Aalt022024.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aleiodes alternator
Gene Symbol
-
Assembly
GCA_963921955.1
Location
OY998112.1:4797046-4805695[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 6.4e-06 0.00082 20.3 1.0 1 23 218 240 218 240 0.98
2 30 0.0028 0.36 12.0 1.9 1 23 263 286 263 286 0.96
3 30 0.00023 0.03 15.4 1.0 2 23 293 315 292 315 0.96
4 30 0.00023 0.029 15.4 0.5 1 21 335 355 335 356 0.95
5 30 0.016 2.1 9.6 0.1 3 23 454 474 452 474 0.95
6 30 0.088 11 7.3 0.1 1 23 480 503 480 503 0.86
7 30 0.00012 0.016 16.3 0.1 1 23 566 589 566 589 0.96
8 30 0.0074 0.95 10.7 0.5 1 23 595 618 595 618 0.96
9 30 0.15 19 6.6 1.9 1 23 631 653 631 653 0.97
10 30 3.6e-05 0.0047 17.9 1.0 3 23 694 715 692 715 0.95
11 30 0.082 11 7.4 1.1 2 23 773 796 772 796 0.93
12 30 3.2 4.1e+02 2.4 0.0 2 23 805 827 805 827 0.84
13 30 0.61 79 4.6 0.0 2 23 834 856 833 856 0.91
14 30 1.3e-05 0.0017 19.3 1.2 1 23 864 886 864 886 0.98
15 30 0.21 27 6.1 0.4 3 23 918 940 916 940 0.84
16 30 0.00022 0.028 15.5 3.3 1 23 943 966 943 966 0.97
17 30 0.0026 0.34 12.1 0.2 2 23 973 995 972 995 0.95
18 30 0.0033 0.43 11.8 5.1 1 21 1021 1041 1021 1042 0.95
19 30 0.0028 0.35 12.0 1.8 2 23 1056 1077 1055 1078 0.93
20 30 0.22 28 6.1 0.9 1 23 1081 1104 1081 1104 0.94
21 30 0.0073 0.94 10.7 1.4 2 23 1111 1132 1110 1132 0.95
22 30 0.99 1.3e+02 4.0 0.2 2 23 1140 1162 1140 1162 0.95
23 30 3.7 4.8e+02 2.2 0.0 2 23 1169 1191 1168 1191 0.87
24 30 0.23 30 6.0 2.7 2 23 1200 1222 1200 1222 0.96
25 30 1.3 1.7e+02 3.6 0.9 2 23 1228 1250 1228 1250 0.92
26 30 0.07 9 7.6 0.2 1 23 1307 1330 1307 1330 0.95
27 30 0.00034 0.043 14.9 1.1 1 22 1355 1376 1355 1376 0.95
28 30 0.51 65 4.9 1.3 2 23 1475 1497 1474 1497 0.94
29 30 0.17 22 6.4 1.4 2 23 1504 1526 1503 1526 0.94
30 30 0.71 92 4.4 2.5 1 23 1537 1559 1537 1559 0.97

Sequence Information

Coding Sequence
ATGGAGTCAAGGGAACGTTACGACGAATTGTGCAGGCTGTGTGCCTCATATGATGCTGTTAAAATGGATATATTCGGTAAGGAAGGAAAGAATCGTCAACTAGTCGACAAAATCCAGACGTGTCTTCCCTTCAAGATTGCTGAGGATGATCGACTACCAAAGTGTTTGTGCTACAGATGTATGTacaatcttgaaaatttttacgaCTTCAGAACGGCCTGTGTTAATGCTGTTGCATTATTGGAACGATCACTACCACCTACTGAATCCAAAAATGGTCAAGTTCAGAATGACATGGAAAAACATTCAGAATTACGCTCTGAGCTGCTTaaggagaaggaaaaaatgccAATTTTGATACCAGAAGCACCAATTGTTAATCCAAATGCTGCATTGGGTACTCCACCTCGATTAAACTCGGATGGTGAAGCAGATCCAGAAATTGAGGAAGTTATGGATCATAGTGAAACAGAGGAAGGAATAGAAGACACAGAGGACAGAAAATCTGATGAATATGAGATGGACATGGAGACAAATCCCagcgattttttggaaatgccTCCTATGGTGACAGATGATTTGGAAGAACCACAGAatcataatttcaattcaactgCTGTCTTTCAGCACACATCAGAGCAGCACGAGGTTTATGTTTGTTCACTATGCAATAAGGCATTTAGCTCCAAGGGTCACCTGTCACTCCATGCACGTATACACGTGGGTGCTGGAGATGTAATAGGCTCGAAAGTAATCACTGATGACCACACATCGTATAAACGTCCATATCAGTGTGATTTGTGCAACAAATCTTACTCAACAGCCAAACACAGGTGGGGACATGTATCAACGACACATCGGGGCCATCCAGCTGTAACATGTAGATACTGTTCGAGAATTTATTCAACGAGAACTAATCTTGAGGAGCACATAAAATCTAGACACACTGGTTTACCACCACCAACGGAATTACCAGTATCCTATGTACAACAGGATACTAGATATCAGTGTAAAACATGTCCAAAAATGTATACTAATGTCACTGATCTCAACAAACACAGTAGAATTTGTGTGGGTGAACGTCAGAGAGAATTAACGAGTCGTCCACCTCCAATTCAACCAAAGGGAAGAAGTCTCATGGATACTTCGGATATGTCGAGCTTAGAATCAGACGAGGAGAATCGAGAATACAGAAATGCTGAAGccaaattatcgaaaaatccaCAGTTAACAATTCTGAAACAAGCACTAACCAGAACTGATGGTTTAAAACGagataataatgagaaaaattcaccttACAAAAGTTTAAAGCCTATTAAAACTGAGAATGAACAGGAGAGCACAAAAAAATGGTTCTGTGAATTTTGCCCACAGAATTTTACTTCGGTTGATGCTCTCAAAGAGCACGAAATTGTTCATGAATCTGATAAACCATACATTTGTATACTTTGTGAGAAAGATTTTGTCTTGAAATCATCACTTAGTCGTCATATTGTTGCTTCACATGGCGTTGATCCTGTACCCATAATTGACAGTGATACTTgtttaaaaaagaatattctGCAAAAAACGAGAATCAATGAATTGAAACGTGAACCACCGCCATCACCATTTTCACCAGACAGACAATTAGATAATGACGAGGATGATCCAGAGAGTAGAGATGATAATATGATTGAAATTGAGACTGTATTTGTTTGTGAAATATGCACGAGAGATTTCAACGATCGTGCCTCACTCTGGTTGCATATAAGAGCAACGCACAAAGAATTTGCTGCATTTGCCTGTGGTGTTTGCTTGAAAATATGCTCTGATAATGAACAATTGTTGAATCACGTTAATATGTATCATGGTGGCTCAAAGCTCTTAGTATCAGAACAAAGAAGATACAGTTGTACAATATGTGGGCGTCAGCAtgattccagaaaaaaattgatgacacACGTTTCAATACACAATATTGATTCAAGCTATGATCCAGCAAATTTTGTCCAATTAAACAGTAATTATTACAACGAAAATCTTAATACAGAGCAAGATGGTGATTTTGATGCTGAGGATGGAGACAAAGTGAATTGTTATGTATGCAGAAAATCATTTCCCAATGAGGATCATTTGATACGTCATCAGAGAAATGCACACAAAACCGATCAATTATTGGGTGAGCCATCAGCAAATGGTGGAGTTAATCCAAATGGTAATAAAGCACAGTATCATCTATTTTTTGTTTGTGAACTCTGTGGCAGCTCTCATCCATCGAAATGGGAGAGATGGCTACATGTTAGCAGTATCCATGGAGATGAACCAACAATAAGATGTGAACGTCCAGATTGTGCCAAGATATTTTCCACaaagtcattgaaaaatgaacatgtACAGCATCACATGCTGCAGGGCTCATCGCCAAATACATGTGAAATATGTGGTAAATTATGGGGCAGTAGGGTTGATTATTGGAAACACGTGATGGGTGTACATGCTGATACAGTGCCATTAATTTGTGGTGTATGCTTAAAGGTATTTCCAGATGTTATGCAACTCAGTGGCCATGTGAAAGCCAATCATTGGCCATTAACAAATGGTGATTTTAGTTGTGATATTTGTGGACGTCCTTACtcgaataaatcgaaaatGTCGAgacatcgaaaaattcatggattgGATGTTGATGGATTCAATAATGGTGTAAATGAAACAATAAATGATTCTATGAATTTAGAACAGAGCCCACCAGAAGTTGATCTCACTTGTGAAATGTGTGCTgatgttaatttttcatcatggGAGGATCTTTGTAATCATCGTAGGCTCATTCACGCTCTATTCCCATGTGATTTATGTAATAAATGTTATGGTAGAACTTCACATCTTTGGAAGCATGTTAATCGAGTGCACAAAGGTCACAAAGACGTAACTTGTCCCTACTGCATGAAAACAAGTGCTTCCAAGGATCATTTAGCAGCGCACATTGCTAAAATTCATCGTTACGAGCCAGAAACAAAGCAGAGCAAAGAGTCAACAAATTATCCATCACCAACTGCTGAAGAAGAAACTATTCATCattgtgaaaaatgtaataaaggCTTTCACAAACGTTATTTACTCAGACGTCATATGAAAGGCTGCCAGAATTATCGTAAAGATCCTGGTGCATTACTAACACGCTGTCGAGCATGCGAAAGAATATTTAAAGATCGTGCAAGTCTACAGAAACATATCGAAAATCATCACAGCAGTTATACTTGtcatttatgtgatgaaactATCACGTCTAAACTTGGTATAATGACACACAATAGAGTCAATCACATGCATCATCCCGATTTAACATGCGCCAGTTGTAAGAAGCTTTTTAGAACTAAAGAGGATTTAGAATCACACAAAAAAGATCACAAATATCATAATTCACCAAATGTCTGTGATTTTTGCGGCGATACAgttgagaataaattaaaattaaaaatgcacATTTTATCACTTCACAGAAATGAAATTGGTGTTTCATGTGGTGTTTGCTTGATTCCAATGAAGGATCCCAAAGATCTTAAAAAACACGTTGAAGATGTACATGCTGGAATACTTCTCAAGCCTAATACATGTCAAGTTTGTGGTAAACAGTATGCATCAAAGTGGAAAGCCTTTGATCACACGAAAAAGTGTCATGGAAAAGTATTTAGAACTTGCAAACAATGTTTAGCAGTATTTACAACTGATTCAGATATTAGATATCACTATGAGCACATACACAATGTTCCAAAGGATCAATTAGCTGGCTTTGAGAATCACGTTGAATTAGCAAGTAAAACAGATGAACCTGTAGCTGTTAAAGAGGAACCTGAGGATTTAGAATACGAGGATGGTGTATACGATGATAATCCTCATGTTCCCGAATCAAAGCGCAAAAGATCCGATACATTTGATTGTGAAATATGtccagagatatttttaaatcaacAAACATTATCAGAGCACTACAAAAATGTTCACAATAAAGATCCCGAGagaatgtttaaaaaaattaaaactggCACAAAGAAACGCATGAGAGCACGtgagaattttgaatgtaAAAATTGCACCAAACAATTTAGTACAAAGACTCTATTCTGGAATCACATAGAAACGTGTAAACGAAGAAGTTCAAAGGATGAAACAAGACCAAGTTATTCAACATCAATTTTAGAGtctcatttgaaaaataataatcagatTAAAAAAGAGCCAGTTGATACGGCTACTAATGAAACTAATCTCAATATACcagattttaatttatttgaagacaTTAATCTTCAATTATCTGGACAGAAAGCAATACCAAATTTAATGCCACTGTCTCAggtaaaaatttcacaaaacaTGAGATGTTACAGGAAGGATTCTAGAAAAGTTTATGATGAATCAACGAATACTGTGTGTGCCTGTGAAGTTTGTGGCAAACAGTGGCCAGCTAAGAAGCATCTTTGGCAGCATTTGATACGTTTTCATCGTGCAGAGGCTGCTGTTACATGTGGAGTATGTTTAAAATTATGTACAACGTACAAAAATCTTTCACAACACTTGAAAGATGCACATGAAGCTATTTTATCCTGTGAAGGAAATAATTTTACTTGTAAAACGTGTGGAAGATATCACAATGCTAGGAGTAAACTTCTTCTTCATATGAgtattcatattaataatgAGCATATCTGGTGTGAGAAGTGTGCTGTTAGTTTTGATTGCCAGGAGAAATTAGATCAGCATTCTAATAATTGTATTGTCAAGCGAAAAGAAGCGGAATCTGAGGAGCATGGGGACGAGATGGATGAAGAGATGATAAAGCATGAGAATGAGGAGGACAAGGGCAGTTTGATTGGTGATGGTGCATCACTAATGGAAGAAATTGAGGAGGATGCTGATTTTGATTCTGAACCAGATGCCAGTGATAATGGCGATAATTCGGGTCAATCTGAGGACTCGGGCGGTAGCAGTGATTCTGGTACTGAGggggaaaatgaagagaatgaagTAGAGTCAAGAGCTAATAGTCGAGTCACTGGAGATGTTGACTGTCATACTGACACTGAGGAGAGAGACTCGGACACAGCTGAGCCTACTTCTGAAGTGccagaaaattctccaaaaccAGGTGAATCTAAATCCAGTATTTCCAACGAAGAGATTGAGCAACATGACGTTAAAGAAAAGGCAAAATCCGATGATGAACAAGATAATGTTAAAGAAGCTAATGAGAGCAAGTCAGAGATTGGGGAAAAATCACAGGATGATTCTGACGACGAGGGACCTCCCATTTTGAGTCCCATGATGCCATTGCCTCCAGAGAACGAGTCTCAGGAGCCTCCTGCCTCTCCTGAGGCTCATGAAGATGACAACAGTCAACAATGTTCACCAAGCATCAAAGAAGAAgccgaagaagaagaagaagaagaggaggaggaagacGAAATTCCTGAACTCGATGGAATGGAGAATACTGAAAAAGAAGCTCCATCACCAAACTCAAATGTCGTTGATTATGAGGAATACTCTTCGACAGCTAAATCAGCAAGTGCTGCAGCATCTGCTGAGGAAATTGAGTCTGGTGATGATATTTATGACGATGACAGTCGATTGCAGATTGATCAATCAGCTGATGGCAACTCGAAGGGCTCGGAGGAGAGCGGAAGTATCAGGGAGAATGATCAGGCAGAAGATGAAGAGATGTTTGTAGATGAAGATGGTGAAATTGAAGAGGCTGAGGAAGAGGAGAGCAATGAAGTGCAGATTGAGGGCTTGGATGGTACTGTTCTCATGGTTGCAAATGATGCTGATGGTAATCAGATATTAATACAACGAAATGTCTCAGAAATGAGCAATGATTCAATGGGTGAAGTTGCTGGTTTTATTTATCAGGaagaggaaaatggaaatgaagatgaagaacAGGAAGAAGCTGATGAGGAGGATGATGCTGAACAGGCTGAGGAGGGAGAGGAAATCGAGGAGGGTTACAGTAATGACGTTGTAAATGAAGCAGATGAAGAGGAGGAAATGGAAATAGATGAGGCTGAAAAGACTGGCGAAGAGGGTGAAGATACTGATGATAATTTGAGTGCCAAAAACAATGTGTCAAGGACGACGTTTCAGTGA
Protein Sequence
MESRERYDELCRLCASYDAVKMDIFGKEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERSLPPTESKNGQVQNDMEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADPEIEEVMDHSETEEGIEDTEDRKSDEYEMDMETNPSDFLEMPPMVTDDLEEPQNHNFNSTAVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGSKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHTGLPPPTELPVSYVQQDTRYQCKTCPKMYTNVTDLNKHSRICVGERQRELTSRPPPIQPKGRSLMDTSDMSSLESDEENREYRNAEAKLSKNPQLTILKQALTRTDGLKRDNNEKNSPYKSLKPIKTENEQESTKKWFCEFCPQNFTSVDALKEHEIVHESDKPYICILCEKDFVLKSSLSRHIVASHGVDPVPIIDSDTCLKKNILQKTRINELKREPPPSPFSPDRQLDNDEDDPESRDDNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNIDSSYDPANFVQLNSNYYNENLNTEQDGDFDAEDGDKVNCYVCRKSFPNEDHLIRHQRNAHKTDQLLGEPSANGGVNPNGNKAQYHLFFVCELCGSSHPSKWERWLHVSSIHGDEPTIRCERPDCAKIFSTKSLKNEHVQHHMLQGSSPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVMQLSGHVKANHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDVDGFNNGVNETINDSMNLEQSPPEVDLTCEMCADVNFSSWEDLCNHRRLIHALFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCPYCMKTSASKDHLAAHIAKIHRYEPETKQSKESTNYPSPTAEEETIHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCDETITSKLGIMTHNRVNHMHHPDLTCASCKKLFRTKEDLESHKKDHKYHNSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHAGILLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRYHYEHIHNVPKDQLAGFENHVELASKTDEPVAVKEEPEDLEYEDGVYDDNPHVPESKRKRSDTFDCEICPEIFLNQQTLSEHYKNVHNKDPERMFKKIKTGTKKRMRARENFECKNCTKQFSTKTLFWNHIETCKRRSSKDETRPSYSTSILESHLKNNNQIKKEPVDTATNETNLNIPDFNLFEDINLQLSGQKAIPNLMPLSQVKISQNMRCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYKNLSQHLKDAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNEHIWCEKCAVSFDCQEKLDQHSNNCIVKRKEAESEEHGDEMDEEMIKHENEEDKGSLIGDGASLMEEIEEDADFDSEPDASDNGDNSGQSEDSGGSSDSGTEGENEENEVESRANSRVTGDVDCHTDTEERDSDTAEPTSEVPENSPKPGESKSSISNEEIEQHDVKEKAKSDDEQDNVKEANESKSEIGEKSQDDSDDEGPPILSPMMPLPPENESQEPPASPEAHEDDNSQQCSPSIKEEAEEEEEEEEEEDEIPELDGMENTEKEAPSPNSNVVDYEEYSSTAKSASAAASAEEIESGDDIYDDDSRLQIDQSADGNSKGSEESGSIRENDQAEDEEMFVDEDGEIEEAEEEESNEVQIEGLDGTVLMVANDADGNQILIQRNVSEMSNDSMGEVAGFIYQEEENGNEDEEQEEADEEDDAEQAEEGEEIEEGYSNDVVNEADEEEEMEIDEAEKTGEEGEDTDDNLSAKNNVSRTTFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00438255;
90% Identity
iTF_00048133;
80% Identity
-