Basic Information

Gene Symbol
grh
Assembly
GCA_037075245.1
Location
JBAMCH010000014.1:28036515-28071316[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-63 4.2e-59 199.7 0.6 24 221 996 1188 982 1190 0.93

Sequence Information

Coding Sequence
ATGTCCACATCCACCGCCACAACGAGCGTAATCACGTCCAACGAGCTCTCGCTgtccggccacgcccacggtCACGGTCACGCCCACCAACTGCACCACCACAGCCACAATCGCCTTGGAGTGGGCGTGGGTGTGGGAATCCTCAGTGACGCCTCCCTTTCGCCCATCCAAcagggcagcggcagcggcggcggcggcggcgggggcaacaacaacacctcACCACTGGCGCCCAACGGAGTGCCACTGCTGACCACAATGCATCGATCGCCGGACTCACCGCAGCCGGAATTGGCCACCATGACGAATGTGAATGTCCTGGATCTGCACACGGACAACTCCAAGTTGTACGACAAGGAGGCCGTCTTTATCTATGAGACGCCCAAGGTGGTAATGCCGCCGGATGGCAATAATTCGGATGAAGGTCATGCCATCGATGCTCGGATTGCGGCCCAAATGGGCAACCAggcacagcaacagcagcagcagcaacaacagcagcagcaggcggaaCACCAGCCGCTGGCCAAGATCGAGTTCGATGAGAACCAGATAATCCGGGTGGTGGGACCGAAtggcgagcagcagcagatcaTCTCGCGGGAGATCATCAACGGGGAGCATCACATCCTGTCGCGCAACGAGGCTGGCGAGCACATCCTCACCCGCATCGTAAGCGATCCCTCCAAGCTGATGCCCAATGACAATGCGGTGGCCACGGCCATGTACAATCAGGCGCAGAAGATGAACAACGACCATGGGCAGGCTGTGTACCAGACTTCGCCCCTGCCGCTGGACGCCTCTGTGCTGCACTTTAGCGGTGGGAATGACTCGAATGTGATCAAGACGGAGGCTGACATCTACGAGGATCACAAAAAGCATGCGGCTGCCGCAGCTGCAGCCGGTGGTTCCATCATCTACACCACCTCGGATCCGAATGGCGTGAATGTGAACGTGAAGCAGCTGCCCCATTTGGCGGTGCCCCAGAAGCTCGATCCCGACCTCTATCAGTCCGACAAGCACATAGATCTGATCTACAACGACGGCAGCAAGACGGTGATCTACTCCACCACGGATCAGAAGGGACTGGAGCTGTACTCGGGCGGCGACATCAGCAGCCTGGTGTCCGATGGCCAAGTGGTGGTCCAGGCGGGAATGCCGTATGCCACCACCACGGGAGCCGGCGGACAGCCCGTCTACATTGTGGCCGACGGTGCCTTGCCAGCGGGAGTCGAGGAGCATCTGCAGAGGCGAGGCTTCAGCTTGGATTCGCTGCATTCGGGTCATGTGGAGAGCGAtccccagcagcaggagcaccaGCTCCTTCATCACTACTACAATCACAGCGATCCTGTGAAGGATCAGGGATTAGGCCTGCCTTTGAGCCACCATTCCCAggatcatcatcagcatccgCAGAGTCATCACCTCACTGCTGCCGGCTTAATGCAGGCAGTGGCTGCGGAGATCCAGTTGAACGGGGATCAGGAGCCACTGGCCCATCCACATGCCACCCCCTCCCAAAATAGTCCCTATCCAGTGTATAGTTATTATCGCAGCGAGGGCGAAAAGGAGAACCATGGATCAACTGGTGCTACCGATCTACCCTGGAGCAGTGGAAAGCTCAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATCGCAAAATGAGATTCAAGGCTTTCTGCTCGGCTCACACACCTCGTCGTCGGCGACGGTCACCACAACCGGCGTTGTCTCCACGACAACGATCTcgcatcaccagcagcagcaacagcagcaacaccagcagcagcagcaacatcccgGCGATATTGTTAGTGCCGCTGGCGTGGGGAGCGCGGGCTCAATTGCCTCCTCTGcggcgcaacagcagcaactaaTTAGCATCAAACGAGAGCCCGAAGACTTGCGCAAGGATCCTAAGAATGGCAACATTGCcggtgcaacaacaacaaacggaCCGGGTTCGGTCATAACGCAAAAGATCTTGCACGTGGATGCACCAGCGGCAAGTGAAGCTGATAGGCCCAGCACACCCAGCAGTACCAGCAGTGAATCGCAGCCAGGATCAGGACTAGGATCGCCGGGAGCCAGGACGACAGCCGGACTAGAGATGTATGCAACCACGGGCGGCACACAGATCTACCTACAGACCTCACATCCCAGCACGGCGAGCGGAGCGGGCGGTGGTGCCGGTCCAGCTGGAGCAgccggtggcggcggcggcgccgGTGGTGTCTCGATGCAGGCGCAGAGTCCCAGTCCGGGTCCCTATATCACGGCCAATGACTATGGCATGTACACGGCCAGTCGCCTGCCACCCGGTCCCCCgcccaccagcaccaccacatTCATTGCGGAGCCCTCCTACTATCGGGAATACTTTGCACCCGACGGCCAGGGCGGCTATGTGCCGGCCAGCGCGAGATCTTTGTACGGCGACGTGGATGTCTCTGTGTCGCAGCCCGGCGGAGTGGTCACCTATGAGGGCCGCTTTGCCGGCAGCGTTCCCCCGCCCGCCACCACCACAGTGCTCACCAGTGTGCACCaccatcaccagcagcagcagcagcaacagcagcagcaccaccagcagcaacagcaacaccatcCGCAGGATGGGAAGAGCAATGGGGGAGCCACGCCCCTCTACGCCAAAGCCATCACGGCGGCGGGTCTCACGGTGGATCTACCAAGTCCGGATTCGGGCATTGGCACGGATGCCATCACACCGCGGGATCAGACGAATATCCAACAGTCCTTCGATTACACGGAGCTGTGTCAGCCGGGCACGTTGATCGATGCCAATGGCAGCATACCCGTCAGCGTAAACAGCATCCAGCAGCGGACGGTGGTCCATGGCAGCCAGAACAGCCCCACCACCTCCCTGGTGGACACCAGCACCAATGGATCCACGCGATCGCGGCCCTGGCACGACTTTGGCCGTCAGAATGATGCcgacaaaatacaaataccaaaaatCTTCACAAACGTGGGCTTCCGATATAACCTGGAGAGCCCCATCAGCTCATCGCAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTACGGAATAACGCTGGAGTATGTGCACGATGCGGAAAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGCCTCGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTTCAGTGCTTGAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGACGGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAACGCAAGACGCGCGACGAGGAGCGACGGGCCGCCAAGCGAAAGATGACAGCAACGGGCAGAAAGAAGCTGGACGAGCTGTACCATCCGGTGACGGATCGGTCCGAGTTCTATGGCATGCAGGACTTTGCCAAGCCGCCGGTGCTGTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCGTTCCTGCTCCATGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAACCACTTTCCGCCCGACATGCAGACCGATAAGAAGGACCACATACTGGACCAGAACATGCTGACCAGCACACCCCTGACCGACTTTGGTCCGCCGATGAAGCGCGGCCGGATGACGCCGCCCACCTCGGAGCGTGTGATGTTGTATGTGCGGCAGGAGAACGAGGAAGTCTACACGCCCCTCCACGTGGTCCCACCCACCACGATCGGCCTGCTGAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatttatcgCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGACATGATATCGTTCTACTGCAACGAGGACATCTTCCTGCTGGAGGTGCAACAGATCGAGGACGACCTGTACGATGTGACGCTCACGGAGCTGCCAAATCAGTAG
Protein Sequence
MSTSTATTSVITSNELSLSGHAHGHGHAHQLHHHSHNRLGVGVGVGILSDASLSPIQQGSGSGGGGGGGNNNTSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDNSKLYDKEAVFIYETPKVVMPPDGNNSDEGHAIDARIAAQMGNQAQQQQQQQQQQQQAEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHGQAVYQTSPLPLDASVLHFSGGNDSNVIKTEADIYEDHKKHAAAAAAAGGSIIYTTSDPNGVNVNVKQLPHLAVPQKLDPDLYQSDKHIDLIYNDGSKTVIYSTTDQKGLELYSGGDISSLVSDGQVVVQAGMPYATTTGAGGQPVYIVADGALPAGVEEHLQRRGFSLDSLHSGHVESDPQQQEHQLLHHYYNHSDPVKDQGLGLPLSHHSQDHHQHPQSHHLTAAGLMQAVAAEIQLNGDQEPLAHPHATPSQNSPYPVYSYYRSEGEKENHGSTGATDLPWSSGKLNGQTTPIDVSGLSQNEIQGFLLGSHTSSSATVTTTGVVSTTTISHHQQQQQQQHQQQQQHPGDIVSAAGVGSAGSIASSAAQQQQLISIKREPEDLRKDPKNGNIAGATTTNGPGSVITQKILHVDAPAASEADRPSTPSSTSSESQPGSGLGSPGARTTAGLEMYATTGGTQIYLQTSHPSTASGAGGGAGPAGAAGGGGGAGGVSMQAQSPSPGPYITANDYGMYTASRLPPGPPPTSTTTFIAEPSYYREYFAPDGQGGYVPASARSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPATTTVLTSVHHHHQQQQQQQQQHHQQQQQHHPQDGKSNGGATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00479938;
90% Identity
iTF_00578291;
80% Identity
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