Basic Information

Gene Symbol
grh
Assembly
GCA_014170255.2
Location
CM024335.1:2448893-2489623[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2e-30 1.9e-26 92.7 0.1 24 148 1008 1127 995 1130 0.92
2 2 3.5e-17 2e-13 50.1 0.2 169 221 1130 1181 1127 1183 0.92

Sequence Information

Coding Sequence
ATGTCCACATCCACCGCCACAACGAGCGTCATCACGTCCAACGAGCTCTCGCTGTCCCACGGCCACTCGCACGGCCACAATCACGCCCATAATCTTCACCAGCATCAGCACAGTCGCCTGGGAGGCGTCGGTGTGGGAGTAGGTGTCGGCGTGGGTATCCTTAGCGACGCCTCACTGTCGCCCATCCAGCAGGGAAGCGGCGGCAACAACGGAGGAGGAGGAGGCGGAGGAGGAGGCAACAACAACAACAGCTCACCGCTGGCGCCCAACGGCGTGCCGCTCCTGACCACGATGCACCGATCGCCGGACTCGCCGCAGCCGGAGCTGGCCACCATGACGAACGTCAACGTGCTGGACCTGCACACGGACAGCTCCAAGCTGTACGACAAGGAGGCCGTCTTCATCTACGAGACGCCCAAGGTGGTGATGCCGCCGGAAGGCGGCGGAGGCAACAATTCCGACGAGGGCCATGCCATCGATGCCCGGATTGCCGCCCAAATGGGCAACCAGCAGGCCCAGCAGCAGCAGCAGCAACAGCAACAGCAGACGGAGCACCAGCCGCTGGCCAAGATTGAGTTCGATGAGAACCAGATCATCCGCGTCGTTGGCCCCAATGGCGAGCAGCAGCAGATCATTTCGCGGGAGATCATCAACGGAGAGCACCACATCCTCTCGCGGAATGAGGCTGGCGAGCACATCCTCACGCGGATCGTCAGCGATCCCTCGAAGCTGATGCCCAACGACAATGCGGTGGCCACCGCCATGTACAACCAGGCCCAGAAGATGAACAACGACCACGGTCAGGGCAATGTCTACCAGACCTCGCCGTTGCCTTTGGATGCCTCCGTGCTCCACTACAGCGGCGGCAACGACAGCAACGTGATCAAGACGGAGGCGGACATCTACGAGGACCACAAGAAGCATGCGGCTGCCGCGGCAGCAGCAGCAGCAGCCGCCGGCGGCGGGTCCATCATCTACACCACCTCCGATCCTAACGGAGTGACGGACAAGCACATCGATCTGATCTACAACGACGGCAGCAAAACGGTCATTTACTCCACCACGGACCAGAAGGGTCTCGAGATCTACTCGGGCGGCGACATTGGGAGCTTGGTCTCCGACGGCCAAGTGGTTGTCCAGGCTGGACTTCCCTATGCCACCGCCACTGGAGCCGGCGGGCAGCCTGTCTACATCGTGGCCGATGGCGCCCTGCCCGCCGGCGTAGAGGAGCATCTGCAGAGGAGAGGCTTTGGCTTGGATCCCCAGAGCGATCCCCATCACCAGGAGCAGCAAGAGCTGCTCCACCACCACTACTACCATCCCAGTGAGGCGGTGAAGGAGCAGGGTCTGGGTTTGATCCATCAGGATCACCAACAGGAGCAGGAACATCACCAGCACCATCACCTGCAGCATCATCTTCCTCTGACTGCCGCTGGCTTGATGCAGGCCGTTGCCGCTGAGATCCAGTTAGGCGAACAGCAGGAGCAACTGCCTCCTAATCCTTCGGAGAACAGCGCCTATCCCATCTATAGCTACTATCGGAGTGAGGGCGAAAAGGAGAGTCAAGAATCTTCGGCAGGTGACATAGCCTGGAGTGGCAAACTCAATGGCCAGACCACGCCCATCGATGTCTCTGGATTGTCACAGAACGAGATCCAGGGCTTTCTCCTCGGCTCGCATCCCTCGTCCTCGGCGACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGAGAGCCCGAGGACTTGCGCAAGGATCCCAAGAATGGCAACATTGCCGGTGCAGCGGCGGCCAATGGAGCGGGCTCGGTCATAACGCAAAAGATCTTGCACGCAAGTGAAGCTGATAGGCCCAGCACCAGCACCAGCGACGGCGAATCGGAAGCAGGATCTGGCTTAGGATCCCCCGGAAGCATCACACCTACAGCAGCACCTCTCCACTCCCCCAGCACAAAGATGTATGCGACCACGGGCGGCACACAGATCTACCTACAGACCTCACATCCCAGCGCGGCGAGCGGAGCGGGCGGTGGCGCCGGACCCACAGGAGCTGCCGGCGGCGGTGGCGGCGGCGGAGGCGTCTCCCTGCAGGCGCAGAGCCCCAGCCCGGGTCCCTACATCACAGCCAATGACTATGGAATGTATACGGCCAGCCGCCTGCCGCCAGGACCCCCGCCCACCAGCACCAGCACCTTCATTGCGGAGCCCTCCTACTACCGGGAGTACTTTGCGCCGGACGGCCAAGGCGGCTATGTGCCGGCCAGCACGCGATCCCTCTACGGGGATGTGGATGTGTCCGTGTCACAGCCCGGCGGAGTGGTTACCTATGAGGGCCGCTTTGCCGGCAGCGTTCCCCCGCCCGCCACCACCACAGTGCTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGAAAGAGCAATGGAGGAGCCACGCCCCTGTACGCCAAGGCCATCACGGCGGCGGGTCTCACGGTGGACCTGCCCAGTCCGGATTCGGGCATTGGAACGGATGCCATCACTCCGCGGGATCAGACCAACATCCAACAGTCCTTCGATTACACGGAGCTGTGTCAGCCCGGCACTCTGATCGATGCCAATGGCAGCATACCCGTGAGTGTAAACAGCATCCAGCAGCGGACAGTGGTCCATGGGAGTCAGAACAGTCCCACGACCTCGCTGGTGGATACGAGCACGAATGGATCGACGCGATCGCGGCCCTGGCATGACTTTGGGCGCCAGAATGATGCCGATAAAATTCAAATACCAAAAATCTTCACAAATGTGGGCTTCCGCTATCACCTGGAGAGCCCCATCAGCTCATCGCAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGAATAACGCTGGAGTATGTGCACGATGCGGACAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTCGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAAGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGGGATGCGGCGGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCTGAGCGCAAGACCCGCGACGAGGAGCGACGGGCGGCCAAGCGCAAGATGACGGCAACGGGCAGAAAGAAGCTGGACGAGCTGTACCATCCGGTGACGGATCGGTCCGAGTTCTATGGCATGCAGGACTTCGCCAAGCCACCGGTGCTATTCTCGCCCGCCGAGGACATGGAGAAGGTAGGTCAGCTGGGCATTGGCACTGGCACTACAACTGGCATGACATTCAACCCCATGAGCAACGGCAACTCCAACTCCAACTCGCACTCGTCCTTGCAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCATTCCTGCTCCATGGCCAGAAGGTGGCAACGCCGACGCTCAAGTTCCACAATCATTTTCCGCCCGACATGCAGACCGATAAGAAGGACCACATCCTGGACCAGAACATGCTGACCAGCACACCCCTGACCGACTTTGGTCCGCCCATGAAGCGCGGCCGGATGACGCCGCCCACCTCGGAGCGGGTGATGCTGTACGTCCGGCAGGAGAACGAGGAGGTGTACACTCCCCTGCACGTGGTTCCACCCACCACGATCGGCCTGCTGAATGCGATTGAAAACAAATACAAAATCTCAACAACGAGCATAAATAACATATATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGACATGATATCGTTCTACTGCAACGAGGACATCTTCCTGCTGGAGGTGCAACAGATCGAGGATGATCTGTACGATGTGACGCTGACGGAGCTGCCCAATCAGTAG
Protein Sequence
MSTSTATTSVITSNELSLSHGHSHGHNHAHNLHQHQHSRLGGVGVGVGVGVGILSDASLSPIQQGSGGNNGGGGGGGGGNNNNSSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMPPEGGGGNNSDEGHAIDARIAAQMGNQQAQQQQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHGQGNVYQTSPLPLDASVLHYSGGNDSNVIKTEADIYEDHKKHAAAAAAAAAAAGGGSIIYTTSDPNGVTDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATATGAGGQPVYIVADGALPAGVEEHLQRRGFGLDPQSDPHHQEQQELLHHHYYHPSEAVKEQGLGLIHQDHQQEQEHHQHHHLQHHLPLTAAGLMQAVAAEIQLGEQQEQLPPNPSENSAYPIYSYYRSEGEKESQESSAGDIAWSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPEDLRKDPKNGNIAGAAAANGAGSVITQKILHASEADRPSTSTSDGESEAGSGLGSPGSITPTAAPLHSPSTKMYATTGGTQIYLQTSHPSAASGAGGGAGPTGAAGGGGGGGGVSLQAQSPSPGPYITANDYGMYTASRLPPGPPPTSTSTFIAEPSYYREYFAPDGQGGYVPASTRSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPATTTVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGKSNGGATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQLGIGTGTTTGMTFNPMSNGNSNSNSHSSLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00479938;
90% Identity
iTF_00489848;
80% Identity
-