Mrus011488.1
Basic Information
- Insect
- Machimus rusticus
- Gene Symbol
- bab1
- Assembly
- GCA_951509405.1
- Location
- OX608050.1:24078735-24080030[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-17 3.4e-14 53.5 0.0 1 43 28 71 28 73 0.95 2 2 0.47 4.6e+02 1.8 1.1 1 15 164 178 164 190 0.81
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACAAACCAGAACTTGATGCACCACCTGAGATTTCGGGAACGCGGCCCACTGAAATCGTGGCGGCCAGAGACCATGGCGGAGGCGATCTTCAGCGTCCTGAAGGAGGGACTCTCGCTGTCGCAGGCCGCCCGGAAGTACGACATTCCATACCCGACGTTCGTCCTCTACGCGAATCGCGTCCACAACATGCTGGGGCCCTCGATCGACGGCGGCACCGACCTCCGGCCGAAGGGCAGAGGCCGGCCGCAGCGCATCCTCCTCGGGATTTGGCCGGACGAGCACATCAAGGGCGTGATCAAGACTGTCGTCTTCCGGGACGCGAAGGAGCTGAAGGACGACAGTATGCACTTATCGTACGGTAGACACTCGcctgtttttcCATTTCAAGAAGGAGCAATGAATTACCCCGGAGCCCCATGTTCGAACGGACTCCCCAACCAGCCGGCCGCGTCTGTCGCTGACTCAATGACGCCGGAAGCGACTGCAGCAGCGGTTGCCGCCGTCGCCCATGGCATCCGGCAGCAAATGCAAATGGCGGCGGCCGCACAACAGCAGCATCACACAGACGCCGCCTCGAACATCTTCAACCTTCCGGCCCACATGCAGCATTCGGGAAACGCCGGAGTGCCCCTACCAAAGCAAAATTCACCGGCGTCTGGCGGCCAGATGAACACAAACCAGCAGAGGCACACCTCACCCTCCATACCTGGTCTTCCGAACCCCGCAGCCCTGGGGCTCCCCGGAATCCCGAACATGCACATGGTGCCCGGCCTCAATTCTAGTTCTAGTCAGGCAGCGGTCTCCTCGGCTAGCTCCATTTCGCATTCTTCCAGCGCTGGCAGCCATCAGACGACAGTGACGCCGGCGCACCTATCCCTGAACACGTCGACCGGGAGTGCGCAGTCGAACGTGTCCCGGATCGAGTCCCCGTCGGAGTCGGCGCACGATCTACGCATGAACAGCCCCGAAGAGAGCCCCCTAAACTCGCCCCTGGGCATCCCCATGGAGCCGGCTGTCAATCTAGCGGTAGGTGTCAGTGGAATGGCCTACAAACCCTCCCGAGGCTACTCATCCCCTCGACCTGAACACCTCTTCCAGGAAGACATCGCCGACCTGGTCGGGAACACCTCCCGCAACTGTCCACCGAACATGAGCACCTTCAAGGAGCCCCCGTCAGGGATTAAAATCGAACCGATGGCCGAGTGCCGCAGCGAGTAA
- Protein Sequence
- MWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKDDSMHLSYGRHSPVFPFQEGAMNYPGAPCSNGLPNQPAASVADSMTPEATAAAVAAVAHGIRQQMQMAAAAQQQHHTDAASNIFNLPAHMQHSGNAGVPLPKQNSPASGGQMNTNQQRHTSPSIPGLPNPAALGLPGIPNMHMVPGLNSSSSQAAVSSASSISHSSSAGSHQTTVTPAHLSLNTSTGSAQSNVSRIESPSESAHDLRMNSPEESPLNSPLGIPMEPAVNLAVGVSGMAYKPSRGYSSPRPEHLFQEDIADLVGNTSRNCPPNMSTFKEPPSGIKIEPMAECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00324239;
- 90% Identity
- iTF_00424575;
- 80% Identity
- -