Cper019119.1
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- -
- Assembly
- GCA_951394215.1
- Location
- OX596223.1:10755538-10757460[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-09 1.7e-06 28.1 0.0 1 38 15 52 15 58 0.91
Sequence Information
- Coding Sequence
- ATGCCGCGTAATTATAAGCGTAAGACTGATCGTCAATCCTGGAGTGAGGAATCAATGCGCAAAGCTATAGAAGCAGTTCGCACTAATAAAATGGGCTGGCTTTTGGCGTCGAAGATATTTGGAGTACCACAAGCAACACTAAGAAGACATGCTTCTAATAGTAACAAAACTTTGGAGTCCTCTGCGAAGGGTCTAGGATGTTGGAAAGCTACTTTTACACCTGATGTGGAAAGAAAATTAGTTGAGCATTTGAAATTACTTGAATCTCGTTTGTTTGGACTGACGCGAACGTCTGTTCAAGAATTAGCTTTTGAGTTGGCTGAAAAAAACGGTTTTGCTCATAAATTTAACTCGCAAAAACAAAAAGCTGGACAAGAATGGTTAGAAGGGTTTTTGAGacgaaataaagatatttctttacGCAAACCAGAAGCTACTTCAGCTGCTCGTGCTCAGGCTTTTAATCGACCTCAAGTCAATAAGTTTTTTGAGATTTACGGAAATCTGCAGGAATCTGAGTACATCGGGCCACACAGAATTTATAATACTGACGAATCAAGCCTGTCTACTGTACAAAAACCACAGAAGATATTGGCTACTACTGGTAGGAAGCAAGTTGGCGTAATTACTAGCGCAGAACGTGGAactaacaccactgttgtttgtTGTGTTAATGCTATTGGTACCTTTGTTCCGCCGATGATGATATTTTctaggaaaaatatgaaaaatgaaTTGGTCGATGAAGCACCTCCTGGCACTTTAGGTGTAGCTCAACCATCAGGATGGATGACAACGGATTTATTTCTGAAATGGCTTAAACACTTTCAAAGTTTTGTTAAATCATCGATTGACGATAAAGTTATATTGATTGTCGATGGACATGTAAGCCACAAAGGgcttgaaactttagaatatgcCAAACAAAACGGCATTATTATTTTGTGTCTACCTCCACATTGCACTCATCGTCTCCAGCCTTTGGATGTCTCATTTTTCGCACCTTTGAAGACATATTTCAACCAAGAGACATCCAAATGGCTTAAACAACACCCAGGACGTGTTGTTACACAGTTTCAAATTGCTGGCCTGTTCAAAGAAGCTTATGGTAAGGCAGCTACAGTGCAAAATGGTTGTAACGGATTTAAAAGCACTGGGATTTGGCCTCTAAACCCTGAAATATTTCCTGATTATATGTACGAACCTGCAGAGACTACAAACATACCACTGGAAGACACCTCCAATATGCAATATCACCAGCAAATAGGTCCTATTCCAGTTCCCATAGCAGGACCCTCCACACAACAGCTAGACGATTTAATGTCACTTCCCGGTACGAACGATATCCAAGCTTCTGAAACTCAGCAACAAATAATTCGCGCCGTAACACCTGGCAATAATGACACAACAGTTCAAACAACCGACACTACTGAACCAGCAGACAATCCAACAGCAAACACTGGTCAAGACCTTATTCTATCTGCCCAAATTCGCCCTTCTATTGGTAATGAAGAACATACGTTGGCAGTGCCTATTGAAGTTTTATCTCCTGTCCCAAAAGGATATTACGTAAGTGGCCAAGGCAAACGTAAGCCAAAGAAACAGCAAACCTCTTTAGTTTTGACTTCAACTCCAAATATGAAAgaaattaaggaaaaaaatgAGCCTAAAGCTCCTTCAGAGAAGAAGAGACGAAAGGTTACCAAAACCATATTCCAAGAAGACAGCGAAGAAGAAAATTTTCCAAACTACGCGCAAGATGACGAAGAGGATTGCGCATGCATTTATTGCAACGATCTTTTTTCGCGATCAAAACCTGGAGAACATTGGTTGCGGTGTTCAAAATGTTCGCATTGGGCACATGCTTCTTGCGCGGACGTTTCTAAACGAACCAAGGGGTTCATTTGCGAGCTTtgcctttaa
- Protein Sequence
- MPRNYKRKTDRQSWSEESMRKAIEAVRTNKMGWLLASKIFGVPQATLRRHASNSNKTLESSAKGLGCWKATFTPDVERKLVEHLKLLESRLFGLTRTSVQELAFELAEKNGFAHKFNSQKQKAGQEWLEGFLRRNKDISLRKPEATSAARAQAFNRPQVNKFFEIYGNLQESEYIGPHRIYNTDESSLSTVQKPQKILATTGRKQVGVITSAERGTNTTVVCCVNAIGTFVPPMMIFSRKNMKNELVDEAPPGTLGVAQPSGWMTTDLFLKWLKHFQSFVKSSIDDKVILIVDGHVSHKGLETLEYAKQNGIIILCLPPHCTHRLQPLDVSFFAPLKTYFNQETSKWLKQHPGRVVTQFQIAGLFKEAYGKAATVQNGCNGFKSTGIWPLNPEIFPDYMYEPAETTNIPLEDTSNMQYHQQIGPIPVPIAGPSTQQLDDLMSLPGTNDIQASETQQQIIRAVTPGNNDTTVQTTDTTEPADNPTANTGQDLILSAQIRPSIGNEEHTLAVPIEVLSPVPKGYYVSGQGKRKPKKQQTSLVLTSTPNMKEIKEKNEPKAPSEKKRRKVTKTIFQEDSEEENFPNYAQDDEEDCACIYCNDLFSRSKPGEHWLRCSKCSHWAHASCADVSKRTKGFICELCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00373985; iTF_00373986; iTF_00373987; iTF_00373988; iTF_00373989; iTF_00373990; iTF_00373991; iTF_00373992; iTF_00373975; iTF_00373976; iTF_00373979; iTF_00373980; iTF_00373981; iTF_00373982; iTF_00373983; iTF_00373984; iTF_00373953; iTF_00373954; iTF_00373955; iTF_00373956; iTF_00373957; iTF_00373958; iTF_00373959; iTF_00373960; iTF_00373961; iTF_00373962; iTF_00373963; iTF_00373964; iTF_00373945; iTF_00373946; iTF_00373947; iTF_00373948; iTF_00373949; iTF_00373950; iTF_00373951; iTF_00373952; iTF_00373943; iTF_00373944; iTF_00373977; iTF_01183754; iTF_00936481; iTF_00356131; iTF_00356132; iTF_00875247; iTF_00044433; iTF_00044434; iTF_00935668; iTF_00935669; iTF_01429873; iTF_00449018; iTF_01367771; iTF_01367770; iTF_01367773; iTF_01367769;
- 90% Identity
- iTF_00428059;
- 80% Identity
- -