Basic Information

Insect: Chilo suppressalis
Gene Symbol: retn
Assembly: None
Location: chr19:12226874-12372005[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-26 3.9e-23 81.4 0.0 1 89 203 289 203 289 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-26	3.9e-23	81.4	0.0	1	89	203	289	203	289	0.96

Sequence Information

Coding Sequence: ATGGCGGACGCCGACCGCGATTCGGACCTTGGCGATGACAGCCCAGTGTCCGCGCGGTCAGAAGGGGAGTCTTCAGGGGAGCAATCTTGCGAGAGCTCAGACGAGGGGGTGGGTCGGGACGCGCCCGCTCCCCTCCAGCACCCGCCCAACCAGCCGCACCCACATCAACCCCATCAGCCTCACCAGTCGCCCCAACTACACCAGCATAATATGAACCATCACCCGGTTGTGACGCACCCATCACTCGGCAACCACCAACTCAATCACCATCCGAGGAATTCGCCTAGACCGCATGAAAGGGAACTCAAAGTTCGTGATGACTTCGAGTCCCTGAAATCGTCACTCCACCCGCACCTCTCTTCGCTGGCGTCGTTGGCCCAAGGCGCGCCCCTTTCGACGCCAAGCAGCGTGTTCGCGTTGGCCGGTGCGGGGCCAACGGGAGGGTTTCCGTACGCCCCGCCGGCCTTTCTGGCCCCAGCGCCGCCACCACCGGCTCAACCTGCTGGGTCAGCGTCGTCATCATCGTCAGAGGGCAGCGCGGCGGGATGGAGCTTCGAAGAACAGTACAAGCAGGTCCGTCAGTTGTACGAAATCAGTGACGATCCACAGAGGAAGGAATTCCTCGACGATTTGTTCTCCTTCATGCAGAAGCGAGGAACTCCTATCAACAGATTACCGATCATGGCCAAGTCTGTTCTGGACCTCTACGAGTTGTACAACCTGGTGATCGCACGCGGGGGCCTTGTAGAGGTCATAAACAAGAAGCTCTGGCAGGAAATCATCAAGGGCCTCAGACTGCCTTCTTCCATCACATCTGCTGCCTTCACACTTCGCACACAGTATATGAAATACCTGTACGACTATGAGTGCGAGAAGAAGAATCTCTCTACAAGGAGTGAGTTGGATGCTGCCATAGAAGGAAACAAAAGGGAAGGTAGACGCGCTTCGGGACAGTACGACGCACAAGCGGCTTTAGCTATGCATTCCTTCCAGCCCCCGCTGAACCGCGTGCCGGCGTCGCTCGCGCAGCTGTCCCAGCACATGCAGCCGCTGTCTCTTTCCCTCGCGGGCGTGGGAGGAGTTCCGCGGCTCCCCCCGCTGCCTCCACACGCCCCTCATCTTTCGCAACACGACCTCGAGTACCGCGTGCGAGAGTACATGAAGATGATACAGCAACAACGAGAGCTTATGAGGAACGGTTCAGAATCCCCGCCCGGCTCGAACGCGCCCGCGCCCATAATGTCGCCGCGCGACGCCGCCGCCCTCAGTGCCATCGACGTGTCCCGCTTGACTCTGTGGTCCCTATACAACAATAACAACAACAACAGTCCACAGCCAGAACTAGAGCCACAACGGTACGTGTCTAGCGAGGCGTTAAACCTCAGCGAGAGCCCCAATTCGAGCGGCAGTGGCGGCAAGCGCGAGGCGTGCAGATCCCCCCCGCCGCCCGCCAAGCGCCGCACGCCACGCCCCCCCTCCCCCGCCGTCCGCCCCGAGCCCGCGCACCCCCACCACGTGTCCGAGCCGCGCTGCCCACCGCCCGCGCAGCTCAACGGCGCGCCACCGCCCAACGGCGTTAACGGCGCCGCCTTCAAGATCACCACCAGGGGTGATGCAAGCACAGGCGACCAGCAACTAGTCGTCTCGATAGAGCTGAACGGTGTGACATACGAAGGTGTCTTATTCCCATCACAGAACGGGAACGGACAGAACGGTCACAGGCAAATGGTGTCTTAA
Protein Sequence: MADADRDSDLGDDSPVSARSEGESSGEQSCESSDEGVGRDAPAPLQHPPNQPHPHQPHQPHQSPQLHQHNMNHHPVVTHPSLGNHQLNHHPRNSPRPHERELKVRDDFESLKSSLHPHLSSLASLAQGAPLSTPSSVFALAGAGPTGGFPYAPPAFLAPAPPPPAQPAGSASSSSSEGSAAGWSFEEQYKQVRQLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMHSFQPPLNRVPASLAQLSQHMQPLSLSLAGVGGVPRLPPLPPHAPHLSQHDLEYRVREYMKMIQQQRELMRNGSESPPGSNAPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPELEPQRYVSSEALNLSESPNSSGSGGKREACRSPPPPAKRRTPRPPSPAVRPEPAHPHHVSEPRCPPPAQLNGAPPPNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01153635; iTF_01206311; iTF_01561800; iTF_01193394; iTF_00358300; iTF_01205483; iTF_00780048; iTF_01144339; iTF_01149355; iTF_00827764; iTF_01312021; iTF_00235654; iTF_00432914; iTF_00113915; iTF_01362872; iTF_01487494; iTF_01151004; iTF_01506947; iTF_01506121; iTF_00843284; iTF_00953300; iTF_00819839;
90% Identity: -
80% Identity: -