Basic Information

Gene Symbol
ttk
Assembly
GCA_947049305.1
Location
CAMRIP010000176.1:742445-752679[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-18 2.7e-15 56.6 0.0 2 45 585 629 584 629 0.96

Sequence Information

Coding Sequence
ATGTCCGTGCAGCAATTCTGCTTGCGGTGGAACAATCACCAACCGAATTTTATTTCGGTGTGTTCATCGCTGCTGCATAATGGGACTTTGGTGGATGTAACCCTAGCAGCTGAAGGACGTCAGTTACAGGCGCACAAAATTGTCTTGTCCGCATGCAGCTCGTACTTCCAGACTCTTTTTACAACGAATCCATGTCAACATCCAATTGTCATACTGAAGGACGTCCAATACGACGATCTGAAGACAATGGTAGATTTTATGTACTACGGTGAGGTTAATGTGTCGCAAGAACAACTGCCGCACATTCTTAAAACGGCTGAGATGCTTAAAATCAAAGGCTTAGCCGAAATGCCCACCGACGCGGCGACCCTTACAAAGTCTGATAGTAAATCGTCGTCCGACCAGCCCGATCAACTGCAGAGCAGTGGGACTGATTCTTTATGGGGTAGTTCGGAGTCACAGtttcaacagcaacaacaacaaacgcAACCACATCATCATCACCACCATCATCAGCAGAGTCAAACGCAACAAATGCACCAGCTTAGGAGATCACCTTCACCACTTGGCACTGGTACCTCACCAGCCACACGAAGGAAACGACTAAGAAAGTCTTCAAATAATGgTTCCGGTGATCGAATTACGGATGATCACAGTGGAGTTGATACTGGAGGTAACATCAACTTATCCCAAATAGGTCAGATGTCATTTGGTGGTAATTCAAGTGGTCTAGGGCATactttacatacaaaaattataaaagagtCAACAAGTGTTGATGTTGATAGTCATCAGCAAGACTCTTCCCCCGATAGCTTAGACGATGGTAATGGCCATCCTCATGCTATGCAAATCaAACCCGAAACAGATTTGAGTGTTCCACAGACCCTACCATTGGATATTTCTGGAGGTACCACCCCTTCAGAGCATGATGGTCCGAACGCCAGTTGCTCACAGTCATCGCATTCAGGTCTGCAATGGACGGTCGTTGATTCAAATTATTCCCGATTTTCGCTGCCATCTTGTCAGCCCAATTTAATTGGTAATGGCAACGCAAACAATCCAAACGGAGGATTGAGTAATCAATCAACCAGCAACAACAACCCGAGCAATACTGGTAATCAAAATCCAACAGACcatcagcagcaacaacaacagcaacagcagcagcaacagcaacaacaacaacaacaacaacaacaacagcagcagcagcagcaacaacagcagcaacagcatCGACAACAGCAGCAAAATGCCAACAATTCAAATGGTAACAATTCCAGTGCAACAAGCGGACTAAGCCACACGCAACAACAACCGCAGCATGGTCATATTCAAATGCACTATACAAACTCCTCGTATTCGCCACAAATCATTTCCGTCAATAGTCTGGTGGGCAACTACTCGCAGAACCTATCGACGCCAACATCGCCAAATGAGTCGGCAATGGTGCAATCGGTGTACAGTCAGGGACCGACACCAACCCAATCGCCAGTCCATCAGATGAACACAGTTCCCTCGGGACTGACGACGACAACGGGCGCAAGTAACGCCGGGTCTGGTAGTGGTGCAGGTAATAGTGCCAATGCCAATAACACCGGAAGCAGTGGGTCACTGACCACTACTGTGGTTAACACAACAGGCAACAGCGGAACAAGTGTTGTCAACAATAGCCAAGTCCAGTCGGGCAACCAAACCACACAAACAACTATTGTAGTTAAACGTAAGCGCTCTGTAAATCCCCAAGGTGACGAAAACTTTATTCGGGCCCTCGAAGCGGTGCGATCGGGGGGAATTGGCTTTTGTAAGGCCGCCCGGCTTTACGGTGTGAATAACCGAACCTTATGGTTAGAGTACAAGAAGCGAGGATATCCCATCAGTCGGCCGAGTATAAAGAGTAGAGTAGTGAAGCAGGAGAATCTTTCGCCGTCGCCCACGCCCACAAACGAGGAAACAACGATCGAAAATTACGAGCACATCAACCAGTCAGCTATTAACATGCAAGTTCCTCCCACATCGGATACGCCCACGCCACTCATGTGCACCCCGCATACTCATCCCATGGGCGTGATGGGCTTCCTCGACACCAGGCACATGGACTTCCCAACCAGTATACACACAATGTCTCGACAGCGCTACGTCGATAGCGGTGTAAACGTTAATCCTTCTGCAATGAATCTGCAAAGTATTAACTTCAATTCCATTTAG
Protein Sequence
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDAATLTKSDSKSSSDQPDQLQSSGTDSLWGSSESQFQQQQQQTQPHHHHHHHQQSQTQQMHQLRRSPSPLGTGTSPATRRKRLRKSSNNGSGDRITDDHSGVDTGGNINLSQIGQMSFGGNSSGLGHTLHTKIIKESTSVDVDSHQQDSSPDSLDDGNGHPHAMQIKPETDLSVPQTLPLDISGGTTPSEHDGPNASCSQSSHSGLQWTVVDSNYSRFSLPSCQPNLIGNGNANNPNGGLSNQSTSNNNPSNTGNQNPTDHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHRQQQQNANNSNGNNSSATSGLSHTQQQPQHGHIQMHYTNSSYSPQIISVNSLVGNYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQMNTVPSGLTTTTGASNAGSGSGAGNSANANNTGSSGSLTTTVVNTTGNSGTSVVNNSQVQSGNQTTQTTIVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRVVKQENLSPSPTPTNEETTIENYEHINQSAINMQVPPTSDTPTPLMCTPHTHPMGVMGFLDTRHMDFPTSIHTMSRQRYVDSGVNVNPSAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00310171;
90% Identity
iTF_00188252;
80% Identity
iTF_00664956;