Basic Information

Insect: Psyttalia concolor
Gene Symbol: -
Assembly: GCA_030522845.1
Location: JAPYZM010000263.1:11809-22368[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 6.6e-06 0.0011 20.3 1.0 1 23 219 241 219 241 0.98

2 31 0.0029 0.48 12.0 1.9 1 23 264 287 264 287 0.96

3 31 0.00024 0.04 15.4 1.0 2 23 294 316 293 316 0.96

4 31 0.00023 0.038 15.5 0.5 1 21 336 356 336 357 0.95

5 31 0.006 1 11.0 0.2 2 23 447 468 446 468 0.96

6 31 0.09 15 7.3 0.1 1 23 474 497 474 497 0.86

7 31 0.00012 0.021 16.3 0.1 1 23 560 583 560 583 0.96

8 31 0.011 1.8 10.2 0.4 1 23 589 612 589 612 0.96

9 31 0.16 26 6.6 1.9 1 23 625 647 625 647 0.97

10 31 3.8e-05 0.0063 17.9 1.0 3 23 688 709 686 709 0.95

11 31 0.1 17 7.1 0.8 2 23 766 789 765 789 0.93

12 31 3.3 5.5e+02 2.4 0.0 2 23 798 820 798 820 0.84

13 31 0.011 1.8 10.2 0.1 2 23 827 849 826 849 0.95

14 31 1.4e-05 0.0023 19.3 1.2 1 23 857 879 857 879 0.98

15 31 0.16 26 6.5 0.3 3 23 911 933 909 933 0.86

16 31 0.00022 0.037 15.5 3.3 1 23 936 959 936 959 0.97

17 31 0.0027 0.45 12.1 0.2 2 23 966 988 965 988 0.95

18 31 0.0034 0.57 11.8 5.1 1 21 1014 1034 1014 1035 0.95

19 31 0.0028 0.48 12.0 1.8 2 23 1049 1070 1048 1071 0.93

20 31 0.23 39 6.0 0.9 1 23 1074 1097 1074 1097 0.94

21 31 0.089 15 7.3 4.2 2 23 1104 1125 1103 1125 0.95

22 31 1 1.7e+02 4.0 0.2 2 23 1133 1155 1133 1155 0.95

23 31 3.8 6.4e+02 2.2 0.0 2 23 1162 1184 1161 1184 0.87

24 31 0.24 40 6.0 2.7 2 23 1193 1215 1193 1215 0.96

25 31 0.99 1.7e+02 4.0 2.5 2 23 1221 1243 1221 1243 0.93

26 31 0.72 1.2e+02 4.5 0.1 1 23 1298 1321 1298 1321 0.93

27 31 0.00064 0.11 14.1 1.0 1 21 1346 1366 1346 1367 0.94

28 31 0.3 50 5.7 1.3 2 23 1465 1487 1464 1487 0.94

29 31 1.7 2.9e+02 3.3 0.7 2 23 1494 1516 1493 1516 0.94

30 31 0.73 1.2e+02 4.4 2.5 1 23 1527 1549 1527 1549 0.97

31 31 0.66 1.1e+02 4.6 0.3 3 19 1558 1574 1558 1577 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	6.6e-06	0.0011	20.3	1.0	1	23	219	241	219	241	0.98
2	31	0.0029	0.48	12.0	1.9	1	23	264	287	264	287	0.96
3	31	0.00024	0.04	15.4	1.0	2	23	294	316	293	316	0.96
4	31	0.00023	0.038	15.5	0.5	1	21	336	356	336	357	0.95
5	31	0.006	1	11.0	0.2	2	23	447	468	446	468	0.96
6	31	0.09	15	7.3	0.1	1	23	474	497	474	497	0.86
7	31	0.00012	0.021	16.3	0.1	1	23	560	583	560	583	0.96
8	31	0.011	1.8	10.2	0.4	1	23	589	612	589	612	0.96
9	31	0.16	26	6.6	1.9	1	23	625	647	625	647	0.97
10	31	3.8e-05	0.0063	17.9	1.0	3	23	688	709	686	709	0.95
11	31	0.1	17	7.1	0.8	2	23	766	789	765	789	0.93
12	31	3.3	5.5e+02	2.4	0.0	2	23	798	820	798	820	0.84
13	31	0.011	1.8	10.2	0.1	2	23	827	849	826	849	0.95
14	31	1.4e-05	0.0023	19.3	1.2	1	23	857	879	857	879	0.98
15	31	0.16	26	6.5	0.3	3	23	911	933	909	933	0.86
16	31	0.00022	0.037	15.5	3.3	1	23	936	959	936	959	0.97
17	31	0.0027	0.45	12.1	0.2	2	23	966	988	965	988	0.95
18	31	0.0034	0.57	11.8	5.1	1	21	1014	1034	1014	1035	0.95
19	31	0.0028	0.48	12.0	1.8	2	23	1049	1070	1048	1071	0.93
20	31	0.23	39	6.0	0.9	1	23	1074	1097	1074	1097	0.94
21	31	0.089	15	7.3	4.2	2	23	1104	1125	1103	1125	0.95
22	31	1	1.7e+02	4.0	0.2	2	23	1133	1155	1133	1155	0.95
23	31	3.8	6.4e+02	2.2	0.0	2	23	1162	1184	1161	1184	0.87
24	31	0.24	40	6.0	2.7	2	23	1193	1215	1193	1215	0.96
25	31	0.99	1.7e+02	4.0	2.5	2	23	1221	1243	1221	1243	0.93
26	31	0.72	1.2e+02	4.5	0.1	1	23	1298	1321	1298	1321	0.93
27	31	0.00064	0.11	14.1	1.0	1	21	1346	1366	1346	1367	0.94
28	31	0.3	50	5.7	1.3	2	23	1465	1487	1464	1487	0.94
29	31	1.7	2.9e+02	3.3	0.7	2	23	1494	1516	1493	1516	0.94
30	31	0.73	1.2e+02	4.4	2.5	1	23	1527	1549	1527	1549	0.97
31	31	0.66	1.1e+02	4.6	0.3	3	19	1558	1574	1558	1577	0.94

