Oorn114899.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- bab1
- Assembly
- GCA_963969285.1
- Location
- OZ017741.1:158694357-158695656[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-16 1.3e-13 53.6 0.0 1 43 28 71 28 73 0.95 2 2 3 1.1e+03 2.5 0.5 1 15 164 178 164 192 0.80
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAATACCAATCAAAATTTGATGCATCACCTGCGGTTTCGAGAGCGAGGGCCGTTGAAATCATGGCGACCTGAAACGATGGCTGAAGCAATATTTAGCGTTCTAAAGGAAGGACTTTCACTTTCTCAAGCTGCTCGAAAATATGACATTCCATATCCAACCTTTGTTTTATATGCGAACCGCGTCCACAATATGCTGGGACCTTCAATTGACGGTGGGACGGACTTGCGACCTAAAGGTCGGGGTAGACCTCAGCGAATACTGCTCGGCATTTGGCCAGATGAGCACATCAAAGGCGTAATAAAGACTGTAGTATTTCGAGATGCGAAAGATTTGAAAGAAGAAGGAATGCACTTATCGTATGGTAGACACTCGcCCGTTTTTCATTTCCAAGAAGGACAGATTAACTATCCGGGGGCAACATGTGCAAATGGTCTTCCCCAACAACATGCGTCATCAAATACGGAAACAATGACTCCAGAAGCGACAGCCGCTGCAGTGGCGGCTGTGGCGCATGGTATCAGACAACAAATGCAAATGGTAGCAGCTGCCCAACATCATCCTGACGCGCAAACACAAGGACTTTTCAATTTACCGCCGCATATGCATCCAAATAATGGAGGGGTGTCGGTTCCCAAGCAAAACTCTCCCGCACCAAATTCTCAGCGGTTAACGTCACCGTCAATGTCTGGTCTTCCAAACTCAGCCAGTATGAATATGACGGGTATGCCTGTGATGCATGTAATGCCTGGGATGGGTTCCAACGTGAGCGGACAGACTAGTGGATCAGCAAATGCGCCGTATGGTTCTAATACTAGTAGTCAACAGTCTGCATCGACTCTGCATACTTCCGCGCAAATCGGATCCACCAATATTTCGCGGAATAACTCTCCAACTGACACAGCCCACGATCTACGCATGAACAGTCCAGATGAAAGTCCGCTCAATTCACCTCTTGGACTATCTTTGGAACCAGCTGTGAACCTTGCAGTTGGCGTGAGCGGGATGACATATAAACCCTCTCGAGGATACTCGTCTCCACGTCCTGAACATCTATTTCAAGAGGACATAGCAGATCTGGTTGGGAGGACATCACGCACGCCAGGTATGAACAACTTCAAAGATCCTTCGAGCAGTATCAAAGTAGAGCCGGTGGCTGAGTGTCGATCTGAGTAA
- Protein Sequence
- MWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDLKEEGMHLSYGRHSPVFHFQEGQINYPGATCANGLPQQHASSNTETMTPEATAAAVAAVAHGIRQQMQMVAAAQHHPDAQTQGLFNLPPHMHPNNGGVSVPKQNSPAPNSQRLTSPSMSGLPNSASMNMTGMPVMHVMPGMGSNVSGQTSGSANAPYGSNTSSQQSASTLHTSAQIGSTNISRNNSPTDTAHDLRMNSPDESPLNSPLGLSLEPAVNLAVGVSGMTYKPSRGYSSPRPEHLFQEDIADLVGRTSRTPGMNNFKDPSSSIKVEPVAECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00324239;
- 90% Identity
- -
- 80% Identity
- -