Dall001046.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diachasma alloeum
Gene Symbol
-
Assembly
GCA_001412515.3
Location
NW:73172-85454[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 4.5e-06 0.00034 20.3 1.0 1 23 218 240 218 240 0.98
2 31 0.0019 0.15 12.0 1.9 1 23 263 286 263 286 0.96
3 31 0.00016 0.012 15.4 1.0 2 23 293 315 292 315 0.96
4 31 0.00015 0.012 15.5 0.5 1 21 335 355 335 356 0.95
5 31 0.0041 0.31 11.0 0.2 2 23 448 469 447 469 0.96
6 31 0.061 4.6 7.3 0.1 1 23 475 498 475 498 0.86
7 31 8.4e-05 0.0064 16.3 0.1 1 23 561 584 561 584 0.96
8 31 0.0075 0.56 10.2 0.4 1 23 590 613 590 613 0.96
9 31 0.11 8 6.6 1.9 1 23 626 648 626 648 0.97
10 31 2.5e-05 0.0019 18.0 1.0 3 23 689 710 687 710 0.95
11 31 0.11 8 6.6 1.3 2 23 767 790 766 790 0.94
12 31 2.2 1.7e+02 2.4 0.0 2 23 799 821 799 821 0.84
13 31 0.023 1.8 8.6 0.0 2 23 828 850 827 850 0.95
14 31 9.3e-06 0.0007 19.3 1.2 1 23 858 880 858 880 0.98
15 31 0.042 3.2 7.8 0.5 3 23 912 934 910 934 0.86
16 31 0.00015 0.011 15.5 3.3 1 23 937 960 937 960 0.97
17 31 0.0051 0.38 10.7 0.4 2 23 967 989 966 989 0.95
18 31 0.0023 0.17 11.8 5.1 1 21 1015 1035 1015 1036 0.95
19 31 0.0019 0.15 12.0 1.8 2 23 1050 1071 1049 1072 0.93
20 31 0.16 12 6.0 0.9 1 23 1075 1098 1075 1098 0.94
21 31 0.0043 0.32 11.0 1.9 2 23 1105 1126 1104 1126 0.95
22 31 0.69 52 4.0 0.2 2 23 1134 1156 1134 1156 0.95
23 31 2.6 2e+02 2.2 0.0 2 23 1163 1185 1162 1185 0.87
24 31 0.16 12 6.0 2.7 2 23 1194 1216 1194 1216 0.96
25 31 0.74 56 3.9 2.4 2 23 1222 1244 1222 1244 0.93
26 31 0.43 33 4.6 0.1 1 23 1299 1322 1299 1322 0.93
27 31 0.00043 0.033 14.1 1.0 1 21 1347 1367 1347 1368 0.94
28 31 0.35 27 4.9 1.3 2 23 1466 1488 1465 1488 0.94
29 31 0.54 41 4.3 0.6 2 23 1495 1517 1494 1517 0.94
30 31 0.5 38 4.5 2.5 1 23 1528 1550 1528 1550 0.97
31 31 1.4 1.1e+02 3.0 0.2 3 19 1559 1575 1559 1578 0.93

Sequence Information

Coding Sequence
