Cv-a015280.1
Basic Information
- Insect
- Chloroclystis v-ata
- Gene Symbol
- e2f7
- Assembly
- GCA_963691955.1
- Location
- OY829905.1:13323065-13324253[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-22 1e-18 67.2 0.0 1 65 53 119 53 119 0.94 2 3 0.98 5.9e+03 -2.5 0.0 11 29 125 142 124 144 0.73 3 3 7.8e-17 4.7e-13 49.1 0.1 1 61 154 235 154 245 0.90
Sequence Information
- Coding Sequence
- ATGTACGAAGATGACAACATAACTTGTACTCCTAAGCGTTGTGTTCTTACTGAAGTCACCAATTCGTCGAGCTATGTGTCGCCGAATGCTAACCTCAAGCTCCTCACAAATGTCGCACTCCAGTACCCTACACCGCCGCCGAGTGCGGTGCAACGTAAGGAAAAATCACTGCAGATACTATGCGATAGATTTCTCCATCTTTACCCATTACATGGGAATGTTCCCATGGAGATACAGTTAGATACAACTGCAGCCAGCCTTGGTGTGGAGAAGCGAAGGATgtatgatataattaatatattggaAGCAATGCAATGTGCAGTccataaaagaaaaaatacttacctttGGCATGGAGGGTCTCGTTTAAATGGTTTTCTTAAAATGTTGAAGAAGCAAggagaaaatttaaaactcTCAGAAGTACTTCGTGGCAGAGCCCCAAAGCCACCCACACCAAAACACAAAACTTTAGGTGTGCTTGCCCAGAGATTTCTTATGTTGTTTCTGGTTGAACCCCAtAATACTTTAATAAACTTGGAAATGGCTGTAAGAGTCCTCATAGACACTACAAACAAGAGTAAGACAGTGTTATCACCAGAACAACAAGAACGCCAACACAAATCAAAAGTGAGGAGGCTGTATGATATTgccaatgtttttatttctattggtCTCATTGAAAAGGTTTCTGGAAATTCAATATTGAAGAAGCcagtatttatgtatgtagggCCATTCAAACCCAAGACTGTGGATAAATTGATGGTAGCTACTCCATCTCCTATTACACCACTGGCTGTCCTAGACAGCCAACATAGAGCTTCATCATGTCAAGTGTTTGCGGGGAAATCCAAGAGAAAGCTGGAGTTTACCACTCCAACACATTCTCGGGATCAAAAACTAGGTATCACAACCCCACCGCACACCCCGTCTCACAAGTGGGATGAAATCTTGCTTGTGGCTGACATGGAACTGACTAGAATTAACAATGGTGTTATgttgtga
- Protein Sequence
- MYEDDNITCTPKRCVLTEVTNSSSYVSPNANLKLLTNVALQYPTPPPSAVQRKEKSLQILCDRFLHLYPLHGNVPMEIQLDTTAASLGVEKRRMYDIINILEAMQCAVHKRKNTYLWHGGSRLNGFLKMLKKQGENLKLSEVLRGRAPKPPTPKHKTLGVLAQRFLMLFLVEPHNTLINLEMAVRVLIDTTNKSKTVLSPEQQERQHKSKVRRLYDIANVFISIGLIEKVSGNSILKKPVFMYVGPFKPKTVDKLMVATPSPITPLAVLDSQHRASSCQVFAGKSKRKLEFTTPTHSRDQKLGITTPPHTPSHKWDEILLVADMELTRINNGVML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00967840;
- 90% Identity
- iTF_01335720; iTF_00810788; iTF_00406501; iTF_00696293; iTF_00704742; iTF_01528071; iTF_00119400; iTF_00856393; iTF_00632554; iTF_00638442; iTF_00662026; iTF_01428842; iTF_00698061; iTF_00661070; iTF_00737264; iTF_00686129; iTF_00703729; iTF_00705777; iTF_00699890; iTF_01161108; iTF_01171255; iTF_01170360; iTF_01219576; iTF_00698969; iTF_00700794; iTF_00702683; iTF_00361404; iTF_01528988; iTF_00376893; iTF_00662877; iTF_00697117; iTF_00407358; iTF_01182462; iTF_00266976; iTF_00701748; iTF_01099671; iTF_01509374;
- 80% Identity
- -