Alep009412.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- -
- Assembly
- GCA_963942555.1
- Location
- OZ012612.1:19018914-19027510[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 6.4e-06 0.00095 20.3 1.0 1 23 218 240 218 240 0.98 2 30 0.0028 0.41 12.0 1.9 1 23 263 286 263 286 0.96 3 30 0.00023 0.035 15.4 1.0 2 23 293 315 292 315 0.96 4 30 0.00023 0.034 15.4 0.5 1 21 335 355 335 356 0.95 5 30 0.0096 1.4 10.3 0.1 3 23 453 473 451 473 0.93 6 30 0.088 13 7.3 0.1 1 23 479 502 479 502 0.86 7 30 0.00012 0.018 16.3 0.1 1 23 565 588 565 588 0.96 8 30 0.0074 1.1 10.7 0.5 1 23 594 617 594 617 0.96 9 30 0.15 23 6.6 1.9 1 23 630 652 630 652 0.97 10 30 3.6e-05 0.0054 17.9 1.0 3 23 693 714 691 714 0.95 11 30 0.082 12 7.4 1.1 2 23 772 795 771 795 0.93 12 30 3.2 4.7e+02 2.4 0.0 2 23 804 826 804 826 0.84 13 30 0.61 91 4.6 0.0 2 23 833 855 832 855 0.91 14 30 1.3e-05 0.002 19.3 1.2 1 23 863 885 863 885 0.98 15 30 0.21 31 6.1 0.4 3 23 917 939 915 939 0.84 16 30 0.00022 0.032 15.5 3.3 1 23 942 965 942 965 0.97 17 30 0.0026 0.39 12.1 0.2 2 23 972 994 971 994 0.95 18 30 0.0033 0.49 11.8 5.1 1 21 1020 1040 1020 1041 0.95 19 30 0.0028 0.41 12.0 1.8 2 23 1055 1076 1054 1077 0.93 20 30 0.22 32 6.1 0.9 1 23 1080 1103 1080 1103 0.94 21 30 0.004 0.59 11.5 2.0 2 23 1110 1131 1109 1131 0.95 22 30 0.99 1.5e+02 4.0 0.2 2 23 1139 1161 1139 1161 0.95 23 30 3.7 5.5e+02 2.2 0.0 2 23 1168 1190 1167 1190 0.87 24 30 0.23 34 6.0 2.7 2 23 1199 1221 1199 1221 0.96 25 30 1.3 2e+02 3.6 0.9 2 23 1227 1249 1227 1249 0.92 26 30 0.07 10 7.6 0.2 1 23 1306 1329 1306 1329 0.95 27 30 0.00034 0.05 14.9 1.1 1 22 1354 1375 1354 1375 0.95 28 30 0.51 76 4.9 1.3 2 23 1474 1496 1473 1496 0.94 29 30 0.15 23 6.5 1.2 2 23 1503 1525 1502 1525 0.94 30 30 0.71 1.1e+02 4.4 2.5 1 23 1536 1558 1536 1558 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCGAGGGAACGTTACGACGAATTGTGCAGGCTGTGTGCCTCATATGATGCTgttaaaatggatatattcgGTAAGGAAGGAAAGAATCGTCAACTAGTCGACAAAATCCAGACGTGTCTTCCCTTCAAGATTGCTGAGGATGATCGACTACCAAAGTGTTTGTGCTACAGATGTATGTacaatcttgaaaatttttacgaCTTCAGAACTGCCTGTGTTAATGCTGTTGCATTATTGGAACGATCACTACCACCTACTGAATCCAAAAATGGTCAAGTTCAAAACGACATGGAAAAACATTCAGAATTACGTTCTGAGCTGCTtaaggaaaaggaaaaaatgccaattttaATACCAGAAGCTCCAATTGTTAATCCAAATGCTGCATTGGGCACTCCTCCACGATTGAACTCGGATGGTGAGGCAGAACCAGAAATTGAGGAAGTTATGGACCAGAGTGAAACAGAGGAGGGAATGGAAGACACAGAGGACAGAAAATCTGACGAATACGAGATGGACATGGAGACAAATCCCAGTGATTTCTTGGAAATGCCTCCCATGGTGACAGATGATTTGGAAGAACCACAgaatcataatttcaattcaactgCTGTCTTTCAGCACACATCAGAACAGCACGAGGTTTATGTTTGTTCTCTATGCAATAAGGCATTCAGCTCCAAGGGTCACCTGTCACTCCATGCACGTATACACGTGGGTGCTGGAGATGTAATCGGCTCGAAAGTAATCACTGATGACCACACATCGTATAAACGTCCATATCAGTGTGATTTGTGCAACAAATCTTACTCAACAGCTAAACACAGGTGGGGACATGTATCAACGACACATCGAGGACATCCAGCTGTAACATGCAGATACTGTTCgagaatttattcaacaaGAACTAACCTTGAGGAGCACATAAAATCTAGACACACTGGTTTACCACCACCACCAGAATTACCAGTACCCTATGTACAACAGGACACTAGATATCAGTGTAAAACATGTCCAAAAATGTATACTAATGTCACTGATCTCAACAAACACAGCAGAATTTGTGTGGGTGAACGTCAGAGAGAATTAACGAGTCGTCCACCTCCAGTTCAACCAAAGGGAAGAAGTCTCATGGATACTTCGGATATGTCGAGCTTGGAATCAGACGAGGAAAATCGAGAATACAGAAATGCTGAAGccaaattatccaaaaatccACAGTTAACAATTCTGAAACAAGCACTAACCAGAACAGACGGTTTAAAACgagataatgagaaaaattctcattacaAAACTTTAAAGACTATTAAAACTGAGAATGAACAggaaagcacaaaaaaatggtTCTGTGAATTCTGTCCACAGAGTTTTACTTCAGTTGATGCTCTGAAAGAGCACGAAGTGGTCCATGAATCTGATAAACCATACATTTGTATTCTTTGTGAGAAAGATTTTGTCTTGAAATCATCACTGAGTCGTCACATTGTTGCTTCACATGGCGTTGATCCTGTACCCATAATCGACAGTGatacttgtttaaaaaaaaatattctccaaaaaacgAGAATTGACGAATTGAAACGTGAACCACCGCCATCACCATTTTCACCAGACAGACATTTAGATAATGAGGAGGATGATCCAGAGAGTAGAGATGATAATATGATTGAAATTGAGACTGTATTTGTTTGTGAAATATGCACGAGAGATTTTAACGATCGTGCCTCACTCTGGTTGCATATAAGAGCAACGCACAAAGAATTTGCTGCATTTGCCTGTGGTGTTTGCTTGAAAATATGCTCTGATAATGAACAATTGTTGAATCACGTTAATATGTATCATGGTGGCTCAAAGCTTTTAGTATCAGAACAAAGAAGATACAGTTGTACGATATGTGGGCGTCAGCAtgattccagaaaaaaattaatgacacaCGTTTCAATACACAATATTGATTCTAGCTATGATCCAGCGAATTTTGTCCAATTAAACAGTAATTATTACAACGAAAATCTAAATACAGAGCAGGATGGTGATTTTGATGCTGAGGATGGGGACAAAGTGAATTGTTATGTCTGCAGAAAATCATTTCCCAATGAGGATCATCTCATACGTCATCAGAGAAATGCACACAAAACCGATCAATTATTGGGTGAGCCATCAGCAAATGGTGGAGTTAATCCAAATGGTAATAAAGCACAGTAtcatctattttttgtttGTGAACTCTGTGGCAGTTCTCATCCATCTAAATGGGAGAGATGGCTACATGTTAGCAGTATCCATGGAGATGAACCAACAATAAGATGTGAACGTCCAGATTGTGCCAAGATATTTTCCACaaagtcattaaaaaatgaacatgTACAGCATCACATGCTGCAGGGATCATCGCCAAATACATGTGAAATATGTGGTAAATTATGGGGCAGTAGGGTTGATTATTGGAAACACGTGATGGGTGTACATGCTGATACAGTGCCATTAATTTGTGGTGTATGCTTGAAGGTATTTCCAGATGTTATGCAACTCAGTGGCCATGTAAAGGCCAATCATTGGCCATTAACTAATGGTGATTTTAGTTGTGATATTTGTGGACGTCCTTACtcgaataaatcgaaaatGTCGAgacatcgaaaaattcatggattgGATCTTGATGGATTTAATAATGGAGTCAATGAAACAATAAATGATTCTATGAATTTAGAACAGAGTCCACCAGAAGTTGATCTCACTTGTGAAATGTGTGCTgatgttaatttttcatcatggGAGGATCTCTGTAATCATCGTAGGCTCATTCATGCTCTATTCCCATGTGATTTATGTAATAAATGTTATGGTAGAACTTCACATCTTTGGAAGCATGTTAACCGAGTTCACAAGGGTCACAAAGACGTGACTTGTCCCTACTGCATGAAGACAAGTGCTTCCAAGGATCATTTAGCAGCGCACATTGCTAAAATTCATCGTTACGAACCAGAAACGAAGCAGAGCAAGGAGACAACAAATTATCCATCACCAAGTGCTGAGGAGGAAACTATTCATCATTgcgaaaaatgtaataaaggCTTCCACAAACGTTATTTACTCAGACGTCATATGAAAGGCTGCCAGAATTATCGTAAAGATCCTGGTGCACTATTAACACGCTGCAGAGCATGTGAAAGAATATTTAAAGATCGTGCAAGTCTACAAAAACATATCGAGAATCATCACAGCAGTTACACTTGTCATTTATGTGATGAAACGATCACGTCTAAACTTGGTATAATGACACACAATAGAGTCAATCACATGCATCATCCAGATTTAACATGCAGCAGTTGTAAGAAGCTTTTTAGAACTAAAGAGGATTTAGAATCACACAAAAAAGATCATAAATATCATAATTCACCGAATGTCTGTGATTTTTGTGGTGATACAGttgagaataaattaaaattaaaaatgcacatTTTATCACTTCACAGAAATGAAATTGGTGTTTCATGTGGTGTTTGCTTGATTCCAATGAAGGATCCCAAGGATCTAAAAAAACACGTTGAAGATGTACATGCTGGAATACTTCTCAAGCCTAATACTTGTCAAGTTTGTGGTAAACAGTATGCATCAAAGTGGAAAGCCTTTGATCACACGAAAAAGTGTCATGGAAAAGTATTTAGAACTTGCAAACAATGTTTAGCAGTATTTACGACTGATTCAGATATTAGATATCACTATGAGCATATACACAATGTTCCAAAGGATCAATTAGCTGGCTTTGAGAATCACGTTGAATTAGCAAGTAAAACAGATGAGCCTGTAGCTGTTAAAGAGGAACCTGAGGATTTAGAGTACGAGGATGGTGTATACGATGATAATCCACATGTTCCCGAATCAAAACGCAAAAGATCCGACACATTTGATTGTGAAATATGTCcagaaatattcttaaatcaGCAAACATTATCAGAGCACTACAAAAATGTTCACAATAAAGATCCCGaaagaatgttcaaaaaaattaaaactggCACAAAAAAACGCATGAGAGcacgtgaaaattttgaatgtaaAAATTGCACCAAACAATTTAGTACAAAGACACTATTCTGGAATCACATAGAAACATGTAAACGAAGAAGTTCAAAGGATGAAACAAGACCGAGTTATTCAACATCAATTTTAGAGTCTCACTTGAAGAATAATAATCAGATTAAAAAAGAGCCAGTTGATACGTCTACTAATGAAACTAATCTTAATATACcagattttaatttatttgaagataTTAATCTTCAATTATCTGGACAGAAAGCAATACCAAATTTAATGCCACTGTCTCAGgtaaaaattacacaaaacaTGAGATGTTACAGAAAAGATTCGCGAAAAGTTTATGATGAATCAACGAATACTGTTTGTGCCTGTGAAGTTTGTGGCAAACAGTGGCCAGCTAAAAAACATCTTTGGCAGCATTTGATACGTTTTCATCGTGCTGAAGCTGCTGTTACTTGTGGAGTCTGTTTAAAACTCTGTACAACGTACAAAAATCTTTTACAACACTTGAAAGATGCGCATGAAGCTATTTTATCATGTGAAGGAAATAATTTTACTTGTAAAACGTGTGGAAGATATCACAATGCTAGGAGTAAACTTCTTCTTCATATGAGTATTCACATAAATAATGAGCATATCTGGTGTGAGAAGTGTGCAGTCAGTTTTGATTGCCAAGAGAAATTAGACCAGCATTCTAATAATTGTATGGTCAAGCGGAAAGAAGCAGAATCCGAGGAGCATGGCGACGAAATGGATGAGGAGATGATAAAGCACGAAAATGAGGAGGACAAGGGCAGTTTGATTGGTGATGGTGCATCACTGATGGAAGAAGTCGAGGAGGATGCTGATTTTGATTCTGAACCAGATGCCAGTGAAAATGGCGATAATTCGGGTCAATCTGAAGAATCTGGTGGTAGCAGTGATTCTGGTACCGAAggtgaaaatgaagagaatgaaGTAGAGTCAAGGGCTAATAGTCGAGTCACTGGTGATGTTGGCTGTCCCACTGACACCGAGGAGAGAGACTCGGACACACCTGAACCCACTCCCGAAGTGCGAGAAAAGTCTCCAAAACCCGGTGAACCTAAATCCAGTCATTCCAACGAAGAGATTGAGCATAATGACGTTGAAGAAAAGGCAAAATCCGATGATGAGCAGGATAATGTTAAGGAAGCTAATGAGAGCAAGTCAGAGATTGGGGAAAAGTCGCAGGATGATTCTGACGACGAGGGACCTCCCATTTTGAGTCCCATGATGCCATTGCCTGCAGAGAACGAGTCTCAGGAGCCTCCTGCCTCTCCTGAGGGTCATCATGAAGATGAAAGCAGTCAACAAGGTTCACCGAGCATCAAAGAAGAAgccgaagaagaagaagaagaagaggaggacGAAATTCCTGAACTCGATGGAATGGAGAATCCTGAAAAAGAAGCTCCATCACCGAACTCAAATGTCGTTGATTATGAGGAATACTCTTCTACAGCCAAATCAGCAAGTGCTGCAGCATCTGCCGAGGAAATTGAGTCTGGTGATGATATTTATGACGACGACAGTAGATTGCAGATTGATCAATCAGCTGATGGCAACTCGAAGGGCTCTGAAGAGAGCGAGAGTATCAGGGAGAATGATCAGGGAGAAGATGAAGAGATGTTTGTAGATGAAGACGGTGAAATTGAAGAAGCTGAGGAGGAGGAAGAGAGTAATGAAGTACAGATTGAGGGCTTGGACGGTACTGTACTCATGGTTGCTAATGATGCTGATGGTAATCAGATATTAATACAACGAAATGTCTCGGAAATGAGCAATGATTCAATGGGTGAAGTTGCTGGTTTTATCTATCACGAAgaggaaaatggaaatgaagatGAAGAGCAGGAAGAAGCtgaagaggaggaggatgATGCTGAACAGGCTGAAGAGGGAGAGGAAATCGAGGAGGCTTACAGTAATGAAGTTGTAAATGAAGCAGAGGAAGAAGAGGAAATGGAAATAGATGAAGCTGAAAAGACTGGTGAAGAAGGTGAAGATACAGATGATAATTTGAGTGCCAAAAACAATGTGTCAAGGACGACGTTCCAGTGA
- Protein Sequence
- MESRERYDELCRLCASYDAVKMDIFGKEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERSLPPTESKNGQVQNDMEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEAEPEIEEVMDQSETEEGMEDTEDRKSDEYEMDMETNPSDFLEMPPMVTDDLEEPQNHNFNSTAVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGSKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVPYVQQDTRYQCKTCPKMYTNVTDLNKHSRICVGERQRELTSRPPPVQPKGRSLMDTSDMSSLESDEENREYRNAEAKLSKNPQLTILKQALTRTDGLKRDNEKNSHYKTLKTIKTENEQESTKKWFCEFCPQSFTSVDALKEHEVVHESDKPYICILCEKDFVLKSSLSRHIVASHGVDPVPIIDSDTCLKKNILQKTRIDELKREPPPSPFSPDRHLDNEEDDPESRDDNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNIDSSYDPANFVQLNSNYYNENLNTEQDGDFDAEDGDKVNCYVCRKSFPNEDHLIRHQRNAHKTDQLLGEPSANGGVNPNGNKAQYHLFFVCELCGSSHPSKWERWLHVSSIHGDEPTIRCERPDCAKIFSTKSLKNEHVQHHMLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVMQLSGHVKANHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDLDGFNNGVNETINDSMNLEQSPPEVDLTCEMCADVNFSSWEDLCNHRRLIHALFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCPYCMKTSASKDHLAAHIAKIHRYEPETKQSKETTNYPSPSAEEETIHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCDETITSKLGIMTHNRVNHMHHPDLTCSSCKKLFRTKEDLESHKKDHKYHNSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHAGILLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRYHYEHIHNVPKDQLAGFENHVELASKTDEPVAVKEEPEDLEYEDGVYDDNPHVPESKRKRSDTFDCEICPEIFLNQQTLSEHYKNVHNKDPERMFKKIKTGTKKRMRARENFECKNCTKQFSTKTLFWNHIETCKRRSSKDETRPSYSTSILESHLKNNNQIKKEPVDTSTNETNLNIPDFNLFEDINLQLSGQKAIPNLMPLSQVKITQNMRCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYKNLLQHLKDAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNEHIWCEKCAVSFDCQEKLDQHSNNCMVKRKEAESEEHGDEMDEEMIKHENEEDKGSLIGDGASLMEEVEEDADFDSEPDASENGDNSGQSEESGGSSDSGTEGENEENEVESRANSRVTGDVGCPTDTEERDSDTPEPTPEVREKSPKPGEPKSSHSNEEIEHNDVEEKAKSDDEQDNVKEANESKSEIGEKSQDDSDDEGPPILSPMMPLPAENESQEPPASPEGHHEDESSQQGSPSIKEEAEEEEEEEEDEIPELDGMENPEKEAPSPNSNVVDYEEYSSTAKSASAAASAEEIESGDDIYDDDSRLQIDQSADGNSKGSEESESIRENDQGEDEEMFVDEDGEIEEAEEEEESNEVQIEGLDGTVLMVANDADGNQILIQRNVSEMSNDSMGEVAGFIYHEEENGNEDEEQEEAEEEEDDAEQAEEGEEIEEAYSNEVVNEAEEEEEMEIDEAEKTGEEGEDTDDNLSAKNNVSRTTFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00438255;
- 90% Identity
- iTF_00048133;
- 80% Identity
- -