Belo033000.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- ttk
- Assembly
- GCA_951217065.1
- Location
- OX578272.1:165501302-165512569[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-18 4.9e-15 56.6 0.0 2 45 583 627 582 627 0.96
Sequence Information
- Coding Sequence
- ATGTCCGTGCAGCAATTCTGCTTGCGGTGGAACAATCACCAGCCGAATTTTATCTCGGTTTGTTCCTCGTTGCTGCATAATGGGACTTTGGTGGATGTAACCTTAGCGGCTGAAGGACGTCAGTTACAGGCGCACAAAATTGTTTTGTCCGCATGCAGCTCGTACTTCCAGACTCTTTTTACAACGAATCCATGTCAACATCCAATTGTTATACTAAAGGACGTTCAATACGACGACCTTAAAACGATGGTAGACTTTATGTACTACGGTGAGGTGAATGTATCGCAAGAACAATTGCCGCACATTCTTAAAACGGCAGAAATGCTTAAAATAAAAGGTTTGGCTGAGATGCCCACCGATGCGGCGACTCTAACAAAGTCCGATAGTAAATCGTCGTCCGATCCACCCGATCAACTGCAGAGCAGTGGGACTGATTCTCTGTGGGGCAGTTCTGAGTCACAAtttcaacagcaacaaccgcaacaacatCATCACCACCACCATCATCAGCAAAGTCAAACGCAACAAATGCACCAGCTAAGGAGATCGCCCTCGCCCCTTGGTACTGGTACCTCACCAGCCACACGAAGGAAACGGCTAAGAAAGTCTTCAAATAATGgTTCTGGTGATCGCGTTACCGATGATCACAGTGGAGTTGACACCGGAGGTAATATCAACCTATCACAAATGGGTCAGATGTCATTTGGTGGAAATTCAAGTGGTCTTGGACATACTATgcacacaaaaattataaaagagtCAACAAGCGTTGATGTTGATAGTCATCAGCAAGACTCATCCCCCGATAGTTTAGATGATGGTCATGGCCATCCTCATACTATGCAAATCAAACCCGAATCGGATTTGAGTGTTCCACAGACCCTGCCCTTGGATATTTCTGGAGGCACTACTCCTTCAGAGCATGATGGCCCTAATGCCAGTTGCTCACAGTCATCGCATTCAGGTCTGCAATGGACGGTCGTTGATTCAAATTATTCCCGATTTTCGCTGTCATCTTGTCAGCCCAATTTAATTGGCAATGGCAATACCAACAATCCAAATGGAGGATTGAGTAATCAATcaaccaacaacaccaacaacccAAGCAATAATGGAAATCAAAACACAACGGACcaccagcaacaacagcagcagcaacaacaacaacaacaacagcaacaacaacaacagcaacaacaacaacagcaacaacaacagcaacagcatcGACAACAGCAGCAAAACGCCAATAATCCAAATGGCAACTCCAGTGCAACTAGTGGACTCGGCAATACCCAACAGCAGCCTCAGCATGGTCATATTCAAATGCACTATACGAATTCATCGTATTCGCCACAAATCATTTCCGTCAATAGTCTGGTGGGCAGCTACTCGCAGAACCTATCGACGCCAACGTCGCCGAATGAGTCGGCAATGGTGCAATCGGTGTACAGTCAGGGACCGACACCTACCCAATCGCCAGTCCACCAAATGAACACAGTTCCCTCGGGACTGACGACGACAGGGGGTTCGGGCAATACTGGTTCTGGTAGTGGTGCAGTCAGCAGTGCTAATGGCAATAACACTGGAAACAGTGGATCACTCGGTGCAAATACCACGACCGTGGTTAACACTGCAGGTAACAGCGGAACAGGTGTAGTCAACAATAGCCAAGTCCAGTCGGGCAATCAAACCACACAAACGACGATAGTTGTAAAGCGCAAGCGCTCTGTAAATCCTCAGGGCGATGAAAACTTTATAAGGGCCCTCGAAGCAGTGCGATCTGGTGGAATTGGTTTTTGTAAAGCTGCCCGTCTTTATGGTGTAAACAACCGAACCCTTTGGCTGGAGTACAAGAAGCGTGGCTATCCCATTAGTCGGCCGAGCATCAAAAGTCGTGTAGTCAAGCAGGAGAACCTCTCGCCGTCGCCGACGCCCACCAATGAGGAAACAACTATCGAAAACTACGAGCACATTAACCAGTCAGCTATTAACATGCAAGTTCCTCCCACATCGGATACGCCCACACCACTTATGTGCACTCCGCACACACATCCCATGGGCGTGATGGGTTTTCTCGATACCAGACATATGGACTTCCCAACCAGTATACACACAATGTCTCGACAGCGCTACGTTGATAGCGCGGTCAACGTTAATCCTTCGGCAATGAATCTGCAAAGTATTAACTTCAATTCCATTTAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDAATLTKSDSKSSSDPPDQLQSSGTDSLWGSSESQFQQQQPQQHHHHHHHQQSQTQQMHQLRRSPSPLGTGTSPATRRKRLRKSSNNGSGDRVTDDHSGVDTGGNINLSQMGQMSFGGNSSGLGHTMHTKIIKESTSVDVDSHQQDSSPDSLDDGHGHPHTMQIKPESDLSVPQTLPLDISGGTTPSEHDGPNASCSQSSHSGLQWTVVDSNYSRFSLSSCQPNLIGNGNTNNPNGGLSNQSTNNTNNPSNNGNQNTTDHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHRQQQQNANNPNGNSSATSGLGNTQQQPQHGHIQMHYTNSSYSPQIISVNSLVGSYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQMNTVPSGLTTTGGSGNTGSGSGAVSSANGNNTGNSGSLGANTTTVVNTAGNSGTGVVNNSQVQSGNQTTQTTIVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRVVKQENLSPSPTPTNEETTIENYEHINQSAINMQVPPTSDTPTPLMCTPHTHPMGVMGFLDTRHMDFPTSIHTMSRQRYVDSAVNVNPSAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00310171;
- 90% Identity
- iTF_00188252;
- 80% Identity
- iTF_00188252;