Etru004928.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudonia truncicolella
Gene Symbol
-
Assembly
GCA_949315975.1
Location
OX438828.1:14843546-14848549[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.14 12 7.2 3.4 2 22 195 215 194 215 0.95
2 16 2.7 2.4e+02 3.1 1.0 1 23 314 336 314 336 0.82
3 16 0.15 13 7.1 0.5 2 23 472 493 471 493 0.96
4 16 0.049 4.2 8.6 0.5 2 23 570 591 569 591 0.96
5 16 0.082 7.1 7.9 1.5 1 23 599 621 599 621 0.97
6 16 0.097 8.4 7.7 3.4 1 23 656 678 656 678 0.95
7 16 0.00019 0.017 16.2 4.0 1 23 686 708 686 708 0.99
8 16 0.69 60 5.0 3.0 1 23 787 809 787 809 0.97
9 16 0.37 32 5.9 0.6 1 19 865 883 865 887 0.93
10 16 1.1 94 4.4 0.3 2 23 894 915 893 915 0.96
11 16 0.007 0.61 11.3 0.7 1 23 982 1004 982 1004 0.94
12 16 0.01 0.91 10.8 1.1 1 23 1010 1032 1010 1032 0.96
13 16 0.0053 0.46 11.7 2.6 1 23 1122 1144 1122 1144 0.97
14 16 0.00013 0.012 16.7 1.4 1 23 1150 1172 1150 1172 0.99
15 16 1.4 1.2e+02 4.1 1.6 1 23 1261 1283 1261 1283 0.96
16 16 0.00064 0.056 14.6 3.9 1 23 1294 1316 1294 1316 0.98

Sequence Information

Coding Sequence
ATGCAAAATCCTGAAAGAGACATCGTTAGCTGTCACAGCGACTCAAACGACGGTGCTTCCGACACAGCTTCCAGAAAGGACGGGATGCAGTTGGGACGAGACTGCCCGAACCAGATGTCGCCGAACGCCTCCGCAGATGACGCCAAATCacagaaacaaaacagaaaGACTCCCAGGCCACTACCACCGCTCATACCGCTGCACGCGTCAACACCGAATCAGAATAAAACCACCGGAGAACCCCCCGCCAAAAAATTCAAAGAAACCCCTAACTCAGAGCTAACTGAAACAAACAAAGTACTAAACAAATTGGAAAACTTACCAGTCGACATTAGTCTCATACCTGTTAACAATATTACCTCAAACAACAAAGAAACCGTGGTCCGTAAGAAAATCAATTCATTCTTTGATAAACTTAAAGAAAGGTTGTTAACCGAGACCGGTGAAGAAGGTTCGCTAATATGCAAAAGTTGCGGTTTCGAAAGCAAATGCCTTTCAGAACATTCAGTACACGAGAAAAACTGTACTTCACAAATGAATCGATCGGCAACGAATACCTTGCTTCCAAGCATGAGCTCAACACGCTGCCAAAACTGCCGACATAGATGTAAATCTAGTGCAGACCTTTATGTGCACATGCAAACGTGCAGAAAGAACGAGAGAAGTGGAGACGATGCCGCCACTGAGGTAAAAAGTCAAGACAGCAACGAAGGCGCCGGATCAGGACAGGACAGAGACATTGAACCGCATCCTATggaaaatgttgtttttgtttggAACAATATTGGTCATAACGCTAACAAGTATGAAACTCCACTTGACATAAATATTAACGATGATTCAACTCTTCCGGAAAATAATAGGAACTACGACCCTGAAACAGCGGACGATAATGAAAGTATGAACTTATCACCTAGTCAGGCAATGGGCAAGAAAGTGTTCAAATGTCCGCATTGTCCATTCTGGGCCTCGACCGCGTCAAGATTCCACGTACATATTGTAGGGCATTTGAATAAAAAGCCGTTCGAGTGTTCTCTGTGCAAGTACAAGTCCAACTGGCGTTGGGATATCACCAAACATATCAAGCTGAAGTCGGCCAGAGACCCAGAGCATAACGAAGCGAAAGTACTTATGACAGACGAGACTGGACGAAGAAATTAcagtaaatacaataaattcgtGGCCATATCTGTGTTGAACGACAATGGTGAAACTGTATTTCATTATATAGATATCAATGCTTCGGCGGACCCGTcgattgataatgatgaatcaTTTAATGATATGACGGATAGTATGGGTCACCCAATGGAGATACAACCCCTCAACTTACAAATGTATGGCAGTGAGCAAAGTTATGATACGATGGATAACAGAAATATGGATATGAAGAAACCCAAGAAAACTTTATGGAAAtgtaaaaagtgtaactacaGAGATTCGTCCAAGGAGGCTCTACTGGAGCACGTGCGCGAGCACTCGAGAGTAGAGGGCCACCACGAGGAGGTGAAAGTTACCAAAAAGCCGGATAACCTCCCGGACCCAGCTGACTTGGCCTATCGATGCGGCCACTGCAACCAACTGTCCAACTGGAAACATGTTATACAGAGACATTGTCGCTTGAAACATGACGGTGtcataaaagttataacaaCGGTGAAGATAAAACCAGATAACTCTGCGTTGCTGAACGAAATCACTGGGGACACGTGCAACAAGTGCCCTTTCAAAAGCAGCGACAAGAAGCTCATGATAGCACATCTGCTGCAGCATCAGCCCTCGCCGCAGTCTATCTTCAAATGCTTCTTCTGCCCCTTCTTCGTTAAGGATGAACACGAGTTGATACAACATCTCATTTTGCACGGAGTTACTGAGCCAGAAGAGTACATAGCTAAAGCTATGGGTCGCAAATCTCCGCCACCCGAATTGGGATTGACTATTCCGAACACGTCCTCAACGAAACGGCACAAATGCACGGAATGTCCATACGAAACAAACAGCAAGTCCCAATATATGTATCATGAACAGTTCCATAGGCTTCCAGCGGATACGCCTTACAAATGCCCGGAGTGTAATTATAGCGTCTCCAAAAGGCATCTGCTTCATCAACACTTAAGGGTTCACGGCATACTGCCCAAGAAGTTTGAAACGGAAGCCGAATTAGAAGCAAAGACAGATCTTAAAATTGAATATTCGTTAAATCTCGATGAGATCCCATTTGTGTGGGTTTCGGCCAAAAATGAGTTCCATAAGATGTACAAGTGTCGTTATTGCTCATATGTGAACTCGCAAAAATGTAAAATTCCGAACCATGAAAAGATTCACTGTATAGTTTTTGAGAACAGTGATGTTACTGTTTACAAGTGCTTGGAATGCAAATTTACTTGTGATAATGCTTTTAGATTAGCCGAGCATTCTAAATCTCATGGCGAAATATATGGCCGTATTTATTGTCCAGTGGAAATCGATGTTCCTGATGAAGAACAAATAGCTAAGCTGAGAAAAGTTATTGAAGCCGAAAAAGCAAACACACTAGAAAGTCTACTAAAAGAGGACAGACTAGTGCACGAGAAtaatgaaatcaaaattttatattattgtcaaATGTGTCCAGCTAGATTTTTCACCGGTGAAGAACTTAAAATTCATGATAAATTCCATGATCTTTCTTTcccaaataaatgtaataaatgtgAATTTTCCGTTCCTGAAGAATGCGATCTCATTTCACATGTTGCTGTCCACACAGACGAATAccatactaaaacaaaaatgctTAAGTTCATACATAACTCGCATGGAGGACACAAACAACCCAATCTCGAGCTCGTCCATTGCCCCATTACGTCAGATATCACGTGGGTTGTTTCAACTCCAAGTAAAAACTATGAATGTGAGCCAATTAGTAGGAGATCGCACGACACAAAACAAGtgccaaaacaatatttttgcaaaGAGTGTCCAGCGAAATTCTTTAAAAGCTCCGCGCTTAATTATCATTTAGGGCTGCACAGCGGAGATGGTGagcataaatgtaaaaaatgcaGCTACGCTGTCAAAAATGTAGGAAACTTGGCAAAACATGAACTGTTGCATGAGAGTGAAGGCAAAATGTCGACATGTGATTACGAATCAGGAGAAGATATggattataaaaatattccacTCTCTGGGACAGATCTGTTTCAAAGAAAGACTGAAGCTCAAAAGCGAGTACTTAACGATAAAGATAAGTTAGTGAAGCCAAATGATCATTTTCCGCCAGTTTTGCAAGCCGATCCACAATTTGGTTATTTAATGCACGGGAATCCCGAATTTATTTATCCAACTTATCTGAAAAATGGTCGGCAAAAAGAGAAACGCTACAAATGCCACAAATGCCCATCGGCTTTTGAGAAAAGGGAACAGTATAAAATACATTTGTCGCTACATGGCTCCAAGCAAAGATATAAATGTGAGCTGTGTGATTATTCTGTCAAGTATTACGCTAACTACGTTCAGCATATGAGGAAACATCAAATGAACGATGAAGCTCATGCTGAACGAAAGAAAATCAAAAGTGGTTTTATTGAATCTGAGCCTATTGAGGACAAAAACGAAGACAGTGACAACATCAAATTAGCAATTAAAACAATGCCGAAAGGAGTTCCTAAAAGTGATTTTCAGCAGTTTTCTATACGCGATCAACAAACACTTCGGATTCTACAAAGAAGGCGTTCTATCAACGGCAAAGAAGAAGCATCACCGTCTGAGGTGTCTCCTACAAAGGATAGAAAGTTACACATGTGTTTATTGTGCCCATATACGAATCAACGGCAAGACGCTTTAGACAACCATTATAGGAGGCACGATGAAAATGATTTACTCAACGGGGGAAACCATAAATGCTCTTATTGCGACTTGGTCGTTGTACAGTCTCATTTCTTACGGGAGCATATGAAGACtcattttcattatcaaaaGAATCTGACACCCGAGTGTTTCGTTGCGAATGACGACGTAAGTTTCAGTTTAAGTAAAGTAGATGACGAGGGAGCGTCTACGGATCTCAATTTAGACGTACAAAGCAAGAGTTTTATAAGTAATGaagaaaaaatgtttgttaaaatCCAAACCGGGGAACTCATGgtcgaataa
Protein Sequence
MQNPERDIVSCHSDSNDGASDTASRKDGMQLGRDCPNQMSPNASADDAKSQKQNRKTPRPLPPLIPLHASTPNQNKTTGEPPAKKFKETPNSELTETNKVLNKLENLPVDISLIPVNNITSNNKETVVRKKINSFFDKLKERLLTETGEEGSLICKSCGFESKCLSEHSVHEKNCTSQMNRSATNTLLPSMSSTRCQNCRHRCKSSADLYVHMQTCRKNERSGDDAATEVKSQDSNEGAGSGQDRDIEPHPMENVVFVWNNIGHNANKYETPLDININDDSTLPENNRNYDPETADDNESMNLSPSQAMGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFVAISVLNDNGETVFHYIDINASADPSIDNDESFNDMTDSMGHPMEIQPLNLQMYGSEQSYDTMDNRNMDMKKPKKTLWKCKKCNYRDSSKEALLEHVREHSRVEGHHEEVKVTKKPDNLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKIKPDNSALLNEITGDTCNKCPFKSSDKKLMIAHLLQHQPSPQSIFKCFFCPFFVKDEHELIQHLILHGVTEPEEYIAKAMGRKSPPPELGLTIPNTSSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGILPKKFETEAELEAKTDLKIEYSLNLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSDVTVYKCLECKFTCDNAFRLAEHSKSHGEIYGRIYCPVEIDVPDEEQIAKLRKVIEAEKANTLESLLKEDRLVHENNEIKILYYCQMCPARFFTGEELKIHDKFHDLSFPNKCNKCEFSVPEECDLISHVAVHTDEYHTKTKMLKFIHNSHGGHKQPNLELVHCPITSDITWVVSTPSKNYECEPISRRSHDTKQVPKQYFCKECPAKFFKSSALNYHLGLHSGDGEHKCKKCSYAVKNVGNLAKHELLHESEGKMSTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAHAERKKIKSGFIESEPIEDKNEDSDNIKLAIKTMPKGVPKSDFQQFSIRDQQTLRILQRRRSINGKEEASPSEVSPTKDRKLHMCLLCPYTNQRQDALDNHYRRHDENDLLNGGNHKCSYCDLVVVQSHFLREHMKTHFHYQKNLTPECFVANDDVSFSLSKVDDEGASTDLNLDVQSKSFISNEEKMFVKIQTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00448640;
90% Identity
iTF_01335492;
80% Identity
-