Vina016384.1
Basic Information
- Insect
- Volucella inanis
- Gene Symbol
- lolal
- Assembly
- GCA_907269105.1
- Location
- OU026154.1:132242689-132253316[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-18 3e-15 56.7 0.0 2 45 557 601 556 601 0.96
Sequence Information
- Coding Sequence
- ATGCTGGCCTACAAAGACCTGTTCATACGAGTGAGATTCTTAACATTACCGAGGACACTTTTCACAACGAATCCATGTCAACATCCGATAGTTATACTAAAAGATGTTCAATACGATGACCTCAAAACAATGGTTGATTTTATGTACTATGGGGAGGTTAATGTGTCGCAAGAGCAATTACCGCACATTCTTAAAACGGCTGAAATGCTTAAAATCAAAGGTTTAGCCGAGATGCCCACCGATGCGGCGACTCTCACAAAATCGGACAGTAAATCATCATCAGAACAACCTGATCAACTGCAAAGCAGTGGTGGTAGTGGTACTGACTCATTATGGGGCAGTTCCGAGTCACAATTTCAACAGCAACAACCGCAACAACAtcaccaccatcatcatcatcagcaaagTCAGACGCAGCAAATGCATCAGCTAAGGAGAACACCATCCCCGCTAGGTTCTGGCACTTCACCGGCCACCCGAAGGAAACGACTAAGAAAGTCGTCAAACAATGgtTCTGGTGATCGCACTTCGGATGAGCACGGTGGTGTCGATAATGGATCAAATATCAATCTATCCCAAATGAGTCAAATGTCATTTGGTGGTAATACAGGTGGCTTAGGTCATACTTTGCAtacgaaaattataaaagaatcaGCCAGTGTTGATGTTGAAACCCACCAGCAGGATTCATCACCCGATAGTTTGGATGATGGTCATGGCCACCCACACACTATGCAAATCAAACCCGAAGCAGATATAAACGTTCCGCAGACCCTGCCCTTGGATATATCTGGGGGCACGACTCCTTCAGAGCATGATGGCCCAAATGCGAGCTGCTCCCAATCACAATCATCGCATTCAGGTCTGCAATGGACGGTCGTTGATTCAAATTATTCCCGATTTTCGCTGTCATCTTGCCAGGCTAATTTAATTGGCAACGGCAACACGAACAACCCCAATAATCCGAATGGCAATGGCGGATTAAGTAATCAATCGACCAACAACCCGAGCAACAGTGGAAATCAAAATACTGGCGATcaccagcagcaacagcaacaacaacagcaacagcaacaacagcagcaacagcaacaacaacagcaacagcatcgacaacaacaacagcaaaatgCAAATAATTCGAATGGTAATTCCAGTGCAGCCGGAAGTGCAGGTAGTAGTGGTAATGGTGGATTAGGTAATccacaacagcaacagcagcaacaacaacagcaaggaCATATTCAAATGCACTATCCAAATTCAACGTATTCACCACAAATCATTTCCGTCAATAGTCTGGTCGGCAGCTATTCACAAAACCTATCGACGCCAACGTCTCCAAATGAGTCGGCAATGGTGCAATCGGTGTATAGTCAAGGACCTACACCAACTCAATCGCCAGTCCATCAAATGAATACAGTCCCATCGGGAATGACGTCCGCCGGAGGTACAACCGGACAAGTAACTGGAAGCAGTGCAAGCAGTAGTGGTGGTGGTCCGAATAATAGTGGCAATGCTACTTCAATGGGTGGAAGTGGGACAAGCGTAGTTAATACAACCGGTAGTGGTGGTGCAGCTGTAGGCAGCAATATTCAAATCCAATCGGGTAGTCAAACTACACAAACAACGACGGTTAAACGTAAAAGATCGGTAAATCCACAAGGAGATGAAAACTTTATACGAGCTCTGGAAGCAGTTCGATCTGGTGGCATTGGCTTTTGTAAGGCAGCTCGCCTCTATGGCGTTAATAATCGCACACTTTGGTTAGAATATAAAAAGCGTGGTTATCCGATTAGTCGACCAAGTATTAAAAGTCGAGTGGTAAAGCAAGAAAATCTATCACCATCACCGACGCCCACCAATGAAGAGACAACTATTGAAAATTACGAGCACATTAACCAGTCAGCTATTAATATGCAAGTTCCTCCCACATCGGATACACCAACATCGCTCATGTGTACGCCGCATACGCATCCAATGGGTGTTATGGGATTTTTAGATACCCGTCATATGGAGTTTCCCGCCAGCATACATACAATGTCGCGACAGCGCTATGTCGATGGTGCTGTGAATGTTAATCCTGCGGCAATGAATCTGCAAAGTATTAACTTTAATTCCATATAG
- Protein Sequence
- MLAYKDLFIRVRFLTLPRTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDAATLTKSDSKSSSEQPDQLQSSGGSGTDSLWGSSESQFQQQQPQQHHHHHHHQQSQTQQMHQLRRTPSPLGSGTSPATRRKRLRKSSNNGSGDRTSDEHGGVDNGSNINLSQMSQMSFGGNTGGLGHTLHTKIIKESASVDVETHQQDSSPDSLDDGHGHPHTMQIKPEADINVPQTLPLDISGGTTPSEHDGPNASCSQSQSSHSGLQWTVVDSNYSRFSLSSCQANLIGNGNTNNPNNPNGNGGLSNQSTNNPSNSGNQNTGDHQQQQQQQQQQQQQQQQQQQQQQHRQQQQQNANNSNGNSSAAGSAGSSGNGGLGNPQQQQQQQQQQGHIQMHYPNSTYSPQIISVNSLVGSYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQMNTVPSGMTSAGGTTGQVTGSSASSSGGGPNNSGNATSMGGSGTSVVNTTGSGGAAVGSNIQIQSGSQTTQTTTVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRVVKQENLSPSPTPTNEETTIENYEHINQSAINMQVPPTSDTPTSLMCTPHTHPMGVMGFLDTRHMEFPASIHTMSRQRYVDGAVNVNPAAMNLQSINFNSI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00310171;
- 90% Identity
- iTF_01521239;
- 80% Identity
- iTF_01522006;