ATGGAGTCGAGGGAGCGTTACGACGAATTGTGCAGGCTGTGTGCCTCCTACGACGCTGTAAAAATGGATATATTCGGACAGGAGGGCAAGAATCGTCAGCTAGTCGACAAGATCCAGACGTGTCTTCCCTTCAAGATCGCTGAGGACGATCGACTGCCAAAGTGTTTGTGCTACAGATGTATGTACAATCTTGAGAATTTCTACGACTTCAGAACAGCCTGTGTTAATGCTGTTGCTGTATTGGAGAGATCTCTACCACCGAGTGATTCGAAAAATGGAGAGGCGCAAAACGACACAGAGAAGCACTTGGAATTGCGTTCGGAGTTACTCAAAGAGAAGGAGAAAATGCCAATTTTGATCCCAGAGGCGCCAATAGTGAATCCAAATGCAGCCCTGGGCACTCCGCCTCGATTAAACTCGGATGGCGAGGCAGATCCCGAGATTGAAGAAGTGATGGACCAAAGTGGAACAGACGAAGGAATGGACGACGCAGAGGACCGAAAATCCGACGAGTACGAGATGGACATGGAGACGAACCCCAGTGACTTTCTGGAGATGCCCCCAATGGTGACTGACGACGCTGAGGACCCCCACAATCAGCACATACCCACCCCAGCACCCTTCCAACACACCTCAGAGCAGCACGAAGTATACGTATGCTCCCTCTGCAACAAGGCATTCAGCTCCAAGGGTCACTTGTCCCTCCACGCTCGAATTCACGTGGGTGCAGGCGACGTAATAGGCGAGAAAGTCATAACCGACGATCACACATCATACAAACGTCCATACCAGTGTGATTTGTGCAACAAATCTTACTCAACAGCTAAACACAGGTGGGGGCACGTGTCGACAACTCATCGAGGCCATCCAGCAGTCACTTGCAGATACTGTTCACGAATATATTCAACAAGAACAAATCTCGAGGAGCACATAAAGTCGAGACACACTGGTCTCCCCCCACCACCGGAGATGCCTGTGCCCTATGTCCAACAGGACACTAGATATCAGTGCAAAACCTGTCCAAAAATGTACACAAATGTCACAGATTTGAACAAACACAGTAGAGTGTGCCTGGGTGATCGTCAGAGTGAACCCAGTCGAGTGCCTGTTCAGCCCAAGGGCAGATGTCTGATGGACACGTCAGACATGTCGAGTTTAGAGTCCGACGAGGAGAACAGGGAGTACCGAAATGCTGAGGCAAAACTCTCAAAAAATCCCCAGTTAACAATTCTCAAGCAAGCCTTGACGAGAACAGAGGGCCtgaaacgagacgagaagacCTCCCCCTACAAATCTCTGAAATCCACGAAAAATGGCAATGAACAGGAGACGAAAAAATGGTACTGTGAATTTTGTCCTCAGAATTTCACCTCAGTGGATGCCCTCAAGGATCACGAGACAACTCACGACTCTGATAAACCTTACATCTGCATTTTGTGCGAAAAAGATTTTGTCCTAAAGTCGTCTCTCAGTCGTCACATCGTTGCGTCTCATGGAGTTGATCCAGTGCCAATAATCGACAGTGATACTTGTCTAAAGAAGAATGTACTAGCTAAATCAAGGATTGATGAGTTGAAACGTGAGCCGTCCGCCTCGCCATTCTCACCAGAGCCTAGGATAGGTAATGATGACGATGATCCCGAGAGTAGAGACGACAATATGATTGAAATTGAGACTGTATTTGTGTGTGAAATATGCACCAGGGACTTTAACGATCGTGCATCACTCTGGCTGCACATTCGAGCAACTCACAAAGAATTTGCTGCATTTGCCTGTGGTGTTTGTTTGAAAATATGCTCGGATAATGAGCAATTGTTGAGTCACGTTAACATGTACCATGGGGGATCTAAGCTACTGGTGTCTGAGCAGAGAAGGTACAGTTGTACGATATGTGGACGTCAGCATGACTCCAGAAAGAAACTAATGACCCACGTGTCGATTCATAATATCGATCCCACGTACGACCCAGCGAGTTTCGTTCAACTGAACAGCAATTACTACAACGAAAGTTTGAATAACGAGCAAGAGGGTGATTTTGACGCTGAGGACGGGGAGAAGGTCAACTGCTACGTCTGCAGAAAGTCATTTCCCAATGAGGACCACTTGATTCGCCACCAGAGGAATGCCCACAAGAGCGAGCAGAGCGGTGAACCCTCGGCAAATGGAGGATTAAATTCAAATGGTAACAAGGCGCAGTACCACTTGTTCTTCGTCTGCGAGCTCTGCAACAGCTCTCATCCATCGAAGTGGGAGCGATGGCTGCACGTGAGCAGTGTTCACGGTGAGGAAACCTCCATCAGGTGTGAGAGATCAGACTGTGCCAAGATATTTGCGACTAAATCACTGAAGAATGAGCATCTGCAGCACCACTTGCTGCAGGGCTCGTCCCCCAATACCTGCGAAATATGTGGGAAATTGTGGGGCAGCAGAGTGGACTACTGGAAGCACGTGATGGGTGTCCATGCCGACACTGTTCCCCTCATCTGTGGAGTATGCTTGAAGGTATTCCCAGACGTCGTTCAGCTGAGCAGTCACGTAAAGTCGAATCACTGGCCACTGACGAATGGCGACTTCAGTTGTGACATCTGTGGACGTCCTTATTCCAACAAATCGAAGATGTCGAGGCACAGAAAAATACATGGGATTGATAACGACGGGGTGAACAATGGCATCAACGAATCGATGAACGACACTGTTAATTCAGAGCACAGCCCGCCTGAGGTGGACCTCAGCTGTGAAATGTGCGCTGATTTGAGTTTTTCGTCGTGGGAGGATTTGTGCAATCATCGTCGATTGATTCATGCACTTTTCCCCTGTGATCTGTGTAACAAGTGCTATGGGAGGACTTCACACCTGTGGAAACACGTGAATAGAGTTCACAAGGGGCACAAAGACGTGACTTGTTCTTACTGCATGAAAACTAGTGCTTCCAAGGATCATTTAGCAGCGCACATTGCTAAAATTCATCGTTACGAGCCGGAAACCAAGGAGTGCAAGGACACTGGCAGTTATCAATCACCAAGTGCTGAGGAGGATGTCATTCATCACTGCGAGAAGTGTAATAAAGGCTTCCACAAGAGGTATCTCTTAAGACGTCACATGAAAGGCTGTCAGAATTATCGTAAAGATCCTGGGGCATTGCTGACACGATGCAGAGCATGCGAGAGAATCTTCAAGGATCGTGCAAGCTTGCAAAAACATATCGAAAATCATCACAGTAGTTATACTTGTCACTTGTGTGACGAAACAATCACATCGAAATTGGGAATTATGACTCACAATAGGATTAATCACATGAATCATCCTGATTTGACTTGTAGCAGTTGTAAGAAGCTTTTTAGAACGCGAGAGGACCTGGAGTCACATAAGAAGGACCACAAATATCACAATTCACCGAATGTCTGTGATTTCTGTGGTGACACTGttgagaataaattgaaattgaaaatgcacATTCTGTCACTTCACAGAAATGAAATTGGGGTTTCTTGTGGGGTGTGTTTGATCCCTATGAAGGACCCGAAGGATTTGAAGAAGCACGTGGAGGACGTGCATGGCAGTATACTCCTGAAGCCAAATACCTGCCAGGTATGTGGGAAACAGTACGCCTCGAAGTGGAAGGCATTCGATCACACGAAGAAGTGTCATGGAAAGGTCTTCAGAACGTGCAAACAATGTTTAGCAGTATTTACCACTGATTCTGAAATCAAACATCACTATGAGCACGTCCACAACGTCCCTAAGGATCAATTATCAGGCTTTGAGAATCACGTGGACGTAGCTAGTAAGCCAGAGGATCCAGTGGCTGTTAAGGACGAGCCGGAAGATGTCGACGAAGAGGACAACTACGAGGAAAGCCCCCAGGTGTCGGAAAAACGCAAGCGATCTGACACCTTCGACTGTGAAATCTGTCCAGAGATATTTCTCAATGATGAAACACTGTCAGAGCACTACAAAAACGTTCACAACAAGGATCCCGAGAGAATGTTCAAGAAGATGAAGACAAGCACAAAGAAGAGGATGAGAGCTAGAGAGAATTTTGAGTGTAAAAATTGCACCAAACAGTTCAGTACAAAAACACTATACTGGAATCACATTGACACCTGCACTAGGAGGAGTTCGAGGGACGATTCAAGGCCTGGTTCTACCTCAATCCTGGAGACACATCTAAAGAATAATAATCAGATTAAGAAGGAGCCACAGGAGGCAGGGATGAATGAATCAAACCTCAACATTCCAGACTTCAATCTCTTCGAGGATATAAATCTCCAGTTATCAGCGCAGAAGCCAATTCCAAATCTGATGCCCCTGTCCCAAGTGAAGATGGCACAGAGCTTGAAGTGCTACAGAAAGGACTCGAGAAAGGTGTACGACGAGTCGACGAATACAGTGTGTGCCTGTGAGGTTTGTGGCAAGCAGTGGCCAGCGAAGAAGCATCTGTGGCAGCATTTGATAAGATTTCATCGAGCTGAGGCTGCTGTCACTTGCGGTGTCTGCTTGAAACTTTGCGCCACTTACAAAGATCTGTCGCAACACCTCAAGGACGCCCACGAGGCCATTCTCACCTGCGAGGGGAATAACTTCACCTGCAAAACGTGTGGGAGGTACCACAATGCGAGGAGCAAACTCTTGTTGCACATGAGCATtcatattaataataatgagcaCGTCTGGTGTTCAAGGTGTGCCACGAGCTTCGAGACGCAGGAGAAATTGGATCAACATGCTGATAAGTGTCTTGTCAAGAGAAGAGAGGCTGAGTCCGAGGATCACAGTATCGATAACGACGACGACATGATGAAGCATGAGAATGAAGAGGATAAGGGGAGCTTGATTGGAGATGGGGCCTCGCTCATGGAGGAAGTGGAGGAGGACGTTGATTTTGATTCTGAACAGGAGGGAAGTGATAATGGGGAGAACACGGAGCATTCTGAGGACTCTGAGGATAGCAGTGACTCTGGGAGTGATGAGGATAATGACGAGCAGGAGGAGAACGAGTCGAGGGCGAATAGCAGAGTCACTGGGGACGTCAGTGAGTCCGAGGAGGAGGATGGAGATTCAGATACACCTGAGGCAGTTTCTGAAGTACCTGAGGAGAGAGTACCTATGAAAGATAATGAATCGAGTGTTGTACCTGAGGAGAGCGAACAAAGGGAGGTGGAGAAAGCGTCAAAGCCTTTGAAATCTGGTAAAGGGGTCAAGGGGAAGCCCGAGGGCAAGTCTAGAGAGGACTCTGATGATGAGGGGCCACCGATATTGAGCCCCATGATGCCACTACCAGCTGGGAACCAGCGTGGTGTTGCTGAACGTCCTGAGGAGGAGAACTCTGAGAAGATGAGGCCAGAGGGGTCACCGAGTGTCAAGGAAGAGGGGGAGGAGGACGAAATTCCAGAGCTGGATGGAATTGAGAGTGGTGAAAAGGAGGGTCTGTCTCCACACTCTAATGGGGATTATGATGAGTACTCCTCGACTGTTAAATCAGCGAGTGCAGTGGCATCTGCTGAGGAGGACTCTAATGAGGAGATGGACGATGATGACAGTCGGCTGCAGATCGATCAGACTGGTGAGTCCAATTCCCAGGGGTCTGAggcggaggaggaggaggaggggatGGCTGTGGCTGATGAGGAGGATGAGGGGGATGACGAGGAGGGAGGTGAGGTACAGATGGAGGGACTCGATGGAACTGTCCTCGTGGTTGCCAATGATGCTGATGGCAATCAGATATTGATTCGACGGAGTGTCTCGGAAATGGGggatgatgaggatgatgagTCCATGGGGGAAGTGGAAGGATTTATTTATCAGGAAGAGAATgagaatgagaatgaaaatgagaatgaaaatgaaaatgagaatgaaCATGAGAGTGATGATGACAACGAGAATGAGAATGAAATCCAGGAACATGATGTGGACGAGAATGATGAGGAGGGCTACAACAACGAAGTTGATAATGATGTTGAGGAGGAAGTGGAGGAGATGGAGGTGGAGGAGGGCGACAAGACTGGTGAGGAGGGGGACGACACTGATGACAATTCAAGTGCCAAAAACAATGTGTCAAGGACGTAG
Protein Sequence
MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVAVLERSLPPSDSKNGEAQNDTEKHLELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADPEIEEVMDQSGTDEGMDDAEDRKSDEYEMDMETNPSDFLEMPPMVTDDAEDPHNQHIPTPAPFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHTGLPPPPEMPVPYVQQDTRYQCKTCPKMYTNVTDLNKHSRVCLGDRQSEPSRVPVQPKGRCLMDTSDMSSLESDEENREYRNAEAKLSKNPQLTILKQALTRTEGLKRDEKTSPYKSLKSTKNGNEQETKKWYCEFCPQNFTSVDALKDHETTHDSDKPYICILCEKDFVLKSSLSRHIVASHGVDPVPIIDSDTCLKKNVLAKSRIDELKREPSASPFSPEPRIGNDDDDPESRDDNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLSHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPTYDPASFVQLNSNYYNESLNNEQEGDFDAEDGEKVNCYVCRKSFPNEDHLIRHQRNAHKSEQSGEPSANGGLNSNGNKAQYHLFFVCELCNSSHPSKWERWLHVSSVHGEETSIRCERSDCAKIFATKSLKNEHLQHHLLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVVQLSSHVKSNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGIDNDGVNNGINESMNDTVNSEHSPPEVDLSCEMCADLSFSSWEDLCNHRRLIHALFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCSYCMKTSASKDHLAAHIAKIHRYEPETKECKDTGSYQSPSAEEDVIHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCDETITSKLGIMTHNRINHMNHPDLTCSSCKKLFRTREDLESHKKDHKYHNSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHGSILLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSEIKHHYEHVHNVPKDQLSGFENHVDVASKPEDPVAVKDEPEDVDEEDNYEESPQVSEKRKRSDTFDCEICPEIFLNDETLSEHYKNVHNKDPERMFKKMKTSTKKRMRARENFECKNCTKQFSTKTLYWNHIDTCTRRSSRDDSRPGSTSILETHLKNNNQIKKEPQEAGMNESNLNIPDFNLFEDINLQLSAQKPIPNLMPLSQVKMAQSLKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYKDLSQHLKDAHEAILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHVWCSRCATSFETQEKLDQHADKCLVKRREAESEDHSIDNDDDMMKHENEEDKGSLIGDGASLMEEVEEDVDFDSEQEGSDNGENTEHSEDSEDSSDSGSDEDNDEQEENESRANSRVTGDVSESEEEDGDSDTPEAVSEVPEERVPMKDNESSVVPEESEQREVEKASKPLKSGKGVKGKPEGKSREDSDDEGPPILSPMMPLPAGNQRGVAERPEEENSEKMRPEGSPSVKEEGEEDEIPELDGIESGEKEGLSPHSNGDYDEYSSTVKSASAVASAEEDSNEEMDDDDSRLQIDQTGESNSQGSEAEEEEEGMAVADEEDEGDDEEGGEVQMEGLDGTVLVVANDADGNQILIRRSVSEMGDDEDDESMGEVEGFIYQEENENENENENENENENEHESDDDNENENEIQEHDVDENDEEGYNNEVDNDVEEEVEEMEVEEGDKTGEEGDDTDDNSSAKNNVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00438921; iTF_01273963; iTF_01273263; iTF_00351335; iTF_00168686; iTF_00047440; iTF_00048133; iTF_00046423; iTF_00728799;
90% Identity
iTF_01273963;
80% Identity
-