Sequence Information

Coding Sequence: ATGGAGTCGAGGGAACGTTACGACGAATTGTGCAGGCTGTGTGCCTCCTACGATGCTGTTAAAATGGATATATTCGGACAGGAGGGCAAGAATCGTCAACTAGTCGACAAGATCCAGACGTGTCTTCCCTTCAAGATCGCCGAGGATGATCGACTGCCAAAGTGTTTGTGCTACAGATGTATGTACAATCTCGAGAATTTCTATGACTTCAGAACAGCCTGCGTTAATGCGGTGGCTGTATTGGAGAGATCTCTACCAGCGAGCGAATCGAAAAATGGCGAGACCGAAAACGACACAGAGAAGCACTCCGAATTGCGTTCGGAGTTACTCAAAGAGAAGGAGAAAATGCCAATTTTGATCCCAGAGGCGCCAATTGTCAATCCAAATGCAGCCCTGGGCACTCCACCTCGATTAAACTCGGATGGCGAGGCAGATCACGAGATTGAAGAAGTGATGGATCAAAGTGGAACAGACGAAGGTATGGACGACGCAGATGACCGTAAATCCGACGAATACGAGATGGACATGGAGACAAATCCAAGTGACTTTCTGGAGATGCCTCCGATGGTGACGGATGACGCTGAGGAGTCCCACCAAAATCACCACATAACGACTCCACCCCCTTTCCAGCACACGTCCGAGCAGCACGAGGTATATGTGTGCTCGCTCTGCAACAAAGCATTCAGCTCCAAGGGACACCTGTCCCTCCACGCTCGAATTCACGTGGGAGCTGGCGACGTAATAGGCGAGAAAGTCATCACCGACGATCACACATCATACAAACGGCCGTACCAATGTGATTTGTGCAACAAATCTTACTCAACAGCCAAACACAGGTGGGGACACGTGTCGACAACTCATCGAGGTCATCCAGCAGTCACCTGCAGATACTGTTCACGAATATATTCAACAAGAACAAATCTCGAGGAGCACATTAAATCTAGGCACACTGGTCTCCCTCCACCTCCGGAGATGCCCGTGCCCTATGTCCAACAGGACACCAGGTACCAATGCAAAACCTGTCCAAAAATGTACACAAATGTCACAGATTTGAACAAACACAGCAGAGTGTGCCTAGGTGATCGTCAGAATGAGTCTAATCGTGTCCCCAGTCAGCCCAAGGGTAGATGTCTGATGGACACATCAGACATGTCGAGTTTAGAATCCGACGAGGAGAACAAGGAGTATCGAAATGCTGAGGCTAAACTCTCGAAAAATCCCCAGTTAACAATTCTCAAGCAAGCATTGACCAGAACCGATGGACTTAAACGAGAAGAAAAACCCTATAAAGCACtgaaatcgataaaaaatggTAGCGAACAGGAGGTGAAAAAGTGGTACTGTGAGTTTTGTCCTCAAAATTTTACATCAGTCGATGCACTGAAAGATCACGAAACAACTCACGACTCTGATAAACCCTACATATGTATTTTATGTGAAAAAGATTTTGTCTTAAAGTCGTCTCTCAGTCGTCACATCGTCGCGTCTCATGGAGTTGATCCAGTGCCAATAACCGACAGTGATACTTGTCTAAAGAAAAATGCACTAGCTAAATCAAGGATTGAGGAGTTGAAACGTGAGCCGCCCGCCTCGCCATTCTCACCAGAGCCAAGACTAGGCAATGATGAGGACGATCATGAGAGTAGAGACGACAATATGATTGAAATTGAGACTGTATTTGTCTGTGAAATATGCACGAGGGACTTTAACGATCGTGCATCACTATGGCTACACATTCGAGCGACGCACAAGGAATTTGCCGCATTTGCATGTGGTGTTTGTTTGAAAATATGCTCGGATAATGAGCAATTGTTGAGTCACGTTAATATGTATCATGGTGGATCTAAGCTACTTGTGTCCGAGCAGAGGAGGTACAGTTGTACGATATGTGGACGTCAGCATGATTCGAGAAAGAAACTCATGACCCACGTGTCTATTCACAATATTGATCCCACTTATGACCCAGCGGGTTTCGTTCAACTCAACAGTAATTACTACAACGAGAGTTTGAATAACGAGCAGGAGGGGGACTTTGACGCTGAGGACGGGGAGAAGGTCAACTGCTACGTTTGCCGAAAATCATTTCCCAATGAAGATCACTTGATTCGACACCAGAGAAATGCCCACAAGAGCGATCCGAGTGGCGAGCTCTCGGCAAATGGTGGAATAAATCCCAATGGTAACAAGGCCCAGTATCACTTGTTCTTCGTCTGCGAGCTATGCAATAGCTCTCATCCATCCAAGTGGGAGCGATGGCTGCACGTGAGCAGTGCTCATGGTGAGGAGACCTCCATCAGGTGTGAGAGGCCAGATTGCGCTAAAATATTTGCCacaaaatcactcaaaaatgAGCATCTCCAACATCATTTGATGCAGGGCTCATCGCCCAATACATGTGAAATATGTGGAAAACTCTGGGGTAGTAGAGTTGACTACTGGAAGCACGTTATGGGAGTCCATGCTGACACTGTACCCCTCATCTGTGGAGTTTGTTTGAAGGTATTCTCCGATGTTGTCCAACTCAGCAGTCACGTCAAGTCCAATCACTGGCCGCTGACTAATGGTGACTTCAGTTGTGATATTTGTGGTCGTCCTTATTCCAATAAATCCAAGATGTCGAGGCACAGGAAGATACACGGAATTGATAACGACGGGGTTAACAATGGCATCAACGAATCGATGAACGACACTATTAATTCGGAACACAGTCCCCTTGAGGCCGATCTCAGCTGCGAGATGTGCGCTGATTTGAGTTTTGCATCGTGGGAGGATTTATGCAATCATCGTAGATTGATTCATGCACTATTCCCTTGTGACTTGTGTAATAAATGTTATGGGAGGACTTCGCACCTTTGGAAACACGTGAATAGAGTTCACAAGGGGCACAAAGACGTCACTTGTCCTTATTGCATGAAAACCAGTGCTTCCAAGGATCATTTAGCAGCGCACATTGCTAAGATTCATCGTTATGAGCCTGAAACTAAGGAGAACAAGGAGTCAGGGAGTTATCCATCACCAAGTGCTGAAGAGGATATCATTCATCACTGCGAGAAATGTAATAAAGGCTTCCACAAGAGGTATCTTTTACGACGTCACATGAAAGGCTGTCAAAATTATCGTAAAGATCCTGGGGCATTGTTAACACGATGCCGAGCATGCGAGAGAATATTCAAGGATCGTGCAAGCTTACAAAAACATATCGAGAATCATCATAGTAGTTATACGTGTCACTTGTGTGACGAAACAATAACATCGAAATTGGGAATTATGACTCACAATAGGATCAATCATATGAATCATCCTGATTTAACTTGTTGCAGTTGTAAGAAGCTTTTTAGAACTCGAGAGGATCTCGAGTCGCATAAGAAGGACCACAAGTATCACAATTCACCGAATGTCTGCGATTTCTGTGGGGACacagttgaaaataaattaaaattgaaaatgcacATTTTGTCACTTCACAGGAATGAAATTGGAGTTTCTTGTGGTGTTTGTTTGATTCCAATGAAGGACCCCAAGGATTTGAAGAAGCATGTGGAGGACGTTCATGGTAGTATCCTTCTGAAGCCCAATACCTGTCAGGTCTGTGGAAAACAGTATGCATCCAAGTGGAAGGCCTTTGATCACACTAAGAAATGTCATGGAAAGGTATTCAGAACGTGCAAACAATGTCTGGCAGTATTCACCACGGATTCTGATATTAAACATCACTATGAGCATGTTCACAATGTCCCGAAGGATCAATTATCAGGCTTTGAGAATCATGTGGACACACCTACCAAACCAGAGGATCCAGTTACTATCAAGGATGAGCCTGAAGACGTTGATGACGAGGATAACTATGATGAGGGGCCTCAGCTATTAGAAAAACGTAAACGATCAGATACATATGACTGTGAAATCTGTCCGGAGATATTTCTCAACGATAACACATTGTCGGAGCATTACAAAAATGTTCACAACAAGGATCCTGAGAGAATGTTCAAGAAGATGAAGACAAGCACAAAGAAGAGGATGAGAGCTCGAGAGAATTTCGAGTGTAAAAATTGCACCAAACAATTCAGTACAAAAACACTATACTGGAATCACATTGACACTTGCACTAGGAGGAGTTCGAAGGATGATTCTAGGCCGGGTTCCACATCGATCCTGGAGACTCATCtgaagaataataatcaaattaaGAAGGAGCCACAGGATGCGACAATGAATGAGTCAAATCTCAACATCCCCGACTTCAATTTATTCGAGGATATAAACCTCCAGTTATCAGCCCAGAAACCAATTCCAAATCTGATGCCCCTGTCCCAAGTGAAAATGGCCCAGAGTTTGAAGTGTTACAGAAAGGATTCGAGAAAGGTCTACGATGAGTCGACGAATACAGCTTGTGTCTGTGAGGTTTGTGGCAAACAGTGGCCAGCGAAAAAACATCTGTGGCAACATTTGATAAGATTTCATCGAGCCGAGGCTGCTGTTACCTGCGGCGTCTGCTTGAAACTCTGCGACACCTACAAAACCCTCGCTCAACACCTGAAGGACGCCCACGAGGCCATTCTCACCTGCGAGGGAAACAACTTCACCTGCAAGACTTGCGGCCGATATCACAATGCCAGGAGTAAACTGTTGTTACATATGAGCATTCATATCAATAATGATGAGCACGTGTGGTGCTCAAAGTGTGCCACGAGCTTTGAGACCCAGGAGAAATTGGATCAACATGCTGATAAGTGTCTTGTCAAGAGGAGAGAAGCTGAATCCGAGGATCACAGTATTGATAACGACGAGGACATGATAAAGCATGAGAATGAAGAAGATAAGGGGAGTTTGATTGGTGATGGGGCGTCACTCATGGAAGAGGTGGAGGAGGATGTTGATTTTGATTCTGAACAGGAGGGAAGTGATAATGGGGAGAACTCGGAGCATTTTGAGGACTCTGAGAGGAGTAGTGGGTCTGGAAGTGAGGAGGAGAACGACGAGCAGGAGGAGAGCGTGTTGAGGGCGAATCGCGGTGTCGCGGGGGATGTTAGTGAGTCTGAGGAGGACGAGGTGGACGAGGTGGACGAGGAGGACGAGGAGGACGAGGAGGATGGAGATTCAGACACCCATGAACCAGTTTCTGAAGTACCTGAAGAGGGAGATTTATCTATGAGAGATAATGAATCAAGTGCTGAGGGTGTACCTGAGAAAAGTGAACGGAGGGAGGAGGAGAATGCTTCAAAAGCTTTGAAAGCAGGTAAAGGTGTCAAGGTGAAGACTGAGGGCAAGTCGACGGAGGACTCTGACGATGAGGGGCCACCGATATTGAGCCCAATGATACCACTGCCACAGGGTAAGAGAGAAAAACTCATGGAGGATCCTGGGGAGGAGAACTTGATGAAGATGAGTCGGCAGGGGTCTCCGAGTGGCAAGGGGGACGCCGAGGAAGATGAGATTCCTGAGTTGGATGGAATTGAGAGTGCTGAGAAGGAGGCTTTGTCTCCACGGTCTAATGGTGATTATGATGAGTACTCTTCCACTGTTAAATCAGGGAGTGCAGTGGCATCTGCTGAGGAGGATTCTAACGAGGAGATAGACGATGATGACAGTCGATTGCAGATCGATCAGGCTGGGGAGTCTAATTCCCAGGAGTCTCAGGGGGATGAGGAGGAAGAGGGCATGACAGGGATAGGTGAAGAGGCTGAAGGGGATGACGAGGAGGAGGGAGGTGAGGTCCAAGTGGAAGGACTCGATGGAACTGTTCTCATGGTCGCCAATGATGTTGACGGCAATGAAATATTGATTAGACGGAGTGTCTCGGAAATGGGGGACGATGAGGATGATGAATCCATGGGGGAAGTGGCTGGGCTTATTTATCAGGAAGACAATGGTAATGATAATGAAGATGAGAATGCTTATGACAATGAGAATGAGAATCAAGTCCAGGAGAATGATAATGGAGATGAGGATGAGGAGGAGGGCTACAGTAACGAATTTGATCATGATGTTGCGGAGGAAATGGAGGAGGAGATGGAGGTGGAGGAGGGTGACAAGACTGGTGAGGAGGAGGACGACACTGATGACAATTCAAGTGCCAAAAACAATGTGTCAAGGACGTAG
Protein Sequence: MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVAVLERSLPASESKNGETENDTEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEEVMDQSGTDEGMDDADDRKSDEYEMDMETNPSDFLEMPPMVTDDAEESHQNHHITTPPPFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHTGLPPPPEMPVPYVQQDTRYQCKTCPKMYTNVTDLNKHSRVCLGDRQNESNRVPSQPKGRCLMDTSDMSSLESDEENKEYRNAEAKLSKNPQLTILKQALTRTDGLKREEKPYKALKSIKNGSEQEVKKWYCEFCPQNFTSVDALKDHETTHDSDKPYICILCEKDFVLKSSLSRHIVASHGVDPVPITDSDTCLKKNALAKSRIEELKREPPASPFSPEPRLGNDEDDHESRDDNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLSHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPTYDPAGFVQLNSNYYNESLNNEQEGDFDAEDGEKVNCYVCRKSFPNEDHLIRHQRNAHKSDPSGELSANGGINPNGNKAQYHLFFVCELCNSSHPSKWERWLHVSSAHGEETSIRCERPDCAKIFATKSLKNEHLQHHLMQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFSDVVQLSSHVKSNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGIDNDGVNNGINESMNDTINSEHSPLEADLSCEMCADLSFASWEDLCNHRRLIHALFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCPYCMKTSASKDHLAAHIAKIHRYEPETKENKESGSYPSPSAEEDIIHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCDETITSKLGIMTHNRINHMNHPDLTCCSCKKLFRTREDLESHKKDHKYHNSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHGSILLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIKHHYEHVHNVPKDQLSGFENHVDTPTKPEDPVTIKDEPEDVDDEDNYDEGPQLLEKRKRSDTYDCEICPEIFLNDNTLSEHYKNVHNKDPERMFKKMKTSTKKRMRARENFECKNCTKQFSTKTLYWNHIDTCTRRSSKDDSRPGSTSILETHLKNNNQIKKEPQDATMNESNLNIPDFNLFEDINLQLSAQKPIPNLMPLSQVKMAQSLKCYRKDSRKVYDESTNTACVCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCDTYKTLAQHLKDAHEAILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINNDEHVWCSKCATSFETQEKLDQHADKCLVKRREAESEDHSIDNDEDMIKHENEEDKGSLIGDGASLMEEVEEDVDFDSEQEGSDNGENSEHFEDSERSSGSGSEEENDEQEESVLRANRGVAGDVSESEEDEVDEVDEEDEEDEEDGDSDTHEPVSEVPEEGDLSMRDNESSAEGVPEKSERREEENASKALKAGKGVKVKTEGKSTEDSDDEGPPILSPMIPLPQGKREKLMEDPGEENLMKMSRQGSPSGKGDAEEDEIPELDGIESAEKEALSPRSNGDYDEYSSTVKSGSAVASAEEDSNEEIDDDDSRLQIDQAGESNSQESQGDEEEEGMTGIGEEAEGDDEEEGGEVQVEGLDGTVLMVANDVDGNEILIRRSVSEMGDDEDDESMGEVAGLIYQEDNGNDNEDENAYDNENENQVQENDNGDEDEEEGYSNEFDHDVAEEMEEEMEVEEGDKTGEEEDDTDDNSSAKNNVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00438255;
90% Identity: iTF_01273963;
80% Identity: -