Zces000865.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- retn
- Assembly
- GCA_012273895.1
- Location
- CM022616.1:3029189-3128538[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-26 3.9e-23 81.5 0.0 1 89 185 271 185 271 0.96
Sequence Information
- Coding Sequence
- ATGGCCGACGCCGACCGCGATTCAGATCTTGGTGACGACAGCCCCGTGTCAGCCAGATCAGAAGGCGAGTCATCAGGAGAGCAGTCCTGCGAGAGCTCTGACGAGGGTGTAGGCCGTGACGTCAGCATTCCGCAGCACCACCAGCCGATGCCGCACCAGCATAATCTCACCCACCACGCCGCCATGAACCACCAGCAGATGAACCAGTTGAACCACCCTCACCAGAGGAACTCGCCGAGACCTCTGGAGAGGGAAATTAAGGTCCGTGATGACTTCGAATCACTGAAGACGTCTCTCCACCCGCACCTATCATCGCTGGCTTCTCTGGCCCAGGGTGCTCCACTATCGACGCCTAACAGCGTGTTTGCGCTTGCGGGCGGAGGCCCGGGCTTCCCTTACGCGCCGCCAGCGTTCCTCGCCCCAGCGCCTCCGCCCCCCGCCCAGCCGGCAGGATCAGCGTCATCTTCCTCATCCGAAGGAAGTGCCGCTGGGTGGAGCTTTGAAGAACAGTACAAGCAGGTCCGTCAGTTGTATGAAATCAGCGATGACCCCCAGAGGAAGGAGTTCCTAGACGATTTGTTTTCGTTCATGCAGAAGAGAGGAACACCAATCAACCGACTGCCAATAATGGCCAAGTCAGTGTTGGACCTGTACGAGCTGTACAACCTGGTGATAGCGCGAGGCGGCCTGGTGGAGGTGATCAATAAGAAGCTGTGGCAGGAGATCATCAAGGGACTACGGCTGCCGTCGTCCATCACCTCTGCGGCCTTCACTTTACGGACCCAATACATGAAGTACTTATATGACTACGAGTGCGAGAAGAAGAATCTGTCAACCAGAAGTGAGTTGGACGCGGCCATAGAGGGCAACAAGCGGGAGGGGCGCCGCGCCTCCGGCCAGTATGACGCCCAGGCGGCATTGTCTATGCCGTCATTAAACCGCGGCGTGCCGGCGTCCCTCGCGCAGCTGTCGCACATGCAGCCCCTCTCCCTCTCCCTGGGGGGCGTGCCGCGCTTGCCGCCGCTGCCGCACGCGCCGCACGTGCAGCACGACATCGAGTACCGAGTCCGAGAGTATATGAAGATGATACAGCAACAACGCGAGCTTATAAGGAATGGTTCAGAGTCTCCCCCCGGCGCCCCGATGGTCTCGCCCCGCGACGCGGCGCTGTCCGCCATCGACGTGTCGCGCTTGACCCTCTGGTCTCtgtacaacaacaacaacaacagccCACAACCTGACCTCGAACCGCAACGAGAGGCGCTGAACCTGAGCGAGAGCCCGAACTCGACTAACGGCGTGAAGCGCGAGGCGTGCCGCTCGCCCCCCCCGCCGGCCAAGCGCCGCACGCCGCGCCCCCCCTCGCCCCGCTCGCCCCGCTCCGCGCTCTCGCCCCGCTCCCCGCGCTCCCCGCGCTCGCCCCGCTCCCCCCGCTCGCCCGCGCGCGACGACAAGCACGCGCACCTCAACGGTGCGGCGAACGGCGTGAGCGGCGCCGCGTTTAAGATCACTACGAGAGgTGACGCAAGCACTGGCGACCAGAAACTGGTAGTATCCATAGAGCTCAACGGTGTCACATACGAAGGAGTACTATTCCCGTCGCAAAACGGGAACGGCCAGAGCAACCATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MADADRDSDLGDDSPVSARSEGESSGEQSCESSDEGVGRDVSIPQHHQPMPHQHNLTHHAAMNHQQMNQLNHPHQRNSPRPLEREIKVRDDFESLKTSLHPHLSSLASLAQGAPLSTPNSVFALAGGGPGFPYAPPAFLAPAPPPPAQPAGSASSSSSEGSAAGWSFEEQYKQVRQLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPSLNRGVPASLAQLSHMQPLSLSLGGVPRLPPLPHAPHVQHDIEYRVREYMKMIQQQRELIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSTNGVKREACRSPPPPAKRRTPRPPSPRSPRSALSPRSPRSPRSPRSPRSPARDDKHAHLNGAANGVSGAAFKITTRGDASTGDQKLVVSIELNGVTYEGVLFPSQNGNGQSNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00318670;
- 90% Identity
- iTF_00358300;
- 80% Identity
- -