Emer009119.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eudonia mercurella
Gene Symbol
-
Assembly
GCA_963082485.1
Location
OY720024.1:7402576-7407941[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.16 18 7.2 3.4 2 22 195 215 194 215 0.95
2 16 3.1 3.5e+02 3.2 1.0 1 23 312 334 312 334 0.82
3 16 0.17 19 7.1 0.5 2 23 470 491 469 491 0.96
4 16 2.4 2.8e+02 3.5 0.4 2 23 568 589 567 589 0.94
5 16 0.093 11 7.9 1.5 1 23 597 619 597 619 0.97
6 16 0.14 16 7.4 3.2 1 23 654 676 654 676 0.95
7 16 0.00021 0.025 16.2 4.0 1 23 684 706 684 706 0.99
8 16 0.78 89 5.0 3.0 1 23 785 807 785 807 0.97
9 16 7.4 8.5e+02 2.0 0.4 1 19 863 881 863 885 0.84
10 16 1.5 1.7e+02 4.2 0.8 1 23 891 913 891 913 0.96
11 16 0.034 3.9 9.3 0.8 1 23 980 1002 980 1002 0.94
12 16 0.012 1.4 10.8 1.1 1 23 1008 1030 1008 1030 0.96
13 16 0.006 0.69 11.7 2.6 1 23 1120 1142 1120 1142 0.97
14 16 0.00015 0.017 16.7 1.4 1 23 1148 1170 1148 1170 0.99
15 16 1.6 1.8e+02 4.1 1.6 1 23 1259 1281 1259 1281 0.96
16 16 0.00073 0.084 14.6 3.9 1 23 1292 1314 1292 1314 0.98

Sequence Information

Coding Sequence
ATGCAAAATCCAGAAAGAGACATTGTTAGCTGTCACAGCGACTCAAACGACGGTGCTTCCGACACAGCTTCCAGAAAGGACGGGACGCAGTTGGGACGAGACGGCCCGAACCAGATGTCGCCGAACGCCTCCGCAGATGACGCCAAATCacagaaacaaaacagaaaaacTCCCAGGCCACTACCGCCGCTCATACCGCTGCACGCGTCAACACCGAATCAGAATAAAACAACTACCGGAGAACCACCCGCCAAAAAATTCAAAGAAACCCCTAACTCAGAGCTAacagaaacaaacaaattactaaaCAAATTCGAAAACTTACCAGTTGACATTAGTCTCATACCTGTTAACAATACTTCAAACAACAAAGAAACCGTGGTCCGTAAGAAAATCAATTCTTTCTTTGATAAACTTAAAGAAAGATTGTTAACCGAGACCGGTGAAGAAGGTTCGCTAATATGCAAAAGTTGCAATTTCGAAAGCAAATGCCTTTCAGAACATTCAGTACACGAGAAAAACTGTACTTCACAAATGAATCGGTCGGCTACGAATACCTTGCTTCCAAGCATGAGCTCAACACGCTGCCAAAACTGCCGACATAGATGTAAATCTAGTGCAGACCTTTATGTTCACATGCAAACGTGCAGAAAGAACGAGagaactggagacgccactgagGTAAAAAGCCAAGACAGCAATGAAGGCGCCGGATCAGGACAGGACAGAGACATTGAACCGCATCCTATggaaaatgttgtttttgtttggaACAATATTGGTCATAACGCTAACAAGTATGAAACTCCACTTGACATAAATATTAACGATGATTCAACTCTTCCGGAAAATAATAGGACCTACGACCCTGAAACAGCGGACGATAATGAAAGTATGAACTTATCACCTAGTCAGGCAATGGGCAAGAAAGTGTTCAAATGTCCGCATTGTCCATTCTGGGCCTCGACCGCGTCAAGATTCCACGTACATATTGTAGGGCATTTGAATAAAAAGCCGTTCGAGTGTTCTCTATGCAAGTACAAGTCCAACTGGCGTTGGGATATAACCAAACATATCAAGCTGAAGACGGCCAGAGACCCAGAGCATAACGAAGCGAAAGTACTTATGACAGACGAAACTGGACGAAGAAATTAcagtaaatacaataaattcGTGGCCATATCTGTGTTGAACGACAATGGTGAAACTGTGTTTCATTATATAGATATCAATGCTTCGGCTGACCCGTCGattgataatgatgaaacaTTTAATGATATGACGGATAGTATGGGTCACCCAATGGAGATACAACCCCTCAACTTACAAATGTATGGCAGTGAGCAAAGTTATGATGCGATGGATAGCAGAAATATGGATATGAAGAAACCCAAGAAAACTTTATGGAAATGTAAAAAGTGTAACTACAGAGATTCGTCCAAGGAGGCTCTACTGGAGCACGTGCGCGAGCACTCGAGAGTAGAGGGCAACCACGAGCAGGTGAAAGTTACCAAAAAGCCGGATAACCTCCCGGACCCAGCTGACTTGGCCTATCGCTGCGGCCACTGCAACCAACTGTCCAACTGGAAACATGTCATACAGAGACATTGTCGCTTGAAACATGACGGTGTCATAAAAGTTATAACAACGGTGAAGACAAAACCAGATAACTCTGCGTTGCTGAACGATATCACCGGGGACATGTGCAACAAGTGCCCTTTCAGAAACAGCGACAAGAAGCTCATGATAGCACATCTGCTGCAGCATCAGCCCTCGCCGCAGTCTATCTTCAAATGCTTCTTCTGCCCTTTCTTCGTTAAGGATGAACACGAGTTGATACAACATCTCATTTTGCACGGAGTTACTGAGCCCGAAGAGTACATAGCTAAAGCTATGGGTCGCAAATCTCCGCCTCCCGAAATGGGATTGGCTATTCCGAACACGTCCTCAACGAAACGGCACAGATGCACGGAATGTCCATACGAAACAAAcagcaagtctcaatatatgtaTCATGAACAGTTCCATAGGCTTCCAGCGGATACGCCTTACAAATGCCCGGAGTGTAATTATAGCGTCTCCAAAAGGCATCTACTTCATCAACACTTAAGGGTTCACGGCATACTGCCCAAGAAGTTCGAAACGGAAGCAGAGTTAGAAGCCAAGACAGATCTTAAAATTGAATATTCGTTAAATCTCGATGAGATACCATTTGTGTGGGTTTCGGCCAAAAATGAGTTCCATAAGATGTACAAGTGTCGTTATTGCTCTTATGTGAATTCGCAAAAATGTAAAATTCCTAACCATGAAAAGATTCACTGTATAGTTTTTGAGAACAGTGATGTTATTGTTTACAAGTGCTTGGAATGCAAATTTACTTGTGATAATGCTTTTAGATTAGCTGAGCATTCTAAATCTCATGGCGAAATATATGGCCGTATTTATTGTCCAGTGGAAATCGATGTTCCTGATGAAGAACAAATAGCTAAGCTGAGAAAGGTTATCGAAGCCGAAAAAGCAAACACTCTAGAAGGTCTACTAAAAGAGGACCGACTAATGCACGAGAATAAtgaaatcaaaattttatattactgtCAAATGTGTCCAGCTAGATTTTTCATCGGCGAAGAACTTAAAATTCATGATAAGTTCCATGACCTTTCTTTCCCGCATAAATGTAATAGATGTGAATTTTCGGTTCCTGAAGAATGCGATCTCATTTCACATGTTGCTGTTCACACCGACGAATAtcatactaaaacaaaaatgCTTAAGTTCATACATAACTCCCATGGAGGACACAAACAACCCAATCTCGAGCTCGTCCATTGCCCCATTACGTCAGATATCACGTGGGTGGTGTCAACTCCAAGTAAAAACTATGAATGTGAAACAATTAGTAGGAGAACGCACGACACAAAACAAGTgccaaaacaatatttttgcaAAGAGTGTCCAGCGAAATTCTTTAAAACCTCCGCGCTTAATTATCATTTAGGGCTGCACGGCGGAGATGGTgagcataaatgtaaaaaatgcaGCTACGCTGTTAAAAATGTAGGAAACTTGGCAAAACACGAACTGTTACACGAGAGTGAAGGCAAAATGTCGACTTGTGATTACGAATCAGGAGAAGATATGGATTATAAAAATATTCCACTCTCTGGAACAGATCTATTTCAAAGAAAGACTGAAGCTCAAAAGCGAGTACTTAACGATAAAGATAAGTTAGTGAAGCCAAATGATCATTTTCCGCCAGTTTTGCAAGCTGATCCACAATTTGGTTATTTAATGCACGGGAATCCTGAATTTATTTATCCAACTTATCTGAAAAATGGCCGGCAAAAAGAGAAACGCTACAAATGCCATAAATGCCCATCGGCTTTCGAGAAAAGAGAACagtataaaatacatttgtCGCTACATGGCTCCAAGCAAAGATATAAATGTGAGTTGTGCGATTATTCTGTCAAGTATTACGCTAACTACGTTCAGCATATGAGGAAACATCAAATGAATGATGAAGCTCATGCTGAACGAAAGAAAATCAAAAGTGGTTTTATTGAATCTGAGCCTATTGAGGACAAAAACGAAGACAGTGACAATATCAAATTAGCAATTAAAACAATGCCGAAAGGAATTCCTAAAAGTGATTTTCAGCAGTTTTCTATACGCGATCAACAAACACTTCGGATTCTACAAAGAAGGCGTTCTATCAACGGCAAAGAAGAAGCATCACTGTCTGAGGTGTCTCCTACAAAGGACAGAAAGTTACACATGTGTTTATTGTGCCCATATACGAATCAACGGCAAGACGCTTTGGACAACCATTATAGGAGGCACGATGAAAATGATATACTCAACGGGGGAAACCATAAATGCTCTTATTGCGACTTGGTCGTTGTACAGTCTCATTTCTTGCGGGAGCATATGAAGACTCATTTTCATTATCAAAAGAATCTGACACCAGAGTGTTTCGTTGCGAACGACGACGTTAGTTTCACTATAAGTAAAGTAGATGACGAGGGAGCGTCTACGGATCTCAATTTAGACGTACAAAGCCAGAACTTTATAAGTAATGAAGAAAAAATGTTTGTCAAAATCCAAACCGGGGAACTCATGGtcgaataa
Protein Sequence
MQNPERDIVSCHSDSNDGASDTASRKDGTQLGRDGPNQMSPNASADDAKSQKQNRKTPRPLPPLIPLHASTPNQNKTTTGEPPAKKFKETPNSELTETNKLLNKFENLPVDISLIPVNNTSNNKETVVRKKINSFFDKLKERLLTETGEEGSLICKSCNFESKCLSEHSVHEKNCTSQMNRSATNTLLPSMSSTRCQNCRHRCKSSADLYVHMQTCRKNERTGDATEVKSQDSNEGAGSGQDRDIEPHPMENVVFVWNNIGHNANKYETPLDININDDSTLPENNRTYDPETADDNESMNLSPSQAMGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKTARDPEHNEAKVLMTDETGRRNYSKYNKFVAISVLNDNGETVFHYIDINASADPSIDNDETFNDMTDSMGHPMEIQPLNLQMYGSEQSYDAMDSRNMDMKKPKKTLWKCKKCNYRDSSKEALLEHVREHSRVEGNHEQVKVTKKPDNLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKTKPDNSALLNDITGDMCNKCPFRNSDKKLMIAHLLQHQPSPQSIFKCFFCPFFVKDEHELIQHLILHGVTEPEEYIAKAMGRKSPPPEMGLAIPNTSSTKRHRCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGILPKKFETEAELEAKTDLKIEYSLNLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSDVIVYKCLECKFTCDNAFRLAEHSKSHGEIYGRIYCPVEIDVPDEEQIAKLRKVIEAEKANTLEGLLKEDRLMHENNEIKILYYCQMCPARFFIGEELKIHDKFHDLSFPHKCNRCEFSVPEECDLISHVAVHTDEYHTKTKMLKFIHNSHGGHKQPNLELVHCPITSDITWVVSTPSKNYECETISRRTHDTKQVPKQYFCKECPAKFFKTSALNYHLGLHGGDGEHKCKKCSYAVKNVGNLAKHELLHESEGKMSTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAHAERKKIKSGFIESEPIEDKNEDSDNIKLAIKTMPKGIPKSDFQQFSIRDQQTLRILQRRRSINGKEEASLSEVSPTKDRKLHMCLLCPYTNQRQDALDNHYRRHDENDILNGGNHKCSYCDLVVVQSHFLREHMKTHFHYQKNLTPECFVANDDVSFTISKVDDEGASTDLNLDVQSQNFISNEEKMFVKIQTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00448640;
90% Identity
iTF_01335492;
80% Identity
-