Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: -
Assembly: GCA_030522865.1
Location: JAPYZN010000004.1:4884-9858[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.2e-13 2.3e-09 37.8 0.0 1 39 325 364 325 368 0.90

2 4 2.5e-12 7.1e-09 36.2 0.1 2 39 380 417 379 420 0.94

3 4 9.2e-19 2.6e-15 56.8 0.0 2 45 435 479 434 479 0.97

4 4 1e-18 2.9e-15 56.7 0.1 1 42 486 528 486 529 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.2e-13	2.3e-09	37.8	0.0	1	39	325	364	325	368	0.90
2	4	2.5e-12	7.1e-09	36.2	0.1	2	39	380	417	379	420	0.94
3	4	9.2e-19	2.6e-15	56.8	0.0	2	45	435	479	434	479	0.97
4	4	1e-18	2.9e-15	56.7	0.1	1	42	486	528	486	529	0.97

Sequence Information

Coding Sequence: ATGAGCAGGCTGGAGGGTTGGTCGATACGGCCCTGGGGTCTCGACAgctccctcctccccctcttCATTCTTCCGGCGGGCGTTTTTGCCTTCTCCACCGCTGGCTGCGACACCCCCTTCGACGTCACTGTCGCTGGTTCTCTGCTAAAAACGGCCGATCAATTGAAGATCAAGGGCCTCTGCGAGGTACCCGAGAGTAAGGAGGGATCGGCATCAGTCAGCCTGAGTTCACCACCACGAGAGCCTGGTACACCACGATTAAACTACACAAAGTTGAAGAGACATCATCCCAAGTACAAAAGAGCGAGAACATCGTTTGACGCGATAACAGGGAGTACAGACACAAGGCACTACGACAAGTACAAAGACGAGGATAACGAGGGTGGTAGTGGGGCCACTGATTTTGGCTTTGaacgagaaaataataaagagAATCACCGAAGTGACTGGCAGACAACGACGGAGGATGAGGAGTGTGGCGCTGAGGCAGTAGTCCTGGAATCCTGCCAACGAGACATCAACAACGGTAACGGAACAAACAACAATAACGGTGATATGTTTTGTCACACAGGACTAGGACATTATGGCCATCATCCGGACCCAGGGGATGTTGATTTGCCCCCAGAAACACAACCCACACCACCTAGTGCCACACTGGTCGGCACCACTGTCACGCATTTGCGAGACTCAGATCATGTCACAGATATTCAGAATTGTGACAGTGTTAAGATAAAGTTTGAAACCCTCCATACGATGGACTCGTCAGACACAATTGACATAGACAGCCACATGTCGGATCGTGCCAGTGTCAGTTCGAAGCATGGAGCTGAGAGTGACAATATGATGATGATAACACCCGAGCTTTTGGGTCTAATGCCATCGGGAAGTTCTGTACACTCGGACTCGGGGGAGAATAATTCCCGGGGACATTCTGGGGGCTCGGGACATTATCATGGTACATCCAAATCGTGGACGCAGGAGGATATGGATGCTGCACTTGAGGCACTTAGAAATCATGACATGAGTTTAACTAAAGCTTCTGCAACATTTGGAATCCCCTCAACGACGTTATGGCAGCGAGCCCACCGTCTGGGTATAGACACACCAAAAAAAGATGGTCCAACAAAATCATGGAGCGATGAGAGTCTGAACAATGCCCTTGAGGCCCTGAGAACCGGTACGATATCGGCGAATAAAGCATCAAAAGCATTTGGAATACCGTCCAGTACATTGTACAAAATAGCCAGAAGGGAGGGTATACGATTGGCAGCGCCATTCAACGCGAGTCCAACTACTTGGTCGCCAGCGGATCTTGACAGAGCACTTGAAGCCATCAGATCCGGTCAGACATCGGTCCAGAGGGCCTCCACCGAGTTTGGCATACCCACGGGGACACTATACGGTAGATGTAAGCGTGAGGGCATTGAATTGAGCAGGAGCAATCCAACTCCCTGGAGCGAGGACGCCATGACTGAAGCGCTCGAGGCTGTTCGACTGGGTCACATGAGCATCAATCAAGCAGCTATACATTACAATTTGCCGTACTCATCTCTTTATGGGCGCTTCAAGCGTGGAAAATACGAAGAGCCAGTGGTTAACGAAATGTCACAGGACGGTACAAGTCAACATTTCCATCAGAGCCCACATCAGAATCACTCATCACCGCTTCCCGATCAAATGCCATACCAGGGTAGCTGA
Protein Sequence: MSRLEGWSIRPWGLDSSLLPLFILPAGVFAFSTAGCDTPFDVTVAGSLLKTADQLKIKGLCEVPESKEGSASVSLSSPPREPGTPRLNYTKLKRHHPKYKRARTSFDAITGSTDTRHYDKYKDEDNEGGSGATDFGFERENNKENHRSDWQTTTEDEECGAEAVVLESCQRDINNGNGTNNNNGDMFCHTGLGHYGHHPDPGDVDLPPETQPTPPSATLVGTTVTHLRDSDHVTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHGAESDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGGSGHYHGTSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGTSQHFHQSPHQNHSSPLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00438668;
80% Identity: iTF_01273010;