Cpyr033328.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- -
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010001353.1:752483-754255[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-08 1.4e-05 26.0 0.0 1 38 15 52 15 58 0.91
Sequence Information
- Coding Sequence
- ATGCCGCGTAATTATAAGCGTAAAACTGATCGCCAATCCTGGAGTGAGGAATCAATGCGTAAAGCTATAGAAGCAGTGCTCAGTAATAAAATGGGCTGGCTCTTGGCGTCTAAAACTTTTGGAGTGCCACAAGCAACTCTCAGAAGACATGCTTCGAATAGTAACAAAACTTTGGAGTCCAGTGCAAAGGGTCTAGGATCTTGGAAAGCTACTTTTCCACCTGATGTGGAAAGAAAATTAGTTGAGCATTTGAAATTACTTGAATCTCGTTTGTTTGGACTGACGCGAGCTTCTGTTCAAGAATTAGCTTTTAATATGGCTGAAAGAAACGGTTTCGCTCATAGATTTAACCCACAAAAACAGAAAGCTGGACAAGAATGGTTAGAAGGATTTTTAAgacgaaataaagatatttctcTACGCAAACCAGAAGCTACTTCAGCCGCTCGTGCTCAGGCTTTTAATCGGCCACAAGTCAAAAAGTTTTTCGAGATATACGGAAATCTGCTGGAATCTGAAAACATTGGGCCACATCGAATTTATAATGCTGACGAATCAGGCCTGTCTACTGTACAAAAACCCCAAAAGATATTGGCTACTGCTGGCAGGAAGCAAGTTGGCGTAATAACTAGCGCAGAACGTGGAACCAACACcactgttgtttgttgtgttaatgCTGTTGGTACGTTTGTTCCGCCGATGATGATATTTTCgaggaaaaatatgaaaaatgaacTGGTAGATGAAGCACCTCCTGGCACTTTAGGTGTAGCTCAACCATCAGGATGGATGACAACAGATTTATTTCTGAAATGGCTTAAGCACctccaaaattttgttaaatctTCCATTGACGATAAAGTTATATTGATTGTCGACGGGCATGCAAGTCATAAAGGGATTGAAACTTTAGAATACGCGAAACAAAAcggcattattattttgtgtctacCTCCACATTGCACTCATCGCATGCAGCCTTTAGATGTCTCATTTTTCGGGCCCTTAAAGACTTATTTTAACCAAGAGACATCCAAATGGCTAAAACAACACCCAGGACGTGTCGTTACACAGTTTCAGATTGCTGGCCTGTTCAAGGAAGCTTATGGTAAGGCAGCTACAGTGCAAAATGGTTGTAACGGATTTAAAAACACTGGCATTTGGCCTCTAAATCCTGAAATATTTCCCGATTATATGTATGAACCTGCGGAGACTACAAACATACCACTGGAAGACGCCTCCAATGTGcaatgtcatcagcaaatagctCCTAGTCCAGTTCCCGTAGCTGGACCCTCTACACAGCAGTTAGACAATTCAATTTCACTTCCCGTAACGAACCATCTTCAAGCTTCTGAATCTACACAAACTCCACATCAGCAGCAAATATTCCGTGCCGTAACACCTGACAAAAATGATACAGTTCAAACAACCGACTCTACTGAACAAGCTAACAATTCAACAGCAAACACTGATCAAGACCATAATTTATCTGGTCCAAATCAAAATCGCCCATCTGTTGGTAGTAAAGAACGTCCTTCCTCCTATACTCTAGCAGTGCCTATTGAGGATTTATCTCCTGTCCCGAAAGGACGTTACATAAGTGGCCAAGGAAAACGTAAGCCAAAGAAACGACAAACCGCTTTGATTTTGACTCTTACTCCAAACATGAACGCGATCAAGTCAAATAATGAGCCTAAAGCTCCTCCAGAGAAGAGGAGACGAACCGTTACCAAAACCTTTGTAGCGCGTAGGCATATTAAACATCTTTAG
- Protein Sequence
- MPRNYKRKTDRQSWSEESMRKAIEAVLSNKMGWLLASKTFGVPQATLRRHASNSNKTLESSAKGLGSWKATFPPDVERKLVEHLKLLESRLFGLTRASVQELAFNMAERNGFAHRFNPQKQKAGQEWLEGFLRRNKDISLRKPEATSAARAQAFNRPQVKKFFEIYGNLLESENIGPHRIYNADESGLSTVQKPQKILATAGRKQVGVITSAERGTNTTVVCCVNAVGTFVPPMMIFSRKNMKNELVDEAPPGTLGVAQPSGWMTTDLFLKWLKHLQNFVKSSIDDKVILIVDGHASHKGIETLEYAKQNGIIILCLPPHCTHRMQPLDVSFFGPLKTYFNQETSKWLKQHPGRVVTQFQIAGLFKEAYGKAATVQNGCNGFKNTGIWPLNPEIFPDYMYEPAETTNIPLEDASNVQCHQQIAPSPVPVAGPSTQQLDNSISLPVTNHLQASESTQTPHQQQIFRAVTPDKNDTVQTTDSTEQANNSTANTDQDHNLSGPNQNRPSVGSKERPSSYTLAVPIEDLSPVPKGRYISGQGKRKPKKRQTALILTLTPNMNAIKSNNEPKAPPEKRRRTVTKTFVARRHIKHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00408393;
- 90% Identity
- iTF_00373977;
- 80% Identity
- iTF_00373985; iTF_00373986; iTF_00373987; iTF_00373988; iTF_00373989; iTF_00373982; iTF_00373983; iTF_00373984;