Fari002941.1
Basic Information
- Insect
- Fopius arisanus
- Gene Symbol
- bab2
- Assembly
- GCA_000806365.1
- Location
- NW:732127-748419[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.9e-13 7.4e-10 37.6 0.0 1 39 395 434 395 438 0.90 2 4 1.8e-12 2.3e-09 36.0 0.1 2 39 450 487 449 490 0.94 3 4 6.6e-19 8.3e-16 56.6 0.0 2 45 505 549 504 549 0.97 4 4 7.5e-19 9.5e-16 56.5 0.1 1 42 556 598 556 599 0.97
Sequence Information
- Coding Sequence
- ATGAGTGATTTTCCCCGGTACTGGGGCACTCACTACAGCGGAGGGATGGCCGGGCAGCACTACTGCCTTCGGTGGAACAACTACCAGTCGAATATGACGTCGGTTTTTCACCAGCTCCTGCAGACTGAAGCCTTCGTCGATGTCACACTTGCATGCAACGAGGCCTCGCTAAAGGCGCACAAGGTGGTGCTGTCGGCATGCAGTTCATACTTCAAGAAATTACTGCTCTCCAATCCCTGCAAACATCCCACTATCATTATGCCCCAGGACGTCTGCTTCAATGATCTCAAGTTTATCATTGAATTCGTCTACAAGGGCGAGATCGACGTGTCCCAGGCGGAACTGCAGTCGCTGCTAAAAACGGCTGATCAATTGAAGATCAAGGGCCTCTGTGAGGTACCTGAGAGCAAAGAGGGATCGGCATCAGTCAGTTTGAGCTCACCACCACGGGAGCCTGGTACACCTCGATTAAACTACACCAAGTTGAAGAGACATCATCCAAAGTACAAAAGAGCGAGAACGTCGTTTGAGGCGATAACCGAAAGTGCAGACACAAGGCACTACGACAAGTACAAAGACGAGGATAACGAGGGTGGAAGTGGCACCACCGATTTTCCCTCCAGCcgggaaaataataaagagAATCACCGAGGTGACTGGCAGACAACGACGGAGGATGAGGAGTGTGGGGTTGAGGCAGTAGTCCTGGAATCCTGCCAACGAGACATCAACAACGGTAACGGAACAAACAACAATAACGGTGATATGTTTTGTCACACAGGATTAGGACATTATGGACATCATCCAGATCCAGGAGATGTCGATTTACCTCCTGAAACCCAGCCAACACCACCTAGTGCCACCCTGGTGGGCACAACAGTCACTCATCTGCGAGACTCAGATCATGTCACAGATATTCAGAACTGCGACAGCGTTAAGATAAAGTTTGAAACCCTCCACACGATGGACTCGTCAGACACTATTGACATAGACAGCCATATGTCTGATCGTGCCAGTGTCAGCTCGAAGCATGGGGCTGATAGTGACAATATGATGATGATAACACCCGAGCTTTTGGGTCTTATGCCATCGGGTAGCTCCGTACACTCAGACTCGGGGGAGAATAATTCTAGGGGACATTCTGGAGGCTCGGGACACTATCACGGTACATCCAAGTCTTGGACACAGGAGGATATGGATGCTGCCCTCGAAGCACTTAGAAATCATGACATGAGTTTAACTAAAGCTTCTGCGACATTTGGAATTCCATCAACAACGTTATGGCAGAGAGCCCATCGTCTGGGTATAGATACACCAAAAAAAGATGGTCCAACAAAATCGTGGAGTGATGAGAGTTTGAACAATGCCCTGGAGGCTCTGAGAACCGGCACGATATCAGCGAATAAAGCGTCAAAGGCATTTGGAATACCGTCCAGTACATTGTACAAAATAGCCAGAAGGGAGGGTATACGATTGGCAGCGCCATTCAACGCGAGTCCAACAACCTGGTCACCAGCGGATCTTGACAGAGCACTGGAGGCCATCAGATCCGGCCAGACATCTGTCCAGAGAGCATCCACCGAGTTTGGCATACCCACGGGGACACTCTACGGTAGATGTAAGCGAGAAGGCATTGAGTTGAGCAGAAGCAATCCAACTCCCTGGAGCGAGGACGCTATGACCGAGGCCCTCGAGGCGGTTCGGTTGGGTCACATGAGCATCAATCAAGCAGCTATACATTACAATTTGCCGTACTCATCCCTGTACGGACGCTTCAAGCGTGGAAAATACGAGGAGCCAGTGGTTAATGAAATGTCACAGGATGGAACAAGTCCACATTTCCATCAGAGTCCACACCAGAATCACTCATCACCACTTCCTGATCAAATGCCATACCAGGGCAGCTGA
- Protein Sequence
- MSDFPRYWGTHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFKKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESKEGSASVSLSSPPREPGTPRLNYTKLKRHHPKYKRARTSFEAITESADTRHYDKYKDEDNEGGSGTTDFPSSRENNKENHRGDWQTTTEDEECGVEAVVLESCQRDINNGNGTNNNNGDMFCHTGLGHYGHHPDPGDVDLPPETQPTPPSATLVGTTVTHLRDSDHVTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHGADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGGSGHYHGTSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGTSPHFHQSPHQNHSSPLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00438668;
- 80% Identity
- iTF_00728745;