Basic Information

Insect: Diatraea saccharalis
Gene Symbol: -
Assembly: GCA_014843785.1
Location: JACGTY010001914.1:24553-33025[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.027 2.4 9.5 4.1 1 23 75 98 75 98 0.97

2 19 3.3 2.9e+02 2.9 4.6 1 23 181 203 181 203 0.97

3 19 0.0013 0.11 13.7 0.7 2 23 209 230 208 230 0.97

4 19 6.7 6e+02 2.0 2.3 1 23 236 258 236 259 0.93

5 19 0.21 18 6.7 3.4 2 22 500 520 499 520 0.95

6 19 3.5 3.1e+02 2.9 1.0 1 23 618 640 618 640 0.82

7 19 0.26 23 6.4 0.5 2 23 775 796 774 796 0.96

8 19 0.077 6.9 8.0 1.2 2 23 873 894 872 894 0.96

9 19 0.036 3.2 9.1 1.7 1 23 902 924 902 924 0.97

10 19 0.12 11 7.4 3.4 1 23 958 980 958 980 0.95

11 19 0.00024 0.022 15.9 4.0 1 23 988 1010 988 1010 0.99

12 19 0.46 41 5.6 2.0 1 23 1089 1111 1089 1111 0.98

13 19 0.8 71 4.9 0.8 1 19 1167 1185 1167 1189 0.93

14 19 0.0083 0.74 11.1 0.3 1 23 1285 1307 1285 1307 0.94

15 19 0.004 0.36 12.1 2.1 1 23 1313 1335 1313 1335 0.96

16 19 0.0068 0.6 11.4 2.6 1 23 1425 1447 1425 1447 0.97

17 19 0.00017 0.015 16.4 1.4 1 23 1453 1475 1453 1475 0.99

18 19 2.1 1.9e+02 3.5 1.4 1 23 1564 1586 1564 1586 0.94

19 19 0.00066 0.058 14.6 1.8 2 23 1598 1619 1597 1619 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.027	2.4	9.5	4.1	1	23	75	98	75	98	0.97
2	19	3.3	2.9e+02	2.9	4.6	1	23	181	203	181	203	0.97
3	19	0.0013	0.11	13.7	0.7	2	23	209	230	208	230	0.97
4	19	6.7	6e+02	2.0	2.3	1	23	236	258	236	259	0.93
5	19	0.21	18	6.7	3.4	2	22	500	520	499	520	0.95
6	19	3.5	3.1e+02	2.9	1.0	1	23	618	640	618	640	0.82
7	19	0.26	23	6.4	0.5	2	23	775	796	774	796	0.96
8	19	0.077	6.9	8.0	1.2	2	23	873	894	872	894	0.96
9	19	0.036	3.2	9.1	1.7	1	23	902	924	902	924	0.97
10	19	0.12	11	7.4	3.4	1	23	958	980	958	980	0.95
11	19	0.00024	0.022	15.9	4.0	1	23	988	1010	988	1010	0.99
12	19	0.46	41	5.6	2.0	1	23	1089	1111	1089	1111	0.98
13	19	0.8	71	4.9	0.8	1	19	1167	1185	1167	1189	0.93
14	19	0.0083	0.74	11.1	0.3	1	23	1285	1307	1285	1307	0.94
15	19	0.004	0.36	12.1	2.1	1	23	1313	1335	1313	1335	0.96
16	19	0.0068	0.6	11.4	2.6	1	23	1425	1447	1425	1447	0.97
17	19	0.00017	0.015	16.4	1.4	1	23	1453	1475	1453	1475	0.99
18	19	2.1	1.9e+02	3.5	1.4	1	23	1564	1586	1564	1586	0.94
