Basic Information

Gene Symbol
grh
Assembly
GCA_035047585.1
Location
JAWNPJ010000001.1:679330-710241[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.14 1.3e+03 -1.5 0.2 76 108 600 632 566 661 0.65
2 3 2 1.9e+04 -8.2 4.1 93 106 921 934 913 941 0.37
3 3 4.6e-63 4.4e-59 199.5 0.4 24 221 1063 1255 1049 1257 0.93

Sequence Information

Coding Sequence
ATGTCCACATCCGCCGCCACAACGAGCGTCATAACGTCCAACGAGCTCTCGCTGTCCGCCCACGCCCACGGCCACGCTCACGGTcacggccacgcccaccagcTGCATCAGCATCCCCACAGCCGGCTTGGTGTCGGCGTAGGTGTTGGCATCCTTAGCGACGCCTCACTCTCACCCATCCAACAGGGAAGCGGAGGAGGCGGTGGGAATAACAACAATACCTCACCACTGGCGCCCAACGGAGTACCACTCTTAACGACGATGCACCGCTCCCCGGACTCACCCCAACCAGAGCTGGCCACCATGACGAATGTGAATGTCCTGGACCTGCACACGGACAACTCCAAGCTCTACGACAAGGAGGCGGTCTTCATCTATGAAACACCCAAGGTGGTAATGCCATCAGACGGGGGCGGTGGAGCGGGAGGCGGTGGTGCTGGCGGGCCGGCGGACGAGGGTCATGCCATCGATGCCAGGATTGCGGCCCAACTGGGCCAAAATCCaaatcagcaacagcaacagcaggccGAGCACCAGCCGCTGGCCAAGATCGAGTTCGACGAGAACCAGATCATCCGCGTGGTGGGGCCCAACggcgagcagcagcagatcATCTCGCGGGAGATCATCAACGGCGAGCACCACATCCTGTCCCGCAACGAGGCTGGCGAGCACATCCTGACCCGCATCGTGAGCGATCCCTCCAAGCTGATGCCCAACGACAATGCGGTGGCCACGGCCATGTACAACCAGGCCCAGAAGATGAACAACGATCACGGCCAGGCCGTCTACCAAACGTCCCCCTTGCCACTGGACGCCTCTGTGCTGCACTACAGCGGCGGCAACGACTCCAATGTGATCAAGACCGAGGCCGACATCTATGAGGATCATAAAAAGGCTGCTGCGGCAGCCGCTGCCGCTGGCGGAGGATCCATTATTTACACCACCACCGATCCTAACGGCGTCAATGTGAATGTGAAGCAACTGCCCCACCTGGCGGTGCCGCAGAAACTTGACCCCGACCTCTACCAGGCGGACAAGCACATCGATCTGATCTACAACGATGGCAGCAAAACGGTCATATACTCCACCACCGATCAGAAGAGCCTGGAGATCTACTCGGGCGGCGACATTGGCAGCCTGGTGTCCGACGGTCAAGTGGTGGTTCAGGCCGGACTACCCTATGCCACAGCCACGGGAACCGGGGGACAGCCGGTGTACATTGTGGCCGACGGTGCCCTGCCCGCGGGGGTCGAAGAGCATTTGCAGAGGCGAGGCTTCAGCTTGGACTCACTGCATTCGGCGAGCATCGAAACGGATCCCCATCATCACCATCATCAGCTtgatcagcagcagcatctgCAGCAGCACCATCTCCTCCAGAGCTACTATAACCAGACTGAGCAGGTGAAGGAGCCGGGCTTGAGTTCTCTGGACTCCCTGAGCCATCACCAGGAGAACCACCATACCCACCATCTCACTGCTGCTGGCCTGATGCAAGCCGTGGCAGCGGAAATCCAGCTTAGCGAGCAGCAAGAGGCACTGCCCCCACCTCCCACCAATCATTCCGCTCCCTCGGAAAATAGTCCTTATCCCATTTATTCTAGTTTCTATCGGAACGATGCCGAAAAGGAGAATCATGTCTCAGATCCAGAGCTGACCTGGAGCAACAATTCCAACAATAGTGGAAAACTGAATGGCCAGACCACACCTATCGATGTCTCGGGCCTATcgcaaaatgaaatccaagGCTTTCTGCTCggctcccacccctcgtcgtCGGCGACGGTCACCACCACGGGCGTTGTCTCCACCACGACGATCTCGCatcaccagcaacagcaacaacagcagcagcagcaacagcagcaacaccagcagcaacagcatcccGGTGATATTGTCAGCGACGCGGGCGTGGGGAGTGCAGGATCAATTGTCTCCAGTGCggtgcagcaacagcaacaactaaTTAGCATCAAACGAGAACCCGAAGACTTGCGAAAGGATCCGAAAAATGGCAACATTACCGGTGCAACGGCAGCGAACGGAGCGGGTTCGGTCATAACGCAAAAGATCTTGCACGTGGATgcaccagcaccaccgccGTCCGCAAGTGAAGCTGTTAGGCCCAGCACATCGCACACCACTaggagaagcagcagcagcagcaccacctcCGACGCCAGCACCACCCCCACTGAATCGGAACCGGAAGCAGCCACCGCACTCGAGATGTACGCAACCACGGGCGGCACACAGATCTACCTACAGGTGAGACCCATCATCGACTACGAGACCGATGTTGTTGAGCGCTGTGTGACCCACCAAACCCACCACCTGCAGACCTCACATCCCAGCACGGCGAGCGGAGCTGGCGGCGGGGCCGGGCCAGCGGGCGCGGCCGGCGGCGGGGGCGTCTCCCTTCAGGCGCAGAGCCCCAGCCCCGGTCcgtatatctccgccaatgaTTATGGAATGTATACGGCCAGTCGCCTGCCACCCGGTCCCCCgcccaccagcaccaccacgtTCATTGCGGAGCCCTCGTACTACCGGGAATACTTTGCCTCGGATGGACCCGGAGGCTATGTGCCGGCCAGCACGCGATCCCTGTACGGCGACGTGGATGTTTCCGTCTCGCAGCCCGGCGGAGTGGTTACCTACGAGGGCCGCTTCGCCGGCAGCGTTCCCCCGCCCGCCACCACCACTGTGctgaccagcagcagcagcctctCCAGcatgcaccaccaccagcagcagcagcagcagcagcaacaacagcaacaccaccagcagcaacagcaacagcaccaccCGCAGGACGGCAAAGGCGGTGGTGGCGCCACGCCCCTCTACGCCAAAGCGATTACGGCAGCCGGTCTGACAGTGGATCTTCCAAGTCCGGACTCGGGCATTGGAACAGATGCCATAACTCCGCGGGATCAGACCAACATCCAACAGtCCTTCGATTATACGGAACTGTGCCAGCCGGGCACCCTGATCGATGCCAATGGCAGCATACCCGTCAGTGTGAACAGCATCCAGCAGAGGACGGTGGTGCACGGGAGCCAGAACAGCCCTACCACCTCCCTGGTGGACACGAGCACGAATGGATCCACACGCTCCCGGCCCTGGCACGACTTTGGCCGCCAGAACGATGCTGACAAAATACAAATACCAAAAATTTTCACAAATGTGGGCTTCCGCTATCACCTGGAAAGCCCCATCAGTTCATCGCAGAGGCGGGAGGACGATCGCATCACCTACATAAACAAGGGCCAGTTCTACGGAATAACTCTGGAGTATGTTCACGATGCGGATAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGCCCCGAGGACGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTACAGTGCCTCAGCACGGACTTCAGCAGTCAAAAAGGAGTCAAGGGCCTGCCGTTGCACGTACAAATCGACACATTCGAGGACCCCAGGGATACGGCGGTCTTCCACCGCGGCTACTGCCAGATAAAGGTCTTCTGCGATAAGgGTGCTGAGCGAAAAACACGAGATGAGGAGCGACGGGCTGCCAAACGAAAGATGACTGCCACTGGGCGTAAGAAGCTGGACGAACTATATCATCCTGTGACGGATCGGTCCGAGTTCTACGGCATGCAGGACTTCGCCAAGCCGCCGGTGCTGTTCTCGCCAGCCGAGGACATGGAGAAGAGCTTCTACGGGCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCTTTCCTGCTCCACGGCCAGAAGGTGGCTACGCCGACGCTTAAGTTTCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCATATACTGGACCAGAACATGCTATCCAGCACACCCCTGACCGACTTTGGTCCGCCGATGAAGCGTGGCAGGATGACGCCGCCCACCTCCGAGCGCGTGATGCTGTATGTGCGGCAGGAGAACGAGGAGGTCTACACGCCCCTGCACGTGGTGCCGCCCACCACCATCGGCCTCTTGAATGCGAttgaaaacaaatacaaaatctCAACAACGAGCATAAATAACATATATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGACGATATGATATCGTTCTACTGCAATGAGGACATCTTTCTGCTGGAGGTGCAACAGATCGAGGACGACCTGTACGATGTGACGCTCACGGAGCTGCCCAACCAGTAG
Protein Sequence
MSTSAATTSVITSNELSLSAHAHGHAHGHGHAHQLHQHPHSRLGVGVGVGILSDASLSPIQQGSGGGGGNNNNTSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDNSKLYDKEAVFIYETPKVVMPSDGGGGAGGGGAGGPADEGHAIDARIAAQLGQNPNQQQQQQAEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHGQAVYQTSPLPLDASVLHYSGGNDSNVIKTEADIYEDHKKAAAAAAAAGGGSIIYTTTDPNGVNVNVKQLPHLAVPQKLDPDLYQADKHIDLIYNDGSKTVIYSTTDQKSLEIYSGGDIGSLVSDGQVVVQAGLPYATATGTGGQPVYIVADGALPAGVEEHLQRRGFSLDSLHSASIETDPHHHHHQLDQQQHLQQHHLLQSYYNQTEQVKEPGLSSLDSLSHHQENHHTHHLTAAGLMQAVAAEIQLSEQQEALPPPPTNHSAPSENSPYPIYSSFYRNDAEKENHVSDPELTWSNNSNNSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSATVTTTGVVSTTTISHHQQQQQQQQQQQQQHQQQQHPGDIVSDAGVGSAGSIVSSAVQQQQQLISIKREPEDLRKDPKNGNITGATAANGAGSVITQKILHVDAPAPPPSASEAVRPSTSHTTRRSSSSSTTSDASTTPTESEPEAATALEMYATTGGTQIYLQVRPIIDYETDVVERCVTHQTHHLQTSHPSTASGAGGGAGPAGAAGGGGVSLQAQSPSPGPYISANDYGMYTASRLPPGPPPTSTTTFIAEPSYYREYFASDGPGGYVPASTRSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPATTTVLTSSSSLSSMHHHQQQQQQQQQQQHHQQQQQQHHPQDGKGGGGATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLSSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00479938;
90% Identity
-
80% Identity
-