Delp002971.1
Basic Information
- Insect
- Deilephila elpenor
- Gene Symbol
- -
- Assembly
- GCA_949752805.1
- Location
- OX457095.1:969885-971771[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-07 0.00015 22.1 0.0 1 38 15 52 15 58 0.91
Sequence Information
- Coding Sequence
- ATGCCACGTAATTATAAGCGTACGACTGATCGTCAATCCTGGAGTGAGGAATCAATGCGTAAAGCCATAGAAGCAGTTCGCAGTAATAAAATGGGCTGGCTTTCGACGTCGAAGACATTTGGAGTCCCACAAGCAACACTAAGAAGACATGCTTCGAATAGTAACAAAACTTTGGAGTCGTCTGCAAAGGGCCTAGGATGTTGGAAAGCTACTTTTACACCTGATGTGGAAAAAAAATTAGTTGAGCATTTGAAATTACTTGAATCTCGTTTGTTTGGACTAACGCGAACGTCTGTTCAAGATTTAGCTTTTGAGTTGGCTGAAAAAAACGGGTTTGCTCACAAATTTAACCCGCAAAAACGTAAAGCTGGACAAGAATGGTTAGAAGGGTTTTTGAGACgaaataaagatatttctttACGAAAACCAGAAGCTACTTCAGCTGCTCGTGCTCAGGCTTTTAATCGACCTCAAGTCAAAAAGTTTTTTGAGATTTACGGACATCTGCTGGAATCTGAGAAAATTGGGCCACACAGAATTTATAATACTGACGAATCAAGCCTGTCTACTGTACAAAAACCCCAAAAGATATTGGCTACTACTAGTAGGAAGCAAGTTGGCGTAATAACTAGCGCAGAACGTGGAACTAACACCACTGTTGTTTGTTGTGTTAATGCTATTGGTACCTATGTTCCGCCGATGATGATATTTTctaggaaaaatatgaaaatggaATTGGTCGATGAAGCACCTCCTGGCACTTTCGGTGTAGCTCAACCATCAGGTTGGATGACAACGGATTTATTTCTGAAATGGCTCAAACACTTTCAAAGTTTTGTTAAATCATCTATTGACGATAAAGTTATATTGATTGTCGACGGGCATGTAAGCCACAAAGGGCTTGAAACTTTAGAATATGCGAAACAAAACGGCATTATTATTCTGTGTCTACCTCCACATTGCACTCATCGTCTCCAGCCTTTGGATGTATCATTTTTCGCGCCTTTGAAGACATATTTCAACCAAGAGACATCCAAATGGCTTAAACAACACCCAGGGCGTGTTGTTACACAATTTCAAATTGCTGGCCTGTTCAAAGAAGCTTATGGTAAGGCAGCTACAGTGCTAAATGGTTGTAACGGATTTAAGAGCACTGGGATTTGGCCTCTAAACCCTGAAATATTTCCCGATTATATGTACGAACCTGCAGAGACAACAAACATACCATTACTGGAAGACACCACCAATATGCAATTTCATGAGCAAGTAGGTCCTATTCCAGTTCCCATAGCAGGACCTTCCACACAACAGTTAGACGATTTAATATCACTTCCTGGAACGACACAACAAATAATCCGCGCCGTAACACCTGACAATAATGACACAACAGTTCAAACAACCGACTCTACTGAACCAGCTATCAATTCAACAGCAAACACTGGTCAAGACCTTATTTTACCTGCTGCAAATCAAAATTGCCCATCTATTGGTAATGAACTACATCCCTCATCCCATACTTTAGCAGTGCCTATTGAAGTTTTCTCTCCTGTCCCCAAAGGACTTTACGTAAGTGGCCAAGGCAAACGTAAGCCAAAGAAACACCAAACCCCTTTAGTTTTGACTTCCACTCCAAATATGAACGAAATTAAGGCAAGAAACGAGCCTAAAGCTCCTTCAGAGAAGAAAAGACGAAAGGTTACCAAAACCATATTCCATGAAGACAGCGAAGAAGAAAATTGGCCAAACTACACTCAAGATGACGAAGAGGATTGCGCATGCATATATTGCAACGATCTTTATTCAAGATCAAAACCTGGAGAAGACTGGTTGCGGTGTTTAAAATGTTCGCATTGGGCCCACGCTTCTTGCGCGGACGTTTCTAAATGA
- Protein Sequence
- MPRNYKRTTDRQSWSEESMRKAIEAVRSNKMGWLSTSKTFGVPQATLRRHASNSNKTLESSAKGLGCWKATFTPDVEKKLVEHLKLLESRLFGLTRTSVQDLAFELAEKNGFAHKFNPQKRKAGQEWLEGFLRRNKDISLRKPEATSAARAQAFNRPQVKKFFEIYGHLLESEKIGPHRIYNTDESSLSTVQKPQKILATTSRKQVGVITSAERGTNTTVVCCVNAIGTYVPPMMIFSRKNMKMELVDEAPPGTFGVAQPSGWMTTDLFLKWLKHFQSFVKSSIDDKVILIVDGHVSHKGLETLEYAKQNGIIILCLPPHCTHRLQPLDVSFFAPLKTYFNQETSKWLKQHPGRVVTQFQIAGLFKEAYGKAATVLNGCNGFKSTGIWPLNPEIFPDYMYEPAETTNIPLLEDTTNMQFHEQVGPIPVPIAGPSTQQLDDLISLPGTTQQIIRAVTPDNNDTTVQTTDSTEPAINSTANTGQDLILPAANQNCPSIGNELHPSSHTLAVPIEVFSPVPKGLYVSGQGKRKPKKHQTPLVLTSTPNMNEIKARNEPKAPSEKKRRKVTKTIFHEDSEEENWPNYTQDDEEDCACIYCNDLYSRSKPGEDWLRCLKCSHWAHASCADVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428936;
- 90% Identity
- iTF_00936481; iTF_00356131; iTF_00356132; iTF_00875247; iTF_00044433; iTF_00044434; iTF_00935668; iTF_00935669; iTF_00408393; iTF_01429873; iTF_00819098; iTF_01429869;
- 80% Identity
- -