19	19	0.00066	0.058	14.6	1.8	2	23	1598	1619	1597	1619	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTTCTCACCGAACTACATGCGCCCCTTCGAAGGACGATTGTGTGGTGATACTTCATCTGAGGCTTCCTCGGACGCTGCGGAGGAGTCTGACTTACCGCAGTGCAAGATAAGGCGGAACTACAGCTGTGTCAAGTGTAAATTTTTCACGCAGAACCCCCGCGTTTATTTAGTGCACGTTCGTGACGTTCATTTTGAAAAGTTTAGAATATATGACTGTCCACACTGTGTTTATGCCTCGAGGCATCACCAAAAACTTATAAGACATATCAAAATGGTTCATGGCACGTCGACTTCTGCGATGACCTCTAAAATGGATACGGAACTACCCGCAACCGTTCCGAACACTTTGGAACCGTTAGAGCGAATCGAAGATTTGCTCGAGGAAGTCGAAGAATGTGACGACATTGAATTAGATTTAGATGAATGCAACGAAGAGTCATTCGAGCGATCCGCAGAAGCGAATATTGAGAGCGACAAGATCAGTGACGCCGCTCTAGAAGCAGCATTAAAGAATAAGGGCAAATATTTTTCTTGTAACAAGTGCAACTACGTGACCCATATAAAGGCTAGATTTACGAAACATGTGAAATATCACTCGATGCCGATGATTAAATGCACTATATGTGATTTTCGCTCGCCGTATAAATGGAATCTAGATCGCCACATGAAGAACCACGGCGGCAATGGAAACTTCAAGTGCTTCATGTGCAACTTCACCGCGGATATCAAGCAGAGTCTGACGTTGCACGAGTTGAATCATCACACGCCGCCCGTGGGCCAATCGGCGGCGAGTCGCCGTCGCAATCGGGTGGGCGCCAGTGACATGGCGGACGCTCTCATCCTGAAGGAGGAAGGGAGCGGCGATTCACGATCCTCTTTCTCGGCTTCGGACATGCAAAATGCCGAAAAAGATATTGTCAGCTGCCACAGCGACTCAAACGACGCCGACGTCACACCGGACACAGCTGCCAGAAGAAATACAGTTCAAGAAGAGCTGGAACAAGACGCACATAATCAGTTGTCCCCCAACACCACTGCAGATGACACCAGATCTCAAAAACAAAACCGAAAAACTCCCAGACCACCACCACCACTCATACCATTGCATGCTTCAACACCTCAAAACAAAACGCCTAACGGAGAACCACCAGCAAAGAAATTTAAAGAAACTCCCACGACAGAATCGACAGACTTAAACAAAGCAAGTAAATTCGAGAACTTACCAGTCGACATTAGTCTTATACCCGTAAATAATATTCCCACGAGTAGTAAAGAAGCACCTGGTCGTAAGAAAAACAATTCATTTTTCGATAAACTCAAAGAGAGGTTGTTAACAGAGACAGGGGAAGATGGATCTCTGATTTGTAAAAACTGCGGTTTCGAAAGTAAATGTCTGTCAGAACATTCGGTACACGAGAAAAACTGTGCAGCTCAATTAAACCGAACGTCAACTAACACATTGCTTCCGAGTATGAGCTCAACTCGTTGTCAAAATTGCAGACATAGGTGTAAATCTAGTGCAGACTTATACATTCACATGCAAACATGCAGGAAGAGCGAGAAAAATGGAGATGTTGCTTCGGAAATAAAAAGTCAAGACAGTAATGAGGGTGAGATTTCCACGCAAGAAAAAGAGAGTGAACCACATCCTATGGAAAATGTCGTTTTTGTTTGGAACAATATCAGTCATAATGCAAATAAGTATGATACTCCTCTTGACATTAATATTAACGACGATTCCACTCTCCCGGAAATGACTAGAACGTACGACACGGAAACTGCAGATGACAACGAGAGCATGAATTTGTCGCCTAGTCAAGCAATGGGAAAGAAAGTTTTCAAATGTCCACATTGTCCATTTTGGGCTTCTACGGCGTCGAGATTTCACGTACATATTGTGGGTCATTTAAACAAAAAGCCATTCGAATGTTCCCTCTGCAAGTATAAGTCTAACTGGCGGTGGGACATTACGAAACATATTAAGTTAAAGTCGGCCCGAGATCCAGAACATAACGAAGCGAAAGTGCTCATGACTGATGAAACTGGCCGAAGAAATTACAGTAAATATAATAAATTCTTAGCAATGTCTATGTTGAACGAGAACGGGGAAAATACTTTCCACTATATAGACTTAAACACATCAGCCGATGCGTCGATGGAAATTGAAGAATCTTTAAGTGAACCAACAGATAATATCAGCCAGGGAATGGAGATGCAACCACTTAATTTACAAACTTATGGCAATGACCAAAAGTACGATATGATGGGCACCAACTTTGATTTGAAGAAGCCCAAGAAAACATTATGGAAGTGCAAGAAATGCAATTATAGAGATTCATCCAAAGAGGCTTTATTAGAACATGTACGTGATCACGCCCGCGCAGAAGGGAGCCAAGACGAAATTAAAATAGGAAAAAAGCCGGAAAACCTTCCGGATCCAGCTGACTTGGCGTATCGTTGTGGTCATTGCAATCAACTGTCAAACTGGAAACATGTAATACAGAGACATTGTCGCTTAAAACATGAAGGAATTATCAAAGTTATAACTACAGTCAAGCCAAAACCAGACACGACTATACAATTGAACGAAATCTCCGGCGACACCTGTAACAAATGCCCTTTCAAGACTACTGATAAAAAGTTAATGTTCGCACATGTCCAGCAGCATCAACCGTCACCATTATCAATATTCAAATGTTTCTTCTGTCCCTACTTTGTTAAGGACGAACACGAATTGATACAACATTTACTTTTACACGGAATTTCTGAACCAGAAGAGTACATTGCGAAAGCAATGGGCCATAAAACACCACCTTCGGAGTTAGGAGGCAACTGTACTGGTACTTCCACAAAACGACACAAATGCACAGAATGCCCTTACGAAACCAACAGCAAGTCACAATACATGTACCATGAACAATTTCATCGACTTCCTGCAGATACCCCATACAAGTGTCCAGAGTGCAATTATAGCGTTTCTAAAAGACATCTTCTCCATCAACACTTAAGAGTGCACGGTATTCTGCCAAAGAAAATTGAATCAGAAGCTGAATTAGAAGCAAAATCAGATATTAAAATAGAATATTCGATGAATCTTGATGAAATTCCGTTTGTCTGGGTATCAGCTAAAAATGAATTCCATAAAATGTACAAATGTCGCTATTGTTCTTATGTGAACTCACAAAAGTGTAAAATACCGAACCATGAAAAAATTCATTGTATTGTTTTTGAGAATAGTGATATTACAGTTTATAAGTGCTTAGAATGCAAATTTACCTGTGATAGCGCTATAAGATTAGCCGAGCATTCCAAAACCCACGGTGAAATATATGGTCGTATTTACTGCCCCGTGGAACCTGACATACCAGACGAAGAACAGATAGCCAAATTGCGCAAAGTTATAGAATCAGAAAAATCTGTTTCTTCGGATTGTATACTTAAAGAAGATAAATTAGTAAACGAAAATAATGAAGTCAAAATTTTATACTTTTGTCAAATGTGTCCCGCTAGATTTTTCAATGATGAAGAACTCAAAATTCACGATAAGTTTCATGATTCATCATTTCCAAACAAATGTAAACGGTGTGAATTTTCTGTTCTGGAAGAAAACGATTTAGCTGCTCATGTTACTGTTCACAGCGATGAATATCACACTAAAACAAAGATGCTAAAATTCATACATAATTCTCATAGTGCTCATAGGCAACCTAACTTGGAACTTTTGCATTGTCCCACTACTTCCGAGATAACATGGGTGGTCTTGTGTCCTAATAAAAATTATGAATGTGAATCTTCTAGTAATAAGCGACCTCATGACACAAAACATACACCAAAACAATATAATTGTAAAGAGTGTCCAGCCAAATTCTTTAAAAGTTCTGCGCTTATTTATCATTTGGGCTTGCACGGTGGACATGGTGAACACAAATGCAAAAAATGTAGTTATACTGTTAAAAACTTGGGTAATCTGGCCAAACATGAATTGTTACACGAGAACGAAGTAAAAACCACAACTTGCGATTACGAATCGGGAGAAGACATGGATTACAAAAATATTCCACTTTCCGGAACTGACCTATTTCAAAGAAAGACTGAAGCTCAAAAACGAGTACTTAACGATAAAGATAAGTTAGTAAAGCCAAATGATCATTTTCCGCCAGTATTGCAAGCTGATCCCCAATTTGGGTATTTGATGCATGGAAATCCCGAATTCATTTATCCAACTTACTTAAAAAACGGTCGCCAGAAAGAAAAAAGATACAAATGCCACAAATGTCCGTCGGCTTTTGAAAAGAGGGAGCAGTATAAAATACATCTATCACTACATGGTTCCAAGCAAAGATATAAATGTGAACTTTGCGATTACTCTGTCAAGTATTATGCCAATTATGTTCAACATATGAGAAAGCATCAAATGAACGATGAAGCACAAGCTGAAAGAAAAAAAATCAGTAACGGGTATATCGAATCTGAAACAAATGAAGGTAAAGACGAAGATAGTGACAACATTAAATTAGCAATTAAAACAATGCCTAAGGCAGTGCCAAAAAGCGATTTCCAGCAGTTTTCAATACGCGACCAACAAACACTCCGACTTTTGCAGCGAAGACGTTCCATAAATGGCAAGGATCAAATTTCTCCAACTGAAACATCACCCACGAAAGATAGAAAATTACACATATGTTTATTGTGCCCGTATACTAATCAACGATTAGACGCTTTGAATAATCACTATAAAAGACACGATGATGTTAATATTGAGTATGCAGGACATCAGAAGTGTTCCTATTGTGACTTGGTCGTTGTACAGTCGCATTTCCTAAGGGAGCATATGAAAACTCATTTTCATTATCAAAAGAATTTGACGCCAGAATGTTATGTGGCTAACAATGACGTCAGTTTCACTATAACTAAAGTAGACGACGAAGATTCGTCTACGGATCTCAAATTAGATTTGCAATGTGCAAATATTAAATGCAATGAAGAAAAGCTATTTGTAAAGATACAAACAGGAGAACTCATGGTAGAATAA
Protein Sequence: MLQQMFSPNYMRPFEGRLCGDTSSEASSDAAEESDLPQCKIRRNYSCVKCKFFTQNPRVYLVHVRDVHFEKFRIYDCPHCVYASRHHQKLIRHIKMVHGTSTSAMTSKMDTELPATVPNTLEPLERIEDLLEEVEECDDIELDLDECNEESFERSAEANIESDKISDAALEAALKNKGKYFSCNKCNYVTHIKARFTKHVKYHSMPMIKCTICDFRSPYKWNLDRHMKNHGGNGNFKCFMCNFTADIKQSLTLHELNHHTPPVGQSAASRRRNRVGASDMADALILKEEGSGDSRSSFSASDMQNAEKDIVSCHSDSNDADVTPDTAARRNTVQEELEQDAHNQLSPNTTADDTRSQKQNRKTPRPPPPLIPLHASTPQNKTPNGEPPAKKFKETPTTESTDLNKASKFENLPVDISLIPVNNIPTSSKEAPGRKKNNSFFDKLKERLLTETGEDGSLICKNCGFESKCLSEHSVHEKNCAAQLNRTSTNTLLPSMSSTRCQNCRHRCKSSADLYIHMQTCRKSEKNGDVASEIKSQDSNEGEISTQEKESEPHPMENVVFVWNNISHNANKYDTPLDININDDSTLPEMTRTYDTETADDNESMNLSPSQAMGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMSMLNENGENTFHYIDLNTSADASMEIEESLSEPTDNISQGMEMQPLNLQTYGNDQKYDMMGTNFDLKKPKKTLWKCKKCNYRDSSKEALLEHVRDHARAEGSQDEIKIGKKPENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTVKPKPDTTIQLNEISGDTCNKCPFKTTDKKLMFAHVQQHQPSPLSIFKCFFCPYFVKDEHELIQHLLLHGISEPEEYIAKAMGHKTPPSELGGNCTGTSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGILPKKIESEAELEAKSDIKIEYSMNLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSDITVYKCLECKFTCDSAIRLAEHSKTHGEIYGRIYCPVEPDIPDEEQIAKLRKVIESEKSVSSDCILKEDKLVNENNEVKILYFCQMCPARFFNDEELKIHDKFHDSSFPNKCKRCEFSVLEENDLAAHVTVHSDEYHTKTKMLKFIHNSHSAHRQPNLELLHCPTTSEITWVVLCPNKNYECESSSNKRPHDTKHTPKQYNCKECPAKFFKSSALIYHLGLHGGHGEHKCKKCSYTVKNLGNLAKHELLHENEVKTTTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKISNGYIESETNEGKDEDSDNIKLAIKTMPKAVPKSDFQQFSIRDQQTLRLLQRRRSINGKDQISPTETSPTKDRKLHICLLCPYTNQRLDALNNHYKRHDDVNIEYAGHQKCSYCDLVVVQSHFLREHMKTHFHYQKNLTPECYVANNDVSFTITKVDDEDSSTDLKLDLQCANIKCNEEKLFVKIQTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01335492; iTF_00683783; iTF_00682956; iTF_00383208; iTF_00285019; iTF_00036243; iTF_00035260;
90% Identity: -
80% Identity: -