Ctib031973.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- bab1
- Assembly
- GCA_963669355.1
- Location
- OY770263.1:313087238-313088485[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-17 3.7e-14 53.6 0.0 1 43 28 71 28 73 0.95 2 2 0.7 6e+02 1.7 1.7 2 25 165 191 164 192 0.71
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAACACAAATCAAAATTTGATGCATCATTTGCGATTTCGTGAACGTGGCCCGCTCAAGTCGTGGCGTCCCGAGACGATGGCCGAGGCGATTTTTAGCGTTTTAAAGGAAGGACTGTCGCTGTCTCAAGCCGCCCGCAAATATGACATTCCATATCCTACGTTCGTTCTATATGCGAATCGAGTTCACAACATGCTTGGACCTTCGATTGACGGTGGAACGGACTTGAGGCCGAAGGGCCGAGGTCGACCGCAACGTATTCTGTTAGGAATTTGGCCCGACGATCATATCAAAGGCGTTATAAAGACTGTAGTATTTAGAGATGCTAAGGACATGAAGGACGAGGGCATGCATTTGGCGTACGGCAGGCACTCGCCTGtttttccatttcaagaagGACAAATGAATTATCCGGGCGCACCTTGCGCAAACGGACTCCCACAACAGCCGCCAGTTTCGGCGGCCGACTCAATGTCGCCGGAAGCAACGGCCGCGGCAGTGGCAGCCGTTGCGCACGGAATTCGGCAGCAAATGCAGATGGCGGCTGCAGCGCAACATCACCCGGACGCACAATCCAATCTCTTCAATTTACCTCCGCATATGCATTCAAATAACGGGGGAATTCCCCTACCCAAACAAAACTCACCTGCATCAAATTCTCAAAGACACGCATCACCATCAATACCGGGCCTCCCGAATCCGGCGGCGCTCGGTATAACCGGAATCCCGGGCCTTCACATCATACCCGGCCTTGGCTCAAACGCTAGTCAGACATCTGCATCCGCCAACTCAATTTACACTTCCAATACGAGTAATCAGCAATCATCAACATTACACACTACATCAGCATCGAGCGGATCGATAAACATTTCGCGAAATAACTCCCCATCAGAGGCTGCCCACGATCTACGTATGAATAGTCCGGACGAGAGTCCGTTGAATTCACCCCTCGAAATGGCGCTGGAGCCAGCGGTTAACCTGGCCGTCGGAGTTAGCGGTATGGCCTATAAGCCGTCACGAGGCTACTCGTCACCGCGACCCGAACACTTATTTCAGGAGGATATTGCCGAATTAGTCGGCACGACATCACGTAACTGTCCATCGAACATGAATTTTAAGGAACCATCGAGCGGCATTAAACTCGAGCCAGTGGCCGAATGTCGATCCGaataa
- Protein Sequence
- MWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIKGVIKTVVFRDAKDMKDEGMHLAYGRHSPVFPFQEGQMNYPGAPCANGLPQQPPVSAADSMSPEATAAAVAAVAHGIRQQMQMAAAAQHHPDAQSNLFNLPPHMHSNNGGIPLPKQNSPASNSQRHASPSIPGLPNPAALGITGIPGLHIIPGLGSNASQTSASANSIYTSNTSNQQSSTLHTTSASSGSINISRNNSPSEAAHDLRMNSPDESPLNSPLEMALEPAVNLAVGVSGMAYKPSRGYSSPRPEHLFQEDIAELVGTTSRNCPSNMNFKEPSSGIKLEPVAECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00203428; iTF_01127238; iTF_00453136; iTF_00628161; iTF_00454437; iTF_01461061; iTF_00937193; iTF_00936465; iTF_00876966; iTF_01430670; iTF_01431752; iTF_01183741; iTF_00717658; iTF_00424575; iTF_01049568; iTF_01043547; iTF_01375647; iTF_01087931;
- 90% Identity
- iTF_00203428;
- 80% Identity
- -