Dall002409.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- bab2
- Assembly
- GCA_001412515.3
- Location
- NW:856359-895213[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.3e-13 8.4e-10 37.6 0.0 1 39 385 424 385 428 0.90 2 4 2.9e-12 2.6e-09 36.1 0.1 2 39 440 477 439 480 0.94 3 4 1e-18 9.4e-16 56.7 0.0 2 45 495 539 494 539 0.97 4 4 1.2e-18 1.1e-15 56.5 0.1 1 42 546 588 546 589 0.97
Sequence Information
- Coding Sequence
- ATGGTAAGCGGAGGGATGGCCGGGCAGCACTACTGCCTGCGGTGGAACAACTACCAGTCGAACATGACATCTGTTTTTCACCAACTACTTCAGACTGAAGCCTTCGTGGACGTCACACTCGCCTGCAATGAGGCCTCGCTAAAGGCGCACAAGGTGGTTCTGTCGGCCTGCAGCTCGTACTTCAAAAAGCTGCTGCTCTCGAATCCCTGCAAACATCCGACAATCATAATGCCCCAGGACGTGTGTTTCAATGATCTCAAGTTTATCATTGAATTCGTTTACAAGGGCGAGATCGACGTGTCCCAGGCGGAACTGCAGTCTCTGCTAAAAACGGCTGATCAATTGAAGATCAAGGGCCTCTGTGAGGTGCCTGAGAGCAAAGAGGGATCGGCATCAGTCAGTCTGAGTTCACCACCCCGAGAGCCTGGTACACCACGATTAAACTACACCAAGTTGAAGAGACATCATCCCAAGTACAAAAGAGCGAGAACATCGTTTGAGGCGATAACAGGGAGTTCAGACTCAAGGCACTACGACAAGTACAAAGACGAGGATAACGAGGGTGGTAGTGGGGCCACTGATTTTAGCTTTGGACGGGAAAATAATAAAGAGAATCACCGAGGTGACTGGCAGACAACGACGGAGGATGAGGAGTGTGGCGTTGAGGCAGTAGTCCTGGAATCCTGCCAACGAGACATCAACAACGGTAACGGAACAAACAACAATAACGGTGATATGTTTTGTCACACAGGACTAGGACACTATGGCCATCATCCGGATCCAGGGGATGTCGATTTGCCCCCGGAAACGCAACCAACACCACCCAGTGCCACCCTGGTGGGCACGACTGTCACGCATCTGCGAGACTCAGATCATGTCACAGATATTCAGAACTGCGACAGTGTTAAGATAAAGTTTGAAACCCTCCATACGATGGACTCGTCAGACACAATTGACATAGACAGCCACATGTCGGATCGTGCCAGTGTCAGTTCGAAGCATGGTGCTGAGAGTGACAATATGATGATGATAACACCCGAGCTTTTGGGCCTAATGCCGTCGGGGAGTTCTGTGCACTCGGACTCGGGGGAGAATAATTCTAGGGGACATTCTGGGGGCTCGGGACATTATCATGGCACTTCCAAGTCGTGGACGCAGGAGGATATGGATGCTGCACTTGAGGCACTTAGAAATCATGACATGAGTTTAACTAAAGCTTCTGCGACATTTGGAATTCCCTCAACGACGTTATGGCAGCGAGCCCACCGTCTGGGCATAGACACACCAAAAAAAGATGGCCCAACAAAATCATGGAGCGATGAGAGTCTGAACAATGCCCTTGAGGCCCTGAGAACCGGCACGATATCAGCGAATAAAGCATCAAAGGCATTTGGAATACCGTCCAGTACATTGTACAAAATAGCCAGAAGGGAGGGTATACGATTGGCAGCGCCATTCAACGCGAGCCCGACAACCTGGTCACCAGCGGATCTTGACAGAGCACTGGAGGCCATCAGATCCGGCCAGACATCGGTTCAGAGGGCCTCCACCGAGTTTGGCATACCCACGGGGACGCTATACGGTAGATGTAAGCGTGAGGGCATTGAATTGAGTAGGAGCAATCCAACTCCCTGGAGCGAGGACGCCATGACTGAGGCGCTGGAGGCTGTTCGGCTGGGCCACATGAGCATCAATCAAGCAGCTATACATTACAATTTGCCGTACTCATCACTGTACGGACGCTTCAAGCGTGGAAAATACGAGGAGCCAGTGGTTAATGAAATGTCACAGGACGGTACAAGTCCACATTTCCATCAGAGTCCACACCAGAATCACTCATCACCACTTCCCGATCAAATGCCATACCAGGGCAGCTGA
- Protein Sequence
- MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFKKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESKEGSASVSLSSPPREPGTPRLNYTKLKRHHPKYKRARTSFEAITGSSDSRHYDKYKDEDNEGGSGATDFSFGRENNKENHRGDWQTTTEDEECGVEAVVLESCQRDINNGNGTNNNNGDMFCHTGLGHYGHHPDPGDVDLPPETQPTPPSATLVGTTVTHLRDSDHVTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHGAESDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGGSGHYHGTSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGTSPHFHQSPHQNHSSPLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00438668;
- 80% Identity
- iTF_00438195;