATGTGACGCTGACGGAGCTGCCCAATCAGTAG
Protein Sequence
MSTSTATTSVITSNELSLSHGHSHGHNHAHNLHQHPHSRLGGVGVGVGVGVGVGILSDASLSPIQQGSGGNNGGGGGGGGGNNNSSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDNSKLYDKEAVFIYETPKVVMPPDGGPGGGGGSNPDEGHAIDARIAAQMSNQQAQQQQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHGQGNVYQTSPLPLDASVLHYSGGNDSNVIKTEADIYEDHKKHAAAAAAAAAAAGGGSIIYTTSDPNGVVKQLPHLSVPQKLDPDLYQTDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATATGAGGQPVYIVADGALPAGVEEHLQRRGFGLDPQSDPHHQEQQELLHHHYYHPSEPVKEQGLGLIHQDHQQEQEHHQHHHLQHHQIPLTAAGLMQAVAAEIQLGEQQEQLPPNPSENSAYPIYSYYRSESEKESHESSTGDMAWSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSATVTTTGVVSTTTISHHQQQQQQQQQQQQQQQHQQQQQQHPGDIVSAAGVGSAGSIVSSAVQQQQQQQQLISIKREPEDLRKDPKNGNIAGAAAANGAGSVITQKILHASEADRPSTTTSDSDSEAGSGLGSPGSITPTTPPAQLLSPSTAMYATTGGTQIYLQTSHPSAASGAGGGAGPTGAAGGGVSLQAQSPSPGPYITANDYGMYTASRLPPGPPPTSTSTFIAEPSYYREYFAPDGQGGYVPASTRSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPATTTVLTSSLHHQQQQQQPQHHQQHQQQQQQQHHPHPHPQDGKSNGGATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQLGIGTGTTTGMTFNPMSNGNSNSNSHSSLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2