Csp013588.1
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- -
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000009.1:7136086-7144470[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 6.4e-06 0.0007 20.3 1.0 1 23 219 241 219 241 0.98 2 31 0.0028 0.3 12.0 1.9 1 23 264 287 264 287 0.96 3 31 0.00023 0.026 15.4 1.0 2 23 294 316 293 316 0.96 4 31 0.00022 0.024 15.5 0.5 1 21 336 356 336 357 0.95 5 31 0.0043 0.47 11.4 0.1 3 23 446 466 444 466 0.95 6 31 0.088 9.6 7.3 0.1 1 23 472 495 472 495 0.86 7 31 0.00012 0.013 16.3 0.1 1 23 558 581 558 581 0.96 8 31 0.011 1.2 10.2 0.4 1 23 587 610 587 610 0.96 9 31 0.15 17 6.6 1.9 1 23 623 645 623 645 0.97 10 31 1.6e-05 0.0018 19.0 1.1 3 23 686 707 684 707 0.95 11 31 0.11 12 7.0 0.9 2 23 767 790 766 790 0.95 12 31 3.2 3.5e+02 2.4 0.0 2 23 799 821 799 821 0.84 13 31 0.13 14 6.8 0.1 2 23 828 850 827 850 0.95 14 31 1.3e-05 0.0015 19.3 1.2 1 23 858 880 858 880 0.98 15 31 0.034 3.8 8.6 0.9 3 23 913 935 911 935 0.91 16 31 0.00021 0.024 15.5 3.3 1 23 938 961 938 961 0.97 17 31 0.0026 0.29 12.1 0.2 2 23 968 990 967 990 0.95 18 31 0.0033 0.36 11.8 5.1 1 21 1016 1036 1016 1037 0.95 19 31 0.0028 0.3 12.0 1.8 2 23 1051 1072 1050 1073 0.93 20 31 0.23 25 6.0 0.9 1 23 1076 1099 1076 1099 0.94 21 31 0.0022 0.25 12.3 1.7 2 23 1106 1127 1105 1127 0.95 22 31 0.99 1.1e+02 4.0 0.2 2 23 1135 1157 1135 1157 0.95 23 31 3.7 4.1e+02 2.2 0.0 2 23 1164 1186 1163 1186 0.87 24 31 0.23 25 6.0 2.7 2 23 1195 1217 1195 1217 0.96 25 31 0.42 46 5.2 0.7 2 23 1223 1245 1223 1245 0.91 26 31 0.11 12 7.0 0.2 1 23 1305 1328 1305 1328 0.95 27 31 0.00044 0.048 14.6 1.1 1 21 1353 1373 1353 1374 0.94 28 31 0.51 55 4.9 1.3 2 23 1470 1492 1469 1492 0.94 29 31 0.36 40 5.4 1.4 2 23 1499 1521 1498 1521 0.94 30 31 0.71 78 4.5 2.5 1 23 1532 1554 1532 1554 0.97 31 31 0.46 51 5.0 0.5 3 20 1563 1580 1563 1582 0.94
Sequence Information
- Coding Sequence
- ATGGAGTCGAGGGAACGTTACGACGAATTGTGCAGGCTGTGTGCCTCTTATGATGCAGTTAAAATGGATATATTCGGACAGGAAGGAAAGAATCGTCAGCTAGTCGACAAAATCCAGACGTGTCTTCCTTTCAAGATTGCCGAGGATGATCGACTGCCAAAGTGTTTGTGCTACAGATGTATGTACAATCTTGAGAATTTCTACGACTTCAGAACAGCCTGTGTTAATGCTGTTGCTGTATTGGAGAGAACTCTACCACCGAGTGAATCTAAAAATGGCCAGGTACAAAATGACACGGAGAAGCACTTGGAGTTACGTTCAGAGTTACTCaaagagaaggagaaaatGCCAATTTTAATTCCAGAAGCGCCGATAGTCAATCCAAATGCAGCCCTTGGCACTCCACCTCGATTAAACTCTGATGGGGAGGCAGATCATGAGATTGAAGACGAAGTGATGGACCAAAGTGGAACAGACGAAGgAATGGACGATGCAGAGGATAGAAAATCGGACGAGTACGAGATGGATATGGAGACAAATCCAAGTGACTTTCTCGAAATGCCACCGATGGTAACTGACGATGCAGATGAATCCCATAATCAACATTTAATCACCCCCGCACCCTTTCAACACACATCAGAGCAGCATGAGGTGTATGTGTGTTCTCTCTGCAACAAGGCATTCAGCTCAAAGGGCCATTTGTCCCTCCATGCAAGAATACACGTGGGTGCTGGCGACGTAATAGGCGAGAAAGTTATCACTGATGACCATACATCGTACAAACGTCCATACCAGTGTGACTTGTGCAACAAATCTTACTCAACAGCTAAACACAGGTGGGGGCACGTATCAACGACTCATCGAGGTCATCCAGCAGTCACATGCAGATACTGCTCAAGAATATATTCAACAAGGACAAATCTTGAGGAGCACATTAAATCGAGACATACTGGTTTACCACCACTTCCAGATATGTCAGTACCATATGTACAACAGGACACAAGATATCAGTGCAAGACATGTCCAAAAATGTATACAAATGTCACGGATTTGAATAAACACAGTCGAGTGTGTATTGGAGATGGTCCAAGGGAGTCTACTAATCGTCTTCACCACCAACCCAAAGGTAAATGTCTGATGGACACCTCAGATGTATCTAGTTTAGAGTCTGATGATGAAAACAGAGAGTATCGTAATGCAGAggcaaaattatcaaaaaatccacaattaaCAATTCTCAAACAAGCCTTGACTAGAACAGATGAAAAAACATCACCCTACAAATCATTAAAATCCATCAACAATGAGAATGAAcaggagatgaaaaaatggtTTTGTGAATTTTGTCCCCAGAGTTTTACGTCAGTGGATGCACTGAAAGATCATGAGATAAGTCACGAGTCTGATAAACCCTACATTTGTATATTGTGTGAAAAAGATTTTGTCCTAAAGTCATCTCTCAGTCGTCACATTGTCGCCTCCCATGGTGTTGATCCAGTGCCAATAATTGACAGTGAGACTTGTTTAAAGAAGAATGTATTAGCTAAATCAAGAATTGAGGAATTGAAACGTGAACCGCCCGCATCACCATTCTCTCCACTGCCGAGGATAGATAATGAAGACGATTATCCGGATAGTAGAGACGATAATATGATTGAAATTGAGACTGTCTTTGTGTGTGAAATATGTACTAGAGATTTCAATGATCGTGCATCACTGTGGCTTCACATTAGAGCAACCCACAAAGAATTTGCTGCATTTGCCTGTGGAGTTTGTTTAAAAATATGCTCTGATAATGAACAATTATTGAGTCATGTTAATATGTATCATGGTGGCTCAAAGTTACTAGTATCTGAACAGAGAAGGTACAGTTGTACAATATGTGGCCGTCAGCATGActccagaaaaaaattgatgacgCACGTCTCGATACACAACATTGATCCAACCTATGATCCAGCCAGTTTTGTTCAGCTCAACAGCAATTACTACAATGAATGTTTGAATAATGATCAGGAGGGTGATTTTGATGCTGAGGATGGGGAAAAAGTTAATTGTTATGTAtgcaaaaaatcatttccCAATGAGGATCATTTAATACGTCATCAGAGAAATGCTCATAAGAGTGATCAGCTATTATTGGGTGAACCATCAACAAATGGTGGTAGTATTAATCCAAATGGAAATAAAGCACAATATCACTTATTTTTTGTCTGTGAATTATGCGGAAGTTCTCATCCATCAAAATGGGAACGATGGCTACATGTGAGCAGTGTTCATGGAGGAGAGATAGCAATAAGATGTGAGCGAGCTGATTGTGCTAAAATATTTGCCACAAAGTCACTGAAAAATGAACATTTGCAGCATCACATGCTCCAAGGATCATCACCCAATACTTGTGAAATATGTGGCAAACTGTGGGGCAGCAGAGTTGACTATTGGAAGCATGTTATGGGAGTCCATGCTGACACAGTGCCATTAATATGTGGTGTTTGTTTAAAGGTATTTCCAGATGTTTTACAACTTAGTAGTCACGTTAAATCCAATCACTGGCCACTCACCAACGGTGACTTTAGTTGTGATATTTGTGGACGTCCTTATtccaataaatcaaaaatgtcaagacacAGAAAGATACATGGATTGGATCATGAGGGAGTTATTAACAATGGtaataatgaatcaataaatGATACAATTAATTCAGAGCACAGTCCACCTGAAGTGGATCTCAACTGTGAAATGTGCactgatttgagtttttcatcGTGGGAGGATTTGTGCAATCATCGTAGATTAATACATGCACTTTTTCCCTGTGATTTATGCAATAAATGTTATGGTAGAACTTCACACTTGTGGAAACACGTTAATAGAGTTCATAAAGGCCACAAAGATGTTACATGCCCGTATTGTATGAAAACAAGCGCCTCCAAGGATCATTTAGCAGCCCACATTGCTAAAATTCATCGTTATGAGCCTGAAACTAAGGAGAGCAATGATTCAGGTAATTATGCATCACCCAGTGCTGAAGAGGAAACTATTCATCACTGTGAAAAATGTAACAAGGGCTTCCACAAGCGTTATCTACTCCGTCGTCATATGAAAGGCTGTCAAAATTATCGTAAAGATCCTGGTGCATTGCTAACACGATGCAGAGCATgtgagagaatttttaaagATCGTGCAAGTTTACAAAAACATATTGAGAATCATCACAGTAGTTATACTTGTCATTTGTGTGACGAAACAATAACATCGAAATTGGGTATAATGACCCACAATAGAATCAATCATATGCATCATCCTGATTTAACTTGCAGCAGTTGTAAAAAACTCTTTAGAACACAGGACGATTTGGAGTCACACAAGAAGGACCATAAATATCATAATTCACCCAATGTCTGTGATTTTTGTGGTGACACTgttgagaataaattgaaattaaaaatgcaCATTCTATCACTACACAGAaatgaaattggagtttcttgTGGTGTTTGCTTGATTCCAATGAAAGATCCAAAAGATTTGAAGAAACATGTGGAAGATGTTCATGCTGGTATACTATTGAAACCCAATACATGTCAGGTTTGTGGTAAACAATATGCCTCCAAATGGAAAGCATTTGAtcatacaaaaaaatgtcatggcAAAGTATTTAGAACTTGTAAACAATGTTTAGCAGTATTTACCACAGATTCTGATATTAGACATCATTACGAGGACATACACAATGTACCCAAAGATCAATTGGCAGGCTTTGAAAATCATGTAGAGACAACCACTAAAACAGAGGATTTAACAGTGGCGGTTAAAGAAGAACCTGAGGACGTAGACATTGAGGTAGATGGCAGTTGCGATGATGGTACTCATACAGTGTCAGATGCTAAACGCAAGCGATCTGACACATTCGATTGTGATATCTGcccagaaatatttttaaatcgtcAGACATTATCAGAGCACTACAAAAATGTTCATAATAAAGATCCTGAGAGAATgtttaagaaaattaaaattggtacaaaaaagagaatgagagCTCGAGAAAATTTTGAGTGTAAAAATTGCACCAAACAATTTAGTACAAAAACATTATTCTGGAATCATATTGACACGTGTACACGAACAAGTTCCAAGGATGATACGACAAGAGCCAATTACTCAACATCAATCCTTGAGACTCATTTGAAGAATaacaatcaaattaaaaaagagCCACTGGATGAGgagaatttaaatattccTGATTTCAATCTCTTTGAAGATATTAATCTCCAATTATCTGGACAGAAACCAATTCCAAATCTAATGCCACTGTCTCAAGTAAAAATTGCCCAAAACATAAAGTGTTATAGAAAGGATTCAAGAAAGGTCTACGACGAATCAACCAATACTGTTTGTGCTTGTGAAGTGTGTGGTAAGCAGTGGCCAGCAAAAAAACACCTTTGGCAGCATTTAATACGATTCCATCGAGCTGAGGCAGCTGTCACTTGTGGAGTTTGCTTGAAACTCTGTACCACCTATAAACAACTCTCCCAACACTTGAAGGACGCACATGAGGCTATTTTATCATGTGAGGGGAATAATTTTACCTGTAAAACGTGTGGAAGATATCACAACGCGAGAAGTAAACTTTTACTACATATGAGCATACATATCAATAACAATGAGCACCTTTGGTGTTCAAAGTGTGCCACGAGTTTCGAGACTCAAGAGAAATTGGATCAGCATACTGATAAGTGTTCTGTTAAACGCAGAGAGGCTGAATCTGAGGAGCACAGTATTGATAATGATGAGGACATGATGAAACATGAGAATGAGGAAGATAAGGGAAGTTTGATTGGAGATGGGGCATCTTTGATGGAGGAAGTGGAGGAGGATGTTGATTTTGATTCGGAACAGGAGGATGGCAGTGATAATGGTGATAATTCAGAGCACTCTGCTGATTCTGAGGGCAGTAGTGAGTCTGCCAGTGAAGAGGAGAATGTAGAACACGAGGGAGAGTCGAGGGCAAACAGTGGAGTGACTGGCGATGTGAGTTGTCACACTGATGAGGAGGACAGAGATTCTTCAAACACACCTGAGCCAGTTTCTCAAGTACCTGAAACTTTGAAACCTACTGAATCAAGCTCTGAGGATGTACTCAATGACGAGCATCATAAACAAGAGGATCAAGAGAAAGCtgcagaaaatttcaaggcTGAGGGAAAATCAACAGAGGACTCTGATGACGAGGGACCACCAATTTTGAGCCCTATCATGCCACTGACATCTGATAATGACGCTGAAGAGCCTCCCGCCTCACCTGAGGAAGAAAATAGCGATAAAATTAGTGGAGAGGGCTCACCGAGTGCCAAGGAAGATGTAGATCCTGAGGAGGACGAAATTCCTGAATTAGATGGAATTGTAAGTGCAGATGAAGCTGAAGCTGTTGATGATTACAACGAAAACTCATCAACAGCAAAGTCTGCAAGTCCAGTGCCATCTGCTGAGGAAGATTCTAATGaggaaattaataatgatgatgacaGCAGACTTCAAATTGATCAAACTGGAGATTCTAATTCTAAGGTTTCTGATCAAGATACGGACAGGGATAATCCGGAGGAGGGGATGGTGGTGGTAGTGGcggctgctgctgctgctgatAGTGAAGAGCTTGAAGAGGCTAATGACGAAGAGAATGAGAGTGAGGAGGAAAGTAGTGAGATGAAGATCGAGGGATTGGATACTGTTGGTACTGTTCTCATGGTTGCTAATGATGCTGATGGTAATCAGATATTGATTCAACAAAGTGTTTCGGAAATGAGTAATAATGATTCTATGGAAGAAGTTGctgaatatatttatcaagAGGAGAATGACAATGATGACgagaatgataatgaaaacgttaatgataatgatgatgagtATGAGGAGGAAAACTACATCAACGAAATGGAGGATCAGGTGGAGGTGCAGGAGGGTGACAAGACTGGTGAGGAGAGTGACGACACTGACGATAATTCGAGTGCCAAAAACAATGTGTCAAGGACGTAG
- Protein Sequence
- MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVAVLERTLPPSESKNGQVQNDTEKHLELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEDEVMDQSGTDEGMDDAEDRKSDEYEMDMETNPSDFLEMPPMVTDDADESHNQHLITPAPFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHTGLPPLPDMSVPYVQQDTRYQCKTCPKMYTNVTDLNKHSRVCIGDGPRESTNRLHHQPKGKCLMDTSDVSSLESDDENREYRNAEAKLSKNPQLTILKQALTRTDEKTSPYKSLKSINNENEQEMKKWFCEFCPQSFTSVDALKDHEISHESDKPYICILCEKDFVLKSSLSRHIVASHGVDPVPIIDSETCLKKNVLAKSRIEELKREPPASPFSPLPRIDNEDDYPDSRDDNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLSHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPTYDPASFVQLNSNYYNECLNNDQEGDFDAEDGEKVNCYVCKKSFPNEDHLIRHQRNAHKSDQLLLGEPSTNGGSINPNGNKAQYHLFFVCELCGSSHPSKWERWLHVSSVHGGEIAIRCERADCAKIFATKSLKNEHLQHHMLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVLQLSSHVKSNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDHEGVINNGNNESINDTINSEHSPPEVDLNCEMCTDLSFSSWEDLCNHRRLIHALFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCPYCMKTSASKDHLAAHIAKIHRYEPETKESNDSGNYASPSAEEETIHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCDETITSKLGIMTHNRINHMHHPDLTCSSCKKLFRTQDDLESHKKDHKYHNSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHAGILLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRHHYEDIHNVPKDQLAGFENHVETTTKTEDLTVAVKEEPEDVDIEVDGSCDDGTHTVSDAKRKRSDTFDCDICPEIFLNRQTLSEHYKNVHNKDPERMFKKIKIGTKKRMRARENFECKNCTKQFSTKTLFWNHIDTCTRTSSKDDTTRANYSTSILETHLKNNNQIKKEPLDEENLNIPDFNLFEDINLQLSGQKPIPNLMPLSQVKIAQNIKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYKQLSQHLKDAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHLWCSKCATSFETQEKLDQHTDKCSVKRREAESEEHSIDNDEDMMKHENEEDKGSLIGDGASLMEEVEEDVDFDSEQEDGSDNGDNSEHSADSEGSSESASEEENVEHEGESRANSGVTGDVSCHTDEEDRDSSNTPEPVSQVPETLKPTESSSEDVLNDEHHKQEDQEKAAENFKAEGKSTEDSDDEGPPILSPIMPLTSDNDAEEPPASPEEENSDKISGEGSPSAKEDVDPEEDEIPELDGIVSADEAEAVDDYNENSSTAKSASPVPSAEEDSNEEINNDDDSRLQIDQTGDSNSKVSDQDTDRDNPEEGMVVVVAAAAAADSEELEEANDEENESEEESSEMKIEGLDTVGTVLMVANDADGNQILIQQSVSEMSNNDSMEEVAEYIYQEENDNDDENDNENVNDNDDEYEEENYINEMEDQVEVQEGDKTGEESDDTDDNSSAKNNVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00438255;
- 90% Identity
- -
- 80% Identity
- -