Ayam003381.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- retn
- Assembly
- None
- Location
- AY:1220019-1447964[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.92 2.2e+03 -1.2 0.0 23 39 75 91 63 96 0.76 2 2 1.6e-26 3.9e-23 81.4 0.0 1 89 205 291 205 291 0.96
Sequence Information
- Coding Sequence
- ATGGCCGACGCCGACCGTGATTCGGACCTCGGCGACGACAGTCCCGTGTCCGCACGTTCTGAAGGCGAATCGTCTGGGGAGCAGTCCTGCGAGAGTTCCGACGAAGGCGTCGGCCGGGACGCTCCCACCAACCTTCAGGGTCATCAGCCCCATCAGCCCTTACAACAGCATCAGGCGCTGCCGCCTCATCAGCCTCATCAACCTCAGCTCAGCATGGGCCTGCACCCGTCAGTCGGACACCAACAAATAAACACTCACCAGATGACACATCAACATCAGAGAAACTCGCCAAGACCGCTTGAAAGGGAATTGAAAGTACGAGATGAATTCGAATCTCTGAAGTCATCGTTGCACCCGCACTTATCGTCGTTGGCCTCACTTGCCCAAGGAGCTCCGTTGTCAACATCAAGCGGTGTGTTTGCACTAGCCGGGGCAGGAACCACTGGGGGTTTTCCATACGCGCCCCCTGCGTTCCTAGCACCAGCTCCACCGCCACCGGCGCAACCGGTTGGTTCTGCTTCATCTTCCTCATCAGAAGGCAGTGCCGCAGGCTGGAGCTTCGAAGAACAGTATAAGCAGGTCCGCCAGTTATATGAGATCAGTGACGATCCACAGAGGAAAGAGTTCCTCGATGACTTGTTCTCATTCATGCAGAAACGTGGTACACCTATAAACCGGTTACCGATAATGGCCAAGTCGGTGTTAGATTTATACGAGCTGTATAACTTGGTGATCGCAAGGGGAGGACTCGTCGAGGTCATCAATAAGAAGTTGTGGCAGGAGATCATCAAGGGCCTCAGATTGCCGTCGTCTATTACGTCTGCTGCCTTCACATTACGCACACAGTATATGAAGTATCTATATGATTACGAATGTGAGAAGAAGAACTTGTCGACTCGCAGCGAGTTGGACGCCGCTATAGAAGGCAACAAACGCGAAGGGCGACGCGCTTCCGGACAGTACGACGCACAGGCGGCTCTTGCTATGCCGCCTCTCAGTCGCGGAGTACCTGCTTCTTTGGCCCAGCTCTCTCAGCACATGCAGCCGTTGTCCCTGTCGCTGGGCGGCGGAGTGGCGGGAGTACCTCGCCTACCACCGCTACCACAACACGGGCCACACATCTCCCAGCACGATATCGAATACCGTGTTAGAGAGTACATGAAGATGATACAGCAACAACGGGAGCTTATGAGAAACGGATCGGAATCACCGCCAGGCAGTAACGGGCCCACGTCGATGATGTCGCCGCGTGACGCCGCTGCACTGAGCGCTATCGACGTGTCCCGCCTCACTCTCTGGTCTCTCTACAACAATAACAACAACAGCAGCCCTCAGCCAGACCTCGAGCCGCAACGGTATGACTCCTTTTTTACCCGCCTGCAGCTCAACCATAACGGAGGAGAGGCTTTAAATTTGAGCGAAAGTCCTAACTCGAGTATGAGTGGTGGCAAACGCGAGGCATGTCGTTCGCCTCCGCCGCCGGCGAAGCGCCGCACGCCGCGACCACCCTCCCCGCGCCCGCACACGCCGCACTCGCCTCCGCGCGCGCCCCCCGTCTCGCAGCCCCAGCTCAACGGCACACCCAACGGCGTCAACGGAGCCGCTTTCAAAATTACTACCAGAGGCGACGCGAGCACAGGCGATCAGCAGCTGGTCGTATCGATAGAACTAAACGGAGTCACATACGAAGGTGTACTGTTCCCATCACAAAACGCTAACGGTCAGAATGGTCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MADADRDSDLGDDSPVSARSEGESSGEQSCESSDEGVGRDAPTNLQGHQPHQPLQQHQALPPHQPHQPQLSMGLHPSVGHQQINTHQMTHQHQRNSPRPLERELKVRDEFESLKSSLHPHLSSLASLAQGAPLSTSSGVFALAGAGTTGGFPYAPPAFLAPAPPPPAQPVGSASSSSSEGSAAGWSFEEQYKQVRQLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPQHGPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPTSMMSPRDAAALSAIDVSRLTLWSLYNNNNNSSPQPDLEPQRYDSFFTRLQLNHNGGEALNLSESPNSSMSGGKREACRSPPPPAKRRTPRPPSPRPHTPHSPPRAPPVSQPQLNGTPNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNANGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00318670;
- 90% Identity
- -
- 80% Identity
- -