Basic Information

Insect: Stenoptilia bipunctidactyla
Gene Symbol: -
Assembly: GCA_944452705.1
Location: CALYCB010000060.1:1005155-1007119[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.1e-08 4.9e-06 27.4 0.0 1 39 15 53 15 58 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.1e-08	4.9e-06	27.4	0.0	1	39	15	53	15	58	0.91

Sequence Information

Coding Sequence: ATGCCGCGTAATTATAAGCGTAAGACTGATCGTCAATCCTGGAGTGAGGAATCAATGCGTaaagctatagaagcagttcgtaataataagatgggctggcttttggcatctaaaacatttggagtaccacaagcaactctccgAAGACATGCTTCGAATACCAACAAAGTTTTAGAGTCCAATTTAAAGGGATTAGGATGTTGGAAAGCTACTTTTCCACCTGAAGTGGAAAGAAAGTTGGTTGACCATTTAAAGTTACTCGAATCTCGTTTGTTTGGCCTGACGCGAGCTTCTGTGCAAGAATTAGCTTTTGAGATGGCTGAAAGAAATGGTTTTGCTCATAAGTTCAACCGGCAGAAACAAAAAGCTGGGCAAGAATGGTTAGATGGATttctgagacgaaataaagatatttcattacggaaaccagaagctacttcagctgctcgtgctcaggcttttaatcggcctcaagttcaaaagttttttgacatattcggaaatctgctagaaactgggaactttgggccacaccgaatttataatgcggacgaatcaagtctatctacggtacaaaaaccccaaaagatattggctacagctggcagaaagcaagttggcgtaataaccagcgcagaacgtggcaccaacacaactgttgtttgttgtgctaatgctgttggcacctttgttccgccaatgatgatattttcaagaaaaaatatgagaaatgaactggtcgatgaagcacctcctggcaccttaggtgtagctcaaccttcaggatggatgactacagatttatttctgaagtggcttaagcatttccaaagctttgtaaagtcatccattgacgatcaagttattttgattgtcgacgggcatgcaagtcacaaagggattgaaaccttagaatatgcaaaacaaaacaacggcattattattttatgtctacctccacattgcactcatcgtatgcagccgctcgacgtctcatttttcgcgcctttaaaaacttatttcaaccaagagacatccaaatggctaaaacaacacccaggacgtgtagttacacagtttcaaattgctgcgctgttgaaagatgcttatggtaaggcagctactgtgcaaaatggttgtaacggatttagaagcactggcatttggcctctaaaccctgaaatatttccagattatatgtacgaacctgcagagactactaacatacctctgatagacacctctaatgagcaatttcatgagcaatcagctcctagtccagtgcccatagccggaccttctacactgcaaccagttgatacagttttaactcccgaaattatcgatcttcaaactatgcaagcttctataactacacatataccacaacagcagcaaatggtctatgccgttacatctgaaaaaaatgatacagttcaaacatgcgaccctactgaacaaactgtcaattcaataacaaacactggtcaagacattattttacttgctccaaatcaaaatcggccgtttgttggttacagtgaacgtcgttcatcctatactctagtagtgcctattgaagaaatatctccaatcccaaaaggacgttacattagtgggcaagggaaacgaaagcctaagaaacgactaacctcattgatattaacttctaccccgaacatgaacgcaataaagtccaaaaatgaacctaaagctcctgcagagaagaagagacgaaaggtcactaaaaccttattcgaagatgatagtgaggaagaaaatttaccaaacaacgatcaagatgacgaagaggattgcgcttgcatatattgcaatgatctgttttccaggtcaagacctggagaagactggttgcggtgtgcaagccgctcgcactgggctcacgcttcatgcgcagacgttcctaaacgaacaaagcgatttatttgcgagctctgcctttaa
Protein Sequence: MPRNYKRKTDRQSWSEESMRKAIEAVRNNKMGWLLASKTFGVPQATLRRHASNTNKVLESNLKGLGCWKATFPPEVERKLVDHLKLLESRLFGLTRASVQELAFEMAERNGFAHKFNRQKQKAGQEWLDGFLRRNKDISLRKPEATSAARAQAFNRPQVQKFFDIFGNLLETGNFGPHRIYNADESSLSTVQKPQKILATAGRKQVGVITSAERGTNTTVVCCANAVGTFVPPMMIFSRKNMRNELVDEAPPGTLGVAQPSGWMTTDLFLKWLKHFQSFVKSSIDDQVILIVDGHASHKGIETLEYAKQNNGIIILCLPPHCTHRMQPLDVSFFAPLKTYFNQETSKWLKQHPGRVVTQFQIAALLKDAYGKAATVQNGCNGFRSTGIWPLNPEIFPDYMYEPAETTNIPLIDTSNEQFHEQSAPSPVPIAGPSTLQPVDTVLTPEIIDLQTMQASITTHIPQQQQMVYAVTSEKNDTVQTCDPTEQTVNSITNTGQDIILLAPNQNRPFVGYSERRSSYTLVVPIEEISPIPKGRYISGQGKRKPKKRLTSLILTSTPNMNAIKSKNEPKAPAEKKRRKVTKTLFEDDSEEENLPNNDQDDEEDCACIYCNDLFSRSRPGEDWLRCASRSHWAHASCADVPKRTKRFICELCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00408393;
90% Identity: iTF_01367773;
80% Identity: iTF_01367771;