Basic Information

Insect: Chalcosyrphus nemorum
Gene Symbol: ttk
Assembly: GCA_949716465.1
Location: OX454334.1:13060706-13068681[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-18 1.7e-15 56.6 0.0 2 45 582 626 581 626 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-18	1.7e-15	56.6	0.0	2	45	582	626	581	626	0.96

Sequence Information

Coding Sequence: ATGTCCGTGCAGCAATTCTGTTTGCGGTGGAACAACCACCAGCCGAATTTTATTTCGGTATGTTCCTCGCTGCTGCACAATGGGACGCTGGTGGATGTTACCCTAGCGGCTGAAGGACGACAGCTACAGGCGCACAAAATTGTTTTGTCCGCATGCAGTTCGTATTTTCAGacTCTCTTTACAACGAATCCATGTCAACATCCAATTGTCATACTAAAGGACGTCCAGTACGATGACCTCAAGACAATGGTTGATTTTATGTACTACGGCGAGGTAAATGTGTCGCAAGAGCAATTGCCGCACATCCTCAAAACGGCTGAGATGCTTAAAATCAAAGGCTTAGCCGAGATGCCCACCGATGCGGCGACTCTAACAAAATCGGACAGTAAATCATCATCAGAACAACCTGATCAACTGCAGAGCAGTGGTAGCGGGACCGATTCACTATGGGGTAGTTCCGAGTCACAATTccaacagcaacaaccgcagcaacatcatcaccatcatcatcatcagcaaagtCAAACGCAACAACTGCATCAGTTAAGGAGAACACCCTCGCCATTGGGCGCTGGCACATCACCGGCCACACGAAGGAAACGACTAAGAAAGTCCTCAAATAATGGTTCCGGTGATCGGACTTCAGATGAACATGGCGTTGTCGATACAGGAgctaatatcaatttatccCAAATGAGTCAAATGTCATTTGGTGGCAATACAACTGGTCTCGGACATACCCTACATACGAAAATCATAAAGGAGTCCACAAGTGTTGATGTTGAAGCACATCAGCAAGACTCTTCACCGGATAGCTTGGACGATGGTCATGGCCATCCCCATACTATGCAAATCaAACCCGAAACGGATATGAGTGTTCCGCAGACCCTGCCATTGGATATTTCTGGAGGAACAACTCCTTCGGAGCATGATGGTCCAAATGCTAGTTGCTCCCAGTCACAGTCATCGCACTCAGGTCTGCAATGGACGGTCGTTGATTCAAATTATTCCCGATTTTCGCTGTCATCTTGTCAGGCCAATTTGATTGGCAATGGCAACACCAACAATCCCAATAATCCAAACGGCAATGCCGGATTGAGTAATCAATCAGCCAACAACCAGAGCAACAATGGAAATCAAAATCCAGGTGatcaccagcaacaacaacaacaacaacaacaacagcagcagcagcagcatcggcAACAACAGCAAAACGCAACCAATTCAAATGGCAATTCCAGTGCAGCCGGCggaggcggtggcggcggcggcggaggaaGTGGTCTTGGCAATCCGCAGCAACAACAAGGTCATATTCAAATGCACTACCAGAACTCGACGTACTCGCCGCAAATAATTTCCGTCAATAGTCTGGTGGGCAGCTACTCGCAGAATCTGTCGACTCCAACGTCCCCAAATGAGTCGGCCATGGTGCAATCAGTGTACAGTCAGGGTCCGACACCAACGCAATCGCCAGTCCATCAAATGAACACTGTTCCGACGGGACTAACGTCTGCTGGCGGAGCTGGAGGTCCCGGCACTGGAAATGGTGCGAGTAGTAGTGGTGGATCGAATAATGCTGGCAATGGTGCGTCTCTCGGTGGAAGTGGCGGTGGTACCAGTGTAGTCAACACTTCGGGTAATAATGCCACAGGTGTTGGCAGCAATAATCCAGTCCAATCTGGAAATCAAACAACACAAACGACAACAAAACGTAAACGTTCAGTAAATCCACAAGGCGATGAGAACTTTATTCGAGCTCTCGAAGCCGTACGATCTGGTGGCATTGGCTTTTGTAAGGCAGCTCGCCTCTATGGCGTAAACAATCGTACATTATGGTTAGAATATAAAAAACGCGGCTATCCGATCAGTCGGCCAAGTATTAAGAGTCGAGTGGTAAAGCAGGAGAATCTATCCCCATCGCCGACGCCCACTAACGAGGAGACAACCATCGAGAACTATGAACACATCAACCAGTCAGCTATTAATATGCAAGTTCCTCCCACATCGGACACACCAACGCCACTCATGTGCACTCCGCACACCCACCCTATGGGCGTGATGGGCTTCCTCGACACACGACATATGGAATTCCCCACCAGCATACACACAATGTCCCGACAGCGCTATGTCGATGGTGCTGTCAACGTTAATCCAGCGGCAATGAATCTGCAGAGTATTAACTTTAATTCCATATAG
Protein Sequence: MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDAATLTKSDSKSSSEQPDQLQSSGSGTDSLWGSSESQFQQQQPQQHHHHHHHQQSQTQQLHQLRRTPSPLGAGTSPATRRKRLRKSSNNGSGDRTSDEHGVVDTGANINLSQMSQMSFGGNTTGLGHTLHTKIIKESTSVDVEAHQQDSSPDSLDDGHGHPHTMQIKPETDMSVPQTLPLDISGGTTPSEHDGPNASCSQSQSSHSGLQWTVVDSNYSRFSLSSCQANLIGNGNTNNPNNPNGNAGLSNQSANNQSNNGNQNPGDHQQQQQQQQQQQQQQHRQQQQNATNSNGNSSAAGGGGGGGGGGSGLGNPQQQQGHIQMHYQNSTYSPQIISVNSLVGSYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQMNTVPTGLTSAGGAGGPGTGNGASSSGGSNNAGNGASLGGSGGGTSVVNTSGNNATGVGSNNPVQSGNQTTQTTTKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRVVKQENLSPSPTPTNEETTIENYEHINQSAINMQVPPTSDTPTPLMCTPHTHPMGVMGFLDTRHMEFPTSIHTMSRQRYVDGAVNVNPAAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00310352; iTF_00313569; iTF_00312711; iTF_00313371; iTF_00312510; iTF_00311145; iTF_00310948; iTF_00688781; iTF_00688524; iTF_00694765; iTF_00694509; iTF_00240849; iTF_00240587; iTF_00984145; iTF_00724882; iTF_00724690; iTF_00311731; iTF_00311905; iTF_00665555; iTF_00665771; iTF_01542131; iTF_01541362; iTF_01541527; iTF_01542304; iTF_00315861; iTF_00316068; iTF_00664181; iTF_00663979; iTF_00672149; iTF_00672291; iTF_00426262; iTF_00426529; iTF_01522006; iTF_01521800; iTF_00314423; iTF_00314187; iTF_01254103; iTF_01253446; iTF_01521239; iTF_01520881; iTF_01211832; iTF_01212146; iTF_01299929; iTF_01116570; iTF_01116366; iTF_00389723; iTF_00389537; iTF_00670875; iTF_00671028; iTF_00991675; iTF_00991908; iTF_01223611; iTF_01223306; iTF_01396411; iTF_01396631; iTF_00188252; iTF_00187981; iTF_00664765; iTF_00664956; iTF_00974559; iTF_00974824; iTF_00315072; iTF_00315269;
90% Identity: iTF_00313569;
80% Identity: iTF_00310352;