Tuni042315.1
Basic Information
- Insect
- Thereva unica
- Gene Symbol
- bab1
- Assembly
- GCA_949987705.1
- Location
- OX465282.1:167515008-167516304[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-17 6e-14 53.5 0.0 1 43 28 71 28 73 0.95 2 2 1.3 9.3e+02 1.7 0.2 2 15 165 178 164 183 0.85
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAATACAAATCAGAACTTGATGCACCATTTAAGATTTCGAGAGCGAGGGCCTCTGAAATCTTGGCGTCCCGAAACAATGGCGGAGGCAATTTTTAGTGTATTAAAAGAAGGTCTGTCACTGTCACAAGCTGCCCGAAAATATGACATTCCATACCCAACGTTTGTTCTCTATGCAAATCGAGTTCATAATATGCTAGGACCTTCAATTGACGGTGGAACTGATTTACGACCAAAAGGAAGAGGCAGGCCGCAACGCATATTGTTAGGAATTTGGCCAGATGAGCACATCAAGGGTGTCATTAAAACTGTAGTGTTCCGAGACGCCAAAGAGTTAAAAGAAGAGGGGATGCAACTTTCTTACGGGAGACACTCGCCTGTTTTTCCATTTCAAGAAGGATCATTGAACTATGCGGGTGCACCATGCACAAACGGACTACCACCTCAACCTAACGTATCCGTTTCGGACTCTATGTCTCCAGAAGCAACGGCAGCAGCGGTAGCTGCTGTAGCACATGGTATACGACAGCAAATGCAGATGGCAGCAGCAGTTCATCATCCAGACGCAGCGTCTAATATATTTAACCTTCCGGCTCATTTGCATTCAAATAACGGAGGCATAACACTACCAAAGCAAAACTCACCAGCATCCAGTGTACAAGCAAACACAAACCAACATAACCAGCACAACCAACAGCGGCATGCATCACCATCAATACCAGGTCTTCCGAATCATGCTGCGCTAGGCCTGCCTGGACTTCCCGGTATGCACTTCGTATCCGGCCTCAATCCCAACACTAGTCAGGCGGCCGCTGCGGTGAGCTCAGCATCATATTCTTCCAATGTTAGTAACCATCATACAACAGTTGCGCCGGCACACATGGCTCTTAGCACCTCTGCGTCCAATGTCCCATCCAATATTTCTCGTAATGACTCACCGCCAGAATCAGCGCACGATTTACGAATGAACAGCCCCGAGGAGAGCCCTTTAAATTCGCCACTTGACATGCCACTTGAACCTGCTGTTAATTTAGCGGTGGGTGTTAGTGGGATGGCATACAAACCATCTCGAGGTTATTCATCACCTCGCCCTGAACACCTATTCCAGGAAGATATTGCCGATCTGGTTGGTAATCCATCTCGTAACTGTCCACCGAACATGAACACCTTTAAAGAACCTCCACCAGGAATTAAGATCGAGCCGATGACAGAGTGCCGTAGCGAGTAA
- Protein Sequence
- MWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKEEGMQLSYGRHSPVFPFQEGSLNYAGAPCTNGLPPQPNVSVSDSMSPEATAAAVAAVAHGIRQQMQMAAAVHHPDAASNIFNLPAHLHSNNGGITLPKQNSPASSVQANTNQHNQHNQQRHASPSIPGLPNHAALGLPGLPGMHFVSGLNPNTSQAAAAVSSASYSSNVSNHHTTVAPAHMALSTSASNVPSNISRNDSPPESAHDLRMNSPEESPLNSPLDMPLEPAVNLAVGVSGMAYKPSRGYSSPRPEHLFQEDIADLVGNPSRNCPPNMNTFKEPPPGIKIEPMTECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00324239;
- 90% Identity
- iTF_01430670;
- 80% Identity
- -