Eper008236.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- ttk
- Assembly
- GCA_907269125.1
- Location
- OU026147.1:53231845-53241050[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-19 1.3e-15 56.6 0.0 2 45 580 624 579 624 0.96
Sequence Information
- Coding Sequence
- ATGTCCGTGCAGCAATTTTGCTTGCGGTGGAACAACCACCAACCGAATTTTATTTCGGTATGTTCCTCGCTGCTGCACAATGGGACGCTGGTGGATGTAACCCTGGCGGCTGAAGGACGTCAGCTTCAGGCGCACAAAATTGTTTTGTCCGCATGCAGCTCGTACTTTCAGacTCTCTTTACAACGAATCCATGTCAACATCCGATTGTTATACTTAAGGATGTCCAATATGATGACCTCAAGACAATGGTCGATTTTATGTACTACGGTGAGGTGAATGTGTCGCAAGAGCAATTACCGCACATTCTTAAAACGGCTGAAATGCTTAAGATCAAGGGACTAGCCGAAATGCCCACCGATGCAGCGACTCTAACAAAATCCGAAAGTAAATCGTCATCAGAACAACCTGATCAATTACAAAGCAGTGGCAGCGGAACAGACTCATTATGGGGAAGTTCAGAATCACAATTTCAACAACAGCAAccgcatcatcatcagcagcatcatcatcatcagcaaagTCAAACACAACAGTTACATCAGTTGAGACGAACTCCATCGCCCCTAGGTGCTGGAACTTCACCGGCTACACGAAGGAAACGTTTAAGAAAATCTTCAAATAATGGGTCTGGTGATCGCACTTCAGATGAGCATGGCGGAGTCGACGCCGGGGCAAATATCAATATATCTCAAATGAATCCAATATCATTTGGTGGCAATGCGAGTGGTCTAGGACATACCTTGCATACGAAAATCATAAAAGAGTCAGGCAGCGCTGATGTTGAAACCCATCAGCAGGACTCATCACCTGATAGTTTGGACGATGGTCACCATCCTCATACTATGcaaattAAACCCGAAACGGATTTAAGTGTTCCGCAATCCCTGCCCTTGGATATTTCGGGAGGCACAACACCATCGGAACATGATGGTCCAAATGCCAGTTGTTCACAGTCCCAGTCATCCCATTCAGGTCTGCAATGGACGGTCGTTGATTCAAATTATTCCCGATTTTCGCTGCCGTCTTGTCAGCCCAATTTAATTGGTAATGGCAATACCAACAACTCGAATAATCCGAATGGCAATACCGGATTGAGTAATCAATCAACCAACAATCCAAGCAACAATGGAAATCAAAATCAAAGTGaacatcagcaacaacagcagcaacagcagcagcaacaacaacagcagcagcaacagcaacaacatcgacagcaacagcagaatGCGAACAATTCAAACGGAAATTCCAGTGCAACAGGTGGCGGCCTCGGTAACccccagcaacagcaacagcagggTCACATTCAAATGCACTATCAGAATTCAACGTATTCACCACAAATTATCTCCGTCAATAGTCTTGTTAGTAGCTACTCACAAAACCTATCGACCCCAACATCCCCAAATGAGTCGGCAATGGTGCAATCGGTGTATAGCCAAGGGCCAACACCAACGCAATCGCCAGTTCATCAAATGAACACAGTTCCATCCGGACTCACATCTGGCGGTGGATCGGGTGGCCCCGGACCAGGTAGTGGTGCAAGTACGagtggcagcggcggcggtggtccCAATAATGCGGGCAATGGCGCGTCGCTTGGTGGCAATAATACAAGTGTAGTTAATACAGCAGGTGGCAGTGGCACTGGCGTTGGGAGCAGTAATCAAGTTCAAGCAAGTCAAACAACCCAAACAGTAGTAAAACGCAAGCGTTCAGTTAATCCACAAGGTGATGAGAATTTCATTCGAGCTTTAGAAGCAGTGCGATCCGGTGGAATTGGTTTTTGCAAAGCGGCCCGCTTGTACGGCGTCAATAATCGCACACTGTGGCTAGAATATAAGAAACGGGGGTACCCAATCAGTCGACCAAGTATTAAGAGTCGCGTGGTGAAACAAGAGAATCTGTCACCGTCGCCAACCCCCACCAATGAGGAGACCACTATTGAAAATTATGAGCACATCAACCAACCAGCTATTAATATGCAAGTTCCTCCAACATCGGATACTCCGACGCCACTCATGTGCACCCCGCACACCCATCCTATGGGCGTGATGAATTTCTTAGACACCCGACACATGGAGTTTCCCGGCAGTATACACACAATGTCACGACAACGCTACGTTGATGGCGCTGTAAATGTAAATCCTGCGGCAATGAATCTGCAAAGTATTAACTTTAATTCCATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDAATLTKSESKSSSEQPDQLQSSGSGTDSLWGSSESQFQQQQPHHHQQHHHHQQSQTQQLHQLRRTPSPLGAGTSPATRRKRLRKSSNNGSGDRTSDEHGGVDAGANINISQMNPISFGGNASGLGHTLHTKIIKESGSADVETHQQDSSPDSLDDGHHPHTMQIKPETDLSVPQSLPLDISGGTTPSEHDGPNASCSQSQSSHSGLQWTVVDSNYSRFSLPSCQPNLIGNGNTNNSNNPNGNTGLSNQSTNNPSNNGNQNQSEHQQQQQQQQQQQQQQQQQQQHRQQQQNANNSNGNSSATGGGLGNPQQQQQQGHIQMHYQNSTYSPQIISVNSLVSSYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQMNTVPSGLTSGGGSGGPGPGSGASTSGSGGGGPNNAGNGASLGGNNTSVVNTAGGSGTGVGSSNQVQASQTTQTVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRVVKQENLSPSPTPTNEETTIENYEHINQPAINMQVPPTSDTPTPLMCTPHTHPMGVMNFLDTRHMEFPGSIHTMSRQRYVDGAVNVNPAAMNLQSINFNSI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00310171;
- 90% Identity
- iTF_00313569;
- 80% Identity
- iTF_00672291;