Basic Information

Gene Symbol
grh
Assembly
GCA_018152535.1
Location
NW:3045457-3093687[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.29 2.1e+03 -2.5 0.3 81 105 475 498 436 530 0.54
2 2 3.4e-63 2.5e-59 200.0 0.4 24 221 902 1094 888 1096 0.94

Sequence Information

Coding Sequence
ATGTCCACATCCACCGCCACAACGAGCGTCATCACGTCCAACGAGCTCTCGCTGTCCCACGGCCATTCGCACGGCCACAATCACGCCCATAATCttcaccagcatcagcagcacaGTCGCCTGGGCGTGGGTGttggtgtgggtgtgggtatCCTAAGTGACGCCTCTCTGTCGCCCATCCAGCAGGGCAGCGGAGGAAAtaacggaggaggaggaggcggcggaggaggcaacaacaacaacagctcaCCGCTGGCGCCCAACGGTGTGCCACTTCTGACCACAATGCACCGATCGCCGGATTCACCACAGCCGGAATTGGCCACCATGACGAATGTCAATGTGCTGGACCTGCACACGGACAACTCCAAGCTGTACGACAAGGAGGCTGTCTTTATCTACGAAACACCCAAGGTGGTGATGCCACCTGATGGCGGACCAGGTGGCGGAGGCGGCAGTAATCCCGACGAGGGTCATGCCATCGATGCCAGGATTGCTGCCCAAATGGGCAACCAACAggcccaacagcagcagcaacagcagacgGAGCACCAGCCGCTGGCCAAGATCGAGTTCGATGAGAACCAGATAATCCGAGTCGTGGGTCCCAATGGCGAGCAACAGCAGATCATCTCGCGGGAAATCATCAACGGGGAGCATCACATCCTGTCGCGGAATGAGGCCGGCGAGCACATCCTCACGCGAATCGTCAGCGATCCCTCCAAACTGATGCCCAACGACAATGCGGTGGCCACCGCCATGTACAATCAGGCCCAGAAGATGAACAATGACCATGGTCAGGGTAATGTCTATCAGACCTCTCCCCTGCCCCTGGACGCCTCCGTGCTGCATTACAGCGGTGGCAATGACAGCAACGTGATCAAGACGGAGGCGGACATTTATGAGGACCACAAAAAGCATGCGGCTgccgcggcagcagcagcagccgccgccggaGGTGGGCCCATCATCTACACCACCTCCGATCCCAATGGGGTGGTCAAGCAGCTGCCCCACCTGTCCGTGCCCCAGAAACTCGATCCGGATCTGTATCAGACTGACAAGCATATCGATCTGATCTACAACGACGGCAGCAAGACGGTTATATACTCCACCACGGATCAGAAGGGTCTGGAGATCTATTCGGGCGGCGACATAGGAAGCCTGGTGTCCGACGGTCAGGTCGTTGTCCAGGCTGGACTTCCTTATGCCACCGCCACGGGCGCCGGCGGACAGCCTGTCTACATAGTGGCCGATGGCGCTCTGCCCGCTGGGGTGGAGGAGCATTTGCAGAGCGGCAAGCTCAATGGCCAGACCACGCCCATCGATGTCTCTGGATTATCACAAAACGAGATTCAGGGCTTTCTCCTTGGCTCACATCCCTCGTCCTCGGCGACGGTCACCACCACCGGCGTGGTCTCCACCACGACGATCTCGCatcatcagcaacagcagcagcaacaacagcagcaacaccagcagcagcagcagcaacatcccGGCGACATTGTTAGTGCCGCTGGCGTTGGCAGCGCGGGCTCAATTGTTTCCAGTGCagttcagcagcagcaacagcaacagcagctaaTTAGCATCAAGCGAGAGCCCGAGGACTTGCGCAAGGATCCCAAGAATGGCAACATTGCCGGTGCAACGGCGGCCAATGGAGCGGGCTCGGTCATAACGCAAAAGATCTTGCACGCAAGTGAAGCTGTTAGGCCCAGCACAACAACATCGGAAGCAGGATCTGGCTTGGGAGCCCCCGGAAGCAACACACCATCACCACCTctagcagcagcaccaccacactccCCCAGCACCACAGCGATGTATGCGACCACGGGCGGCACACAGATCTACCTACAGACCTCACATCCCAGCGCGGCAAGCGGAGCAGGCGGTGGCGCCGGACCCGCTGGAGctgctggcggcggcggcggtggcggaggTGTCTCCCTGCAGGCTCAGAGCCCCAGTCCCGGTCCATACATAACGGCCAATGATTATGGAATGTATACGGCCAGCCGGCTACCGCCAGGACCCCCGcccaccagcaccagcaccttCATTGCGGAGCCCTCCTACTATCGGGAGTACTTTGCGCCGGACGGTCAGGGTGGCTATGTGCCGGCCAGCACGCGTTCCCTTTACGGTGATGTGGATGTGTCCGTGTCACAGCCCGGCGGAGTGGTTACCTATGAGGGCCGCTTTGCCGGCAGCGTTCCCCCGCCCGCCACAACCACAGTGCTGACCAGCAGTttgcaccaccagcagcagccacagcaccaccagcagcaccagcaacaacaacagcagcatcatACACATCCGCATCCACAGGATGCCAAGAGCAATGGAGGAGCCACGCCTCTGTATGCCAAGGCCATTACGGCGGCGGGTCTCACGGTGGACCTGCCCAGTCCGGATTCGGGCATAGGAACGGATGCCATCACACCGCGGGATCAGACAAACATACAACAGTCCTTCGATTACACGGAGCTGTGTCAGCCCGGCACCCTGATCGATGCCAATGGCAGCATACCCGTGAGTGTGAACAGCATCCAGCAGCGGACAGTGGTCCATGGGAGTCAGAATAGTCCCACGACCTCGCTGGTGGATACAAGCACAAATGGATCGACGCGATCAAGGCCCTGGCATGACTTTGGACGCCAAAATGATGCAGACAAAATTCAAATACCAAAAATCTTCACAAACGTGGGCTTCCGCTATCACCTGGAGAGCCCCATTAGCTCATCGCAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAATTCTATGGGATAACCCTGGAGTATGTGCACGATGCGGACAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGataCGAAGAACTCGGTTGGCCTCGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAGatcAACATTGCGGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCAGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCTGAGCGTAAAACACGCGACGAGGAGCGACGGGCTGCCAAGCGAAAGATGACGGCAACGGGCAGAAAGAAGCTAGACGAGCTTTACCATCCTGTGACGGATCGGTCCGAGTTCTATGGCATGCAGGACTTCGCCAAGCCACCGGTACTATTCTCGCCCGCCGAGGACATGGAGAAGGTAGGTCAGCTGGGAATTGGGACTGGCACTACAACTACTACTGCTACTACCAATACTGGCATGACATTCAACCCACTGAGCAACggcaactccaactccaactcgcACTCGTCCTTGCAGAGCTTCTACGGCCATGAGACTGACTCACCGGACCTGAAGGGGGCCTCGCCATTCCTGCTCCATGGCCAGAAGGTGGCAACGCCGACGCTCAAGTTCCATAATCATTTTCCGCCCGACATGCAGACCGATAAGAAGGATCACATTCTGGACCAGAACATGCTGACCAGCACTCCCCTGACCGACTTTGGTCCGCCCATGAAGCGTGGCCGGATGACGCCGCCCACCTCTGAACGGGTGATGCTGTACGTGCGGCAGGAGAACGAGGAGGTGTACACCCCACTGCATGTGGTACCACCCACCACCATTGGCCTGCTGAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatttatcGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGACATGATATCGTTCTACTGCAACGAGGACATCTTCCTGCTGGAGGTGCAACAGATCGAGGACGATCTGTACGATGTGACGCTAACGGAGCTGCCAAATCAGTAG
Protein Sequence
MSTSTATTSVITSNELSLSHGHSHGHNHAHNLHQHQQHSRLGVGVGVGVGILSDASLSPIQQGSGGNNGGGGGGGGGNNNNSSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDNSKLYDKEAVFIYETPKVVMPPDGGPGGGGGSNPDEGHAIDARIAAQMGNQQAQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHGQGNVYQTSPLPLDASVLHYSGGNDSNVIKTEADIYEDHKKHAAAAAAAAAAAGGGPIIYTTSDPNGVVKQLPHLSVPQKLDPDLYQTDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATATGAGGQPVYIVADGALPAGVEEHLQSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSATVTTTGVVSTTTISHHQQQQQQQQQQHQQQQQQHPGDIVSAAGVGSAGSIVSSAVQQQQQQQQLISIKREPEDLRKDPKNGNIAGATAANGAGSVITQKILHASEAVRPSTTTSEAGSGLGAPGSNTPSPPLAAAPPHSPSTTAMYATTGGTQIYLQTSHPSAASGAGGGAGPAGAAGGGGGGGGVSLQAQSPSPGPYITANDYGMYTASRLPPGPPPTSTSTFIAEPSYYREYFAPDGQGGYVPASTRSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPATTTVLTSSLHHQQQPQHHQQHQQQQQQHHTHPHPQDAKSNGGATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQLGIGTGTTTTTATTNTGMTFNPLSNGNSNSNSHSSLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00479938;
90% Identity
iTF_00594310;
80% Identity
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