Prec007950.1
Basic Information
- Insect
- Pasiphila rectangulata
- Gene Symbol
- e2f7
- Assembly
- GCA_963082625.1
- Location
- OY720239.1:14735253-14736431[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.9e-23 8e-19 68.3 0.0 1 65 53 119 53 119 0.93 2 3 2.6 2.6e+04 -3.8 0.0 12 28 126 141 125 143 0.63 3 3 1.9e-17 1.9e-13 51.0 0.2 1 64 154 244 154 245 0.89
Sequence Information
- Coding Sequence
- ATGTATGAAGATGACAACATAACTTGTACTCCTAAGCGCTGCGTGCTCACTGAGGTCACCAACTCGTCCAGCTATGTGTCGCCGAATGCTAACCTCAAGCTCCTCACTAATGTCGCACTTCAGTACCCAACACCGCCCCCGAGTGCGGTGCAACGCAAAGAAAAATCTCTGCAAATATTATGCGATAGATTCCTCCAGCTTTATCCATTGCATGGGAATGGCATGGTGGAAATACAACTGGACACTACTGCAGCCAGCCTTGGCGTGGAGAAACGACGAATGTACGACATAATCAACATATTGGAAGCTATGCAATGTGCAGTACATAAGAGAAAAAACACTTATCTTTGGCATGGAGGGTCCCGATTGAATGGTTTTCTCAAAATGTTGAAGAAACAAGGAGAAAATTTAAAGCTTTCAGATGTCCTTCGTGGCAGAGCCCCAAAGCCACCAACACCAAAACACAAAACATTAGGAGTCTTGGCTCAGAGATTCCTAATGCTGTTTTTGGTGGAACCACAAAATACTTTAATAAACCTGAATATGGCTGTGAGAGTCCTCATTGACACTACCAACAAGAGCAAGACAGTGTTGTCTCCAGAGCAACTAGAACGCCAGCACAAGTCAAAAGTGAGGAGGCTTTATGATATAGccaatgtatttatttctattggTCTCATTGAAAAGGTTTCtggtaatttaatattaaagaaGCCAGTATTTAAGTATGTAGGGCCATACAAACCCAAAAAGGCTGATAAAGTGACGGTAGCTACTCCATCTCCGATCACACCCCTTGCGGTTCTTGATAGTCAACCGAGAGCTTCATCATGTCAAGTGTTTGCAGGCAAGTCCAAGCGGAAATTGGAGTTCAGCACTCCTACAAGTTCCCGGGAACTACAGCTTGGGATCACAACCCCGCCGCACACCCCGTCCCACAAGTGGGATGAGATCCTGCTTGTGGCAGACATGGAACTGACTAGAATTAACAATGGTGTTATgttgtga
- Protein Sequence
- MYEDDNITCTPKRCVLTEVTNSSSYVSPNANLKLLTNVALQYPTPPPSAVQRKEKSLQILCDRFLQLYPLHGNGMVEIQLDTTAASLGVEKRRMYDIINILEAMQCAVHKRKNTYLWHGGSRLNGFLKMLKKQGENLKLSDVLRGRAPKPPTPKHKTLGVLAQRFLMLFLVEPQNTLINLNMAVRVLIDTTNKSKTVLSPEQLERQHKSKVRRLYDIANVFISIGLIEKVSGNLILKKPVFKYVGPYKPKKADKVTVATPSPITPLAVLDSQPRASSCQVFAGKSKRKLEFSTPTSSRELQLGITTPPHTPSHKWDEILLVADMELTRINNGVML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00967840;
- 90% Identity
- iTF_00321388;
- 80% Identity